RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 FAM87AP0C7U9 286 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 CD53P19397 219 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 MSR1P21757 451 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 OPRL1P41146 370 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 KIR3DL2P43630 455 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 MFGE8Q08431 387 aaPredicted RBP6.13□□□□□ -1.43
PTCD2-201ENST00000308077 ALKBH1Q13686 389 aaKnown RBP6.13□□□□□ -1.43
PTCD2-201ENST00000308077 INAQ16352 499 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 SGCAQ16586 387 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 CEACAM16Q2WEN9 425 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 KCTD18Q6PI47 426 aaPredicted RBP6.13□□□□□ -1.43
PTCD2-201ENST00000308077 KRT77Q7Z794 578 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 EGFL6Q8IUX8 553 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 GPR137CQ8N3F9 429 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 PRSS35Q8N3Z0 413 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 KBTBD8Q8NFY9 601 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 RNF133Q8WVZ7 376 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 SARAFQ96BY9 339 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 SLAMF6Q96DU3 332 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 CDADC1Q9BWV3 514 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 MROQ9BYG7 248 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 SLIRPQ9GZT3 109 aaKnown RBP6.13□□□□□ -1.43
PTCD2-201ENST00000308077 PPIL3Q9H2H8 161 aaKnown RBP6.13□□□□□ -1.43
PTCD2-201ENST00000308077 SLCO5A1Q9H2Y9 848 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 GPR35Q9HC97 309 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 PNRC2Q9NPJ4 139 aaKnown RBP6.13□□□□□ -1.43
PTCD2-201ENST00000308077 SLC7A10Q9NS82 523 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 EMC3Q9P0I2 261 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 ASH2LQ9UBL3 628 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 POLR1DQ9Y2S0 133 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 ZNF175Q9Y473 711 aa6.13□□□□□ -1.43
PTCD2-201ENST00000308077 SVILO95425 2214 aa6.12□□□□□ -1.43
PTCD2-201ENST00000308077 A0A1B0GVG6 124 aa6.12□□□□□ -1.43
PTCD2-201ENST00000308077 HSPB2A8KAH6 182 aa6.12□□□□□ -1.43
PTCD2-201ENST00000308077 RER1O15258 196 aa6.12□□□□□ -1.43
PTCD2-201ENST00000308077 TMCC2O75069 709 aa6.12□□□□□ -1.43
PTCD2-201ENST00000308077 ZFPL1O95159 310 aa6.12□□□□□ -1.43
PTCD2-201ENST00000308077 AGTR1P30556 359 aa6.12□□□□□ -1.43
PTCD2-201ENST00000308077 RPS19P39019 145 aaKnown RBP6.12□□□□□ -1.43
PTCD2-201ENST00000308077 ZNF84P51523 738 aa6.12□□□□□ -1.43
PTCD2-201ENST00000308077 RIDAP52758 137 aaKnown RBP6.12□□□□□ -1.43
PTCD2-201ENST00000308077 FOXG1P55316 489 aaPredicted RBP6.12□□□□□ -1.43
PTCD2-201ENST00000308077 LSM6P62312 80 aaKnown RBP6.12□□□□□ -1.43
PTCD2-201ENST00000308077 MRPS34P82930 218 aaKnown RBP6.12□□□□□ -1.43
PTCD2-201ENST00000308077 ROR2Q01974 943 aaKnown RBP6.12□□□□□ -1.43
PTCD2-201ENST00000308077 HSPB2Q16082 182 aa6.12□□□□□ -1.43
PTCD2-201ENST00000308077 WDR38Q5JTN6 314 aa6.12□□□□□ -1.43
PTCD2-201ENST00000308077 FAM27D1Q5T7N8 215 aa6.12□□□□□ -1.43
PTCD2-201ENST00000308077 RIPPLY2Q5TAB7 128 aa6.12□□□□□ -1.43
PTCD2-201ENST00000308077 ZNF324BQ6AW86 544 aaPredicted RBP6.12□□□□□ -1.43
PTCD2-201ENST00000308077 FDX2Q6P4F2 183 aa6.12□□□□□ -1.43
PTCD2-201ENST00000308077 MCEMP1Q8IX19 187 aa6.12□□□□□ -1.43
PTCD2-201ENST00000308077 LRRC18Q8N456 261 aa6.12□□□□□ -1.43
PTCD2-201ENST00000308077 OR2G2Q8NGZ5 317 aa6.12□□□□□ -1.43
PTCD2-201ENST00000308077 ABHD4Q8TB40 342 aa6.12□□□□□ -1.43
PTCD2-201ENST00000308077 CPT1CQ8TCG5 803 aa6.12□□□□□ -1.43
PTCD2-201ENST00000308077 PPP1R14AQ96A00 147 aa6.12□□□□□ -1.43
PTCD2-201ENST00000308077 C4orf45Q96LM5 186 aa6.12□□□□□ -1.43
PTCD2-201ENST00000308077 GPR137Q96N19 417 aa6.12□□□□□ -1.43
PTCD2-201ENST00000308077 TRIB1Q96RU8 372 aa6.12□□□□□ -1.43
PTCD2-201ENST00000308077 LINC00470Q9BZP3 86 aa6.12□□□□□ -1.43
PTCD2-201ENST00000308077 C1orf198Q9H425 327 aa6.12□□□□□ -1.43
PTCD2-201ENST00000308077 TMEM38BQ9NVV0 291 aa6.12□□□□□ -1.43
PTCD2-201ENST00000308077 OR4C45A6NMZ5 311 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 CDRT1O95170 752 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 CRYABP02511 175 aaKnown RBP6.11□□□□□ -1.43
PTCD2-201ENST00000308077 B4GALT1P15291 398 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 GALP22466 123 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 ANOS1P23352 680 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 SDC2P34741 201 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 MAGEB1P43366 347 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 TUBA1BP68363 451 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 MRPL28Q13084 256 aaKnown RBP6.11□□□□□ -1.43
PTCD2-201ENST00000308077 GUSBP1Q15486 140 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 TRAM1Q15629 374 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 TUBA1AQ71U36 451 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 CATSPERDQ86XM0 798 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 IL17RDQ8NFM7 739 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 OR2AJ1Q8NGZ0 328 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 FBXO17Q96EF6 278 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 KCTD7Q96MP8 289 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 DACH2Q96NX9 599 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 COQ7Q99807 217 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 FOXB1Q99853 325 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 SH3GL3Q99963 347 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 BARHL1Q9BZE3 327 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 B3GAT2Q9NPZ5 323 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 CENPMQ9NSP4 180 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 PARPBPQ9NWS1 579 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 GALNT8Q9NY28 637 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 CCDC59Q9P031 241 aaKnown RBP6.11□□□□□ -1.43
PTCD2-201ENST00000308077 PRSS50Q9UI38 385 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 SLC22A13Q9Y226 551 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 DOCK7Q96N67 2140 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 MED13LQ71F56 2210 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 GTF3C1Q12789 2109 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 SMIM30A4D0T7 59 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 OR14I1A6ND48 311 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 RPL36A-HNRNPH2H7BZ11 118 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 SS18L1O75177 396 aaPredicted RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms