RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 ZNF346Q9UL40 294 aaKnown RBP11.55□□□□□ -0.56
USP38-201ENST00000307017 PRSS44E7EML9 344 aa11.55□□□□□ -0.56
USP38-201ENST00000307017 OR8G1Q15617 311 aa11.55□□□□□ -0.56
USP38-201ENST00000307017 CREB3L2Q70SY1 520 aa11.55□□□□□ -0.56
USP38-201ENST00000307017 SLC22A24Q8N4F4 322 aa11.55□□□□□ -0.56
USP38-201ENST00000307017 OR51F2Q8NH61 342 aa11.55□□□□□ -0.56
USP38-201ENST00000307017 MAP6Q96JE9 813 aa11.55□□□□□ -0.56
USP38-201ENST00000307017 HES7Q9BYE0 225 aa11.55□□□□□ -0.56
USP38-201ENST00000307017 RCL1Q9Y2P8 373 aaKnown RBP11.55□□□□□ -0.56
USP38-201ENST00000307017 ASCC3Q8N3C0 2202 aaKnown RBP11.55□□□□□ -0.56
USP38-201ENST00000307017 ZNF732B4DXR9 585 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 CD3DP04234 171 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 MRPS10P82664 201 aaKnown RBP11.54□□□□□ -0.56
USP38-201ENST00000307017 OR2T2Q6IF00 324 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 GAREM2Q75VX8 874 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 BLNKQ8WV28 456 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 EPHX3Q9H6B9 360 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 C20orf202A1L168 122 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 AQP8O94778 261 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 GLSO94925 669 aaPredicted RBP11.54□□□□□ -0.56
USP38-201ENST00000307017 SLC25A4P12235 298 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 ZNF26P17031 533 aaPredicted RBP11.54□□□□□ -0.56
USP38-201ENST00000307017 SLC6A12P48065 614 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 RPS4XP62701 263 aaKnown RBP11.54□□□□□ -0.56
USP38-201ENST00000307017 SRSF5Q13243 272 aaKnown RBP11.54□□□□□ -0.56
USP38-201ENST00000307017 NAXDQ8IW45 347 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 OR1J2Q8NGS2 313 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 ARRDC2Q8TBH0 407 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 RTP4Q96DX8 246 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 ZBED3Q96IU2 234 aaPredicted RBP11.54□□□□□ -0.56
USP38-201ENST00000307017 CACNA1SQ13698 1873 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 RFPL4AA6NLU0 287 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 RFPL4AL1F8VTS6 287 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 CST7O76096 145 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 SCGB1C2P0DMR2 95 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 ADGRE4PQ86SQ3 457 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 ASB17Q8WXJ9 295 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 NXPE3Q969Y0 559 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 SLCO4A1Q96BD0 722 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 FBXO17Q96EF6 278 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 DERL3Q96Q80 235 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 STACQ99469 402 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 DOK5Q9P104 306 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 NPTNQ9Y639 398 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 CCDC187A0A096LP49 1063 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 LOC102723971A0A1B0GUV8 181 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 LRP3O75074 770 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 OR2T7P0C7T2 308 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 CT45A6P0DMU7 189 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 CT45A5P0DMU8 189 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 CT45A7P0DMV0 189 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 CT45A8P0DMV1 189 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 CT45A9P0DMV2 189 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 CTSAP10619 480 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 FGF7P21781 194 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 CT45A2Q5DJT8 189 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 CT45A1Q5HYN5 189 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 CT45A3Q8NHU0 189 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 LRFN3Q9BTN0 628 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 ZFP57Q9NU63 452 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 R4GN57 208 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 C5P01031 1676 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 PPP5D1E7EU14 171 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 CDC14BO60729 498 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 DTYMKP23919 212 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 LIM2P55344 173 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 C11orf91Q3C1V1 193 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 ISL2Q96A47 359 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 SLC25A46Q96AG3 418 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 ACY3Q96HD9 319 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 C20orf141Q9NUB4 165 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 FLVCR1Q9Y5Y0 555 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 ZNF727A8MUV8 499 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 IDSB3KWA1 339 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 HTN1P15515 57 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 USF1P22415 310 aaPredicted RBP11.54□□□□□ -0.56
USP38-201ENST00000307017 TCEAL1Q15170 157 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 AANATQ16613 207 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 NXNL2Q5VZ03 156 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 FAM117AQ9C073 453 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 Q9Y3F1 56 aa11.54□□□□□ -0.56
USP38-201ENST00000307017 URB1O60287 2271 aaKnown RBP11.53□□□□□ -0.56
USP38-201ENST00000307017 PLPP1O14494 284 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 SPINT2O43291 252 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 ICOSLGO75144 302 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 POU3F3P20264 500 aaPredicted RBP11.53□□□□□ -0.56
USP38-201ENST00000307017 DUSP1P28562 367 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 SLC16A13Q7RTY0 426 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 ROBO4Q8WZ75 1007 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 MON2Q7Z3U7 1717 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 N4BP2Q86UW6 1770 aaPredicted RBP11.53□□□□□ -0.56
USP38-201ENST00000307017 HCRTR1O43613 425 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 SOD1P00441 154 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 GYPAP02724 150 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 NKX2-1P43699 371 aaPredicted RBP11.53□□□□□ -0.56
USP38-201ENST00000307017 CATR1Q13166 79 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 DHRS7BQ6IAN0 325 aaPredicted RBP11.53□□□□□ -0.56
USP38-201ENST00000307017 MAMSTRQ6ZN01 415 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 WBP2Q969T9 261 aa11.53□□□□□ -0.56
USP38-201ENST00000307017 SRPK3Q9UPE1 567 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms