RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 SEC16AO15027 2179 aa13.21□□□□□ -0.3
COL6A2-201ENST00000300527 MYO9BQ13459 2157 aa13.21□□□□□ -0.3
COL6A2-201ENST00000300527 A6NLC8 198 aa13.21□□□□□ -0.3
COL6A2-201ENST00000300527 NKX2-2O95096 273 aa13.21□□□□□ -0.3
COL6A2-201ENST00000300527 SLC25A4P12235 298 aa13.21□□□□□ -0.3
COL6A2-201ENST00000300527 ZBTB25P24278 435 aa13.21□□□□□ -0.3
COL6A2-201ENST00000300527 LINC00346Q8IVM7 164 aa13.21□□□□□ -0.3
COL6A2-201ENST00000300527 ZSCAN4Q8NAM6 433 aaPredicted RBP13.21□□□□□ -0.3
COL6A2-201ENST00000300527 C1orf198Q9H425 327 aa13.21□□□□□ -0.3
COL6A2-201ENST00000300527 hCG_1809904A0A1W2PP81 198 aa13.2□□□□□ -0.3
COL6A2-201ENST00000300527 A0A1W2PR64 198 aa13.2□□□□□ -0.3
COL6A2-201ENST00000300527 A0A1W2PRV1 198 aa13.2□□□□□ -0.3
COL6A2-201ENST00000300527 HCRTR1O43613 425 aa13.2□□□□□ -0.3
COL6A2-201ENST00000300527 ITGA3P26006 1051 aa13.2□□□□□ -0.3
COL6A2-201ENST00000300527 ZNF542PQ5EBM4 170 aa13.2□□□□□ -0.3
COL6A2-201ENST00000300527 C9orf152Q5JTZ5 239 aa13.2□□□□□ -0.3
COL6A2-201ENST00000300527 SPRED2Q7Z698 418 aa13.2□□□□□ -0.3
COL6A2-201ENST00000300527 OR6S1Q8NH40 331 aa13.2□□□□□ -0.3
COL6A2-201ENST00000300527 OR51F2Q8NH61 342 aa13.2□□□□□ -0.3
COL6A2-201ENST00000300527 PRRT1Q99946 306 aa13.2□□□□□ -0.3
COL6A2-201ENST00000300527 SLC17A9Q9BYT1 436 aa13.2□□□□□ -0.3
COL6A2-201ENST00000300527 IGKV1D-42A0A075B6H8 117 aa13.2□□□□□ -0.3
COL6A2-201ENST00000300527 RNASEK-C17orf49H0YIS7 233 aa13.2□□□□□ -0.3
COL6A2-201ENST00000300527 CRHP06850 196 aa13.2□□□□□ -0.3
COL6A2-201ENST00000300527 ZNF735P0CB33 412 aa13.2□□□□□ -0.3
COL6A2-201ENST00000300527 RAB6AP20340 208 aa13.2□□□□□ -0.3
COL6A2-201ENST00000300527 ABCD3P28288 659 aa13.2□□□□□ -0.3
COL6A2-201ENST00000300527 IGFALSP35858 605 aa13.2□□□□□ -0.3
COL6A2-201ENST00000300527 BTG2P78543 158 aa13.2□□□□□ -0.3
COL6A2-201ENST00000300527 MGAT2Q10469 447 aa13.2□□□□□ -0.3
COL6A2-201ENST00000300527 ZNF74Q16587 644 aa13.2□□□□□ -0.3
COL6A2-201ENST00000300527 C2orf27AQ580R0 203 aa13.2□□□□□ -0.3
COL6A2-201ENST00000300527 CLEC9AQ6UXN8 241 aa13.2□□□□□ -0.3
COL6A2-201ENST00000300527 NPSR1Q6W5P4 371 aa13.2□□□□□ -0.3
COL6A2-201ENST00000300527 ADGRE4PQ86SQ3 457 aa13.2□□□□□ -0.3
COL6A2-201ENST00000300527 COMMD2Q86X83 199 aa13.2□□□□□ -0.3
COL6A2-201ENST00000300527 FRMD1Q8N878 549 aa13.2□□□□□ -0.3
COL6A2-201ENST00000300527 RAB7BQ96AH8 199 aa13.2□□□□□ -0.3
COL6A2-201ENST00000300527 OR2M4Q96R27 311 aa13.2□□□□□ -0.3
COL6A2-201ENST00000300527 APOOQ9BUR5 198 aa13.2□□□□□ -0.3
COL6A2-201ENST00000300527 OR5AC2Q9NZP5 309 aa13.2□□□□□ -0.3
COL6A2-201ENST00000300527 CEBPGP53567 150 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 CD226Q15762 336 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 SGCAQ16586 387 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 LPCAT3Q6P1A2 487 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 COX15Q7KZN9 410 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 ZNF101Q8IZC7 436 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 SECTM1Q8WVN6 248 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 MCHR2Q969V1 340 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 KLF15Q9UIH9 416 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 PCDHGA1Q9Y5H4 931 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 KIAA1549LQ6ZVL6 1849 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 SDK1Q7Z5N4 2213 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 A0A087WV62 115 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 CDC14CA4D256 554 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 PTAFRP25105 342 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 CTNNB1P35222 781 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 OR4D6Q8NGJ1 314 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 HDAC8Q9BY41 377 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 ACKR4Q9NPB9 350 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 MMP26Q9NRE1 261 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 PILRAQ9UKJ1 303 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 TMEM14AQ9Y6G1 99 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 P2RY10O00398 339 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 CYR61O00622 381 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 H2AFB1P0C5Y9 115 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 MAOAP21397 527 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 ZP2Q05996 745 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 SLC17A1Q14916 467 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 NCMAPQ5T1S8 102 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 RPL7L1Q6DKI1 246 aaKnown RBP13.19□□□□□ -0.3
COL6A2-201ENST00000300527 ASPHD2Q6ICH7 369 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 LCN10Q6JVE6 187 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 ZNF813Q6ZN06 617 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 CA13Q8N1Q1 262 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 OR1E3Q8WZA6 343 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 ANKRD9Q96BM1 317 aaPredicted RBP13.19□□□□□ -0.3
COL6A2-201ENST00000300527 GAL3ST4Q96RP7 486 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 OBSL1O75147 1896 aa13.19□□□□□ -0.3
COL6A2-201ENST00000300527 METTL21EPA6NDL7 271 aa13.18□□□□□ -0.3
COL6A2-201ENST00000300527 H0YIZ8 118 aa13.18□□□□□ -0.3
COL6A2-201ENST00000300527 TACR3P29371 465 aa13.18□□□□□ -0.3
COL6A2-201ENST00000300527 CLINT1Q14677 625 aa13.18□□□□□ -0.3
COL6A2-201ENST00000300527 OR2I1PQ8NGU4 316 aa13.18□□□□□ -0.3
COL6A2-201ENST00000300527 MAFIPQ8WZ33 124 aa13.18□□□□□ -0.3
COL6A2-201ENST00000300527 NUDT9Q9BW91 350 aa13.18□□□□□ -0.3
COL6A2-201ENST00000300527 SMCO4Q9NRQ5 59 aa13.18□□□□□ -0.3
COL6A2-201ENST00000300527 A0A1W2PPH5 198 aa13.18□□□□□ -0.3
COL6A2-201ENST00000300527 LY86O95711 162 aa13.18□□□□□ -0.3
COL6A2-201ENST00000300527 SCGB1D2O95969 90 aa13.18□□□□□ -0.3
COL6A2-201ENST00000300527 ARG1P05089 322 aa13.18□□□□□ -0.3
COL6A2-201ENST00000300527 S1PR1P21453 382 aa13.18□□□□□ -0.3
COL6A2-201ENST00000300527 LPAR6P43657 344 aa13.18□□□□□ -0.3
COL6A2-201ENST00000300527 RIDAP52758 137 aaKnown RBP13.18□□□□□ -0.3
COL6A2-201ENST00000300527 ZNF616Q08AN1 781 aa13.18□□□□□ -0.3
COL6A2-201ENST00000300527 MICBQ29980 383 aa13.18□□□□□ -0.3
COL6A2-201ENST00000300527 CHRDL2Q6WN34 429 aa13.18□□□□□ -0.3
COL6A2-201ENST00000300527 DNM1P46Q6ZS02 220 aa13.18□□□□□ -0.3
COL6A2-201ENST00000300527 SLC25A42Q86VD7 318 aa13.18□□□□□ -0.3
COL6A2-201ENST00000300527 CD300LFQ8TDQ1 290 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms