RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 SYNGR3O43761 229 aa21.21■□□□□ 0.99
HOXC9-201ENST00000303450 GNAO1P09471 354 aa21.21■□□□□ 0.99
HOXC9-201ENST00000303450 COX5BP10606 129 aa21.21■□□□□ 0.99
HOXC9-201ENST00000303450 CCNOP22674 350 aa21.21■□□□□ 0.99
HOXC9-201ENST00000303450 CALCRP30988 508 aa21.21■□□□□ 0.99
HOXC9-201ENST00000303450 HSPA13P48723 471 aa21.21■□□□□ 0.99
HOXC9-201ENST00000303450 TMED1Q13445 227 aa21.21■□□□□ 0.99
HOXC9-201ENST00000303450 EIF2B1Q14232 305 aaKnown RBP21.21■□□□□ 0.99
HOXC9-201ENST00000303450 MAD2L1BPQ15013 274 aaPredicted RBP21.21■□□□□ 0.99
HOXC9-201ENST00000303450 C8orf59Q8N0T1 100 aaPredicted RBP21.21■□□□□ 0.99
HOXC9-201ENST00000303450 KBTBD8Q8NFY9 601 aa21.21■□□□□ 0.99
HOXC9-201ENST00000303450 OR1F12Q8NHA8 337 aa21.21■□□□□ 0.99
HOXC9-201ENST00000303450 MAP6Q96JE9 813 aa21.21■□□□□ 0.99
HOXC9-201ENST00000303450 C5orf49A4QMS7 147 aa21.2■□□□□ 0.98
HOXC9-201ENST00000303450 SHISA9B4DS77 424 aa21.2■□□□□ 0.98
HOXC9-201ENST00000303450 ZNF35P13682 527 aa21.2■□□□□ 0.98
HOXC9-201ENST00000303450 GALK2Q01415 458 aa21.2■□□□□ 0.98
HOXC9-201ENST00000303450 SNCBQ16143 134 aa21.2■□□□□ 0.98
HOXC9-201ENST00000303450 ZNF454Q8N9F8 522 aa21.2■□□□□ 0.98
HOXC9-201ENST00000303450 OR51G2Q8NGK0 314 aa21.2■□□□□ 0.98
HOXC9-201ENST00000303450 OTOSQ8NHW6 89 aa21.2■□□□□ 0.98
HOXC9-201ENST00000303450 POM121L2Q96KW2 1035 aa21.2■□□□□ 0.98
HOXC9-201ENST00000303450 YIPF3Q9GZM5 350 aa21.2■□□□□ 0.98
HOXC9-201ENST00000303450 HSPE1-MOB4S4R3N1 261 aa21.2■□□□□ 0.98
HOXC9-201ENST00000303450 LOC100509620A0A075B734 347 aa21.19■□□□□ 0.98
HOXC9-201ENST00000303450 OR6C6A6NF89 314 aa21.19■□□□□ 0.98
HOXC9-201ENST00000303450 PRF1P14222 555 aa21.19■□□□□ 0.98
HOXC9-201ENST00000303450 ATP6V1E1P36543 226 aa21.19■□□□□ 0.98
HOXC9-201ENST00000303450 ISL1P61371 349 aa21.19■□□□□ 0.98
HOXC9-201ENST00000303450 POU4F2Q12837 409 aa21.19■□□□□ 0.98
HOXC9-201ENST00000303450 CDC20BQ86Y33 519 aa21.19■□□□□ 0.98
HOXC9-201ENST00000303450 SMAP2Q8WU79 429 aaPredicted RBP21.19■□□□□ 0.98
HOXC9-201ENST00000303450 ATF6BQ99941 703 aa21.19■□□□□ 0.98
HOXC9-201ENST00000303450 ADGRL4Q9HBW9 690 aa21.19■□□□□ 0.98
HOXC9-201ENST00000303450 ATPIF1Q9UII2 106 aa21.19■□□□□ 0.98
HOXC9-201ENST00000303450 LAMP5Q9UJQ1 280 aa21.19■□□□□ 0.98
HOXC9-201ENST00000303450 ATP23Q9Y6H3 246 aa21.19■□□□□ 0.98
HOXC9-201ENST00000303450 A0A1W2PPR1 153 aa21.19■□□□□ 0.98
HOXC9-201ENST00000303450 MTNR1AP48039 350 aa21.19■□□□□ 0.98
HOXC9-201ENST00000303450 ECH1Q13011 328 aa21.19■□□□□ 0.98
HOXC9-201ENST00000303450 USP51Q70EK9 711 aa21.19■□□□□ 0.98
HOXC9-201ENST00000303450 PAQR4Q8N4S7 273 aaPredicted RBP21.19■□□□□ 0.98
HOXC9-201ENST00000303450 OR4F15Q8NGB8 312 aa21.19■□□□□ 0.98
HOXC9-201ENST00000303450 ST7LQ8TDW4 575 aa21.19■□□□□ 0.98
HOXC9-201ENST00000303450 THEM6Q8WUY1 208 aa21.19■□□□□ 0.98
HOXC9-201ENST00000303450 APH1BQ8WW43 257 aa21.19■□□□□ 0.98
HOXC9-201ENST00000303450 SLAMF6Q96DU3 332 aa21.19■□□□□ 0.98
HOXC9-201ENST00000303450 COQ7Q99807 217 aa21.19■□□□□ 0.98
HOXC9-201ENST00000303450 ABHD6Q9BV23 337 aa21.19■□□□□ 0.98
HOXC9-201ENST00000303450 PNRC2Q9NPJ4 139 aaKnown RBP21.19■□□□□ 0.98
HOXC9-201ENST00000303450 SPEF1Q9Y4P9 236 aa21.19■□□□□ 0.98
HOXC9-201ENST00000303450 FLNBO75369 2602 aaKnown RBP21.18■□□□□ 0.98
HOXC9-201ENST00000303450 LYNP07948 512 aa21.18■□□□□ 0.98
HOXC9-201ENST00000303450 SBK2P0C263 348 aa21.18■□□□□ 0.98
HOXC9-201ENST00000303450 HCCSP53701 268 aa21.18■□□□□ 0.98
HOXC9-201ENST00000303450 ZNF672Q499Z4 452 aaPredicted RBP21.18■□□□□ 0.98
HOXC9-201ENST00000303450 OR10S1Q8NGN2 331 aa21.18■□□□□ 0.98
HOXC9-201ENST00000303450 CNIH3Q8TBE1 160 aa21.18■□□□□ 0.98
HOXC9-201ENST00000303450 SLC7A6Q92536 515 aa21.18■□□□□ 0.98
HOXC9-201ENST00000303450 AKAP1Q92667 903 aaKnown RBP eCLIP21.18■□□□□ 0.98
HOXC9-201ENST00000303450 NEUROG1Q92886 237 aa21.18■□□□□ 0.98
HOXC9-201ENST00000303450 RNFT2Q96EX2 444 aa21.18■□□□□ 0.98
HOXC9-201ENST00000303450 RASSF4Q9H2L5 321 aa21.18■□□□□ 0.98
HOXC9-201ENST00000303450 CENPMQ9NSP4 180 aa21.18■□□□□ 0.98
HOXC9-201ENST00000303450 TMEM14AQ9Y6G1 99 aa21.18■□□□□ 0.98
HOXC9-201ENST00000303450 PLCE1Q9P212 2302 aa21.17■□□□□ 0.98
HOXC9-201ENST00000303450 ASH1LQ9NR48 2969 aaKnown RBP21.17■□□□□ 0.98
HOXC9-201ENST00000303450 WBP4O75554 376 aaKnown RBP21.17■□□□□ 0.98
HOXC9-201ENST00000303450 NUDT6P53370 316 aa21.17■□□□□ 0.98
HOXC9-201ENST00000303450 HGFACQ04756 655 aa21.17■□□□□ 0.98
HOXC9-201ENST00000303450 TAF13Q15543 124 aa21.17■□□□□ 0.98
HOXC9-201ENST00000303450 KRT80Q6KB66 452 aa21.17■□□□□ 0.98
HOXC9-201ENST00000303450 SPATC1Q76KD6 591 aa21.17■□□□□ 0.98
HOXC9-201ENST00000303450 SLC35F2Q8IXU6 374 aa21.17■□□□□ 0.98
HOXC9-201ENST00000303450 LILRB1Q8NHL6 650 aaPredicted RBP21.17■□□□□ 0.98
HOXC9-201ENST00000303450 CISD1Q9NZ45 108 aaKnown RBP21.17■□□□□ 0.98
HOXC9-201ENST00000303450 EIF3KQ9UBQ5 218 aaKnown RBP21.17■□□□□ 0.98
HOXC9-201ENST00000303450 UNC79Q9P2D8 2635 aa21.16■□□□□ 0.98
HOXC9-201ENST00000303450 APOL3O95236 402 aa21.16■□□□□ 0.98
HOXC9-201ENST00000303450 ALOX5APP20292 161 aa21.16■□□□□ 0.98
HOXC9-201ENST00000303450 NR4A1P22736 598 aa21.16■□□□□ 0.98
HOXC9-201ENST00000303450 THAP5Q7Z6K1 395 aa21.16■□□□□ 0.98
HOXC9-201ENST00000303450 MNTQ99583 582 aa21.16■□□□□ 0.98
HOXC9-201ENST00000303450 COPS4Q9BT78 406 aa21.16■□□□□ 0.98
HOXC9-201ENST00000303450 AMBNQ9NP70 447 aa21.16■□□□□ 0.98
HOXC9-201ENST00000303450 DDX28Q9NUL7 540 aaKnown RBP21.16■□□□□ 0.98
HOXC9-201ENST00000303450 RPL36Q9Y3U8 105 aaKnown RBP21.16■□□□□ 0.98
HOXC9-201ENST00000303450 HRNRQ86YZ3 2850 aaPredicted RBP21.16■□□□□ 0.98
HOXC9-201ENST00000303450 ZNF878C9JN71 531 aa21.15■□□□□ 0.98
HOXC9-201ENST00000303450 DBHP09172 617 aa21.15■□□□□ 0.98
HOXC9-201ENST00000303450 SLC15A1P46059 708 aa21.15■□□□□ 0.98
HOXC9-201ENST00000303450 ZNF91Q05481 1191 aa21.15■□□□□ 0.98
HOXC9-201ENST00000303450 SNTB2Q13425 540 aaKnown RBP21.15■□□□□ 0.98
HOXC9-201ENST00000303450 SMN1Q16637 294 aaKnown RBP21.15■□□□□ 0.98
HOXC9-201ENST00000303450 ARL9Q6T311 187 aa21.15■□□□□ 0.98
HOXC9-201ENST00000303450 RNF133Q8WVZ7 376 aa21.15■□□□□ 0.98
HOXC9-201ENST00000303450 SPTSSAQ969W0 71 aa21.15■□□□□ 0.98
HOXC9-201ENST00000303450 AMELYQ99218 206 aa21.15■□□□□ 0.98
HOXC9-201ENST00000303450 PLEKHF2Q9H8W4 249 aa21.15■□□□□ 0.98
HOXC9-201ENST00000303450 UBTD1Q9HAC8 227 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms