RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 LINC00346Q8IVM7 164 aa23.19■■□□□ 1.3
SSU72-201ENST00000291386 C1orf174Q8IYL3 243 aa23.19■■□□□ 1.3
SSU72-201ENST00000291386 OR1F12Q8NHA8 337 aa23.19■■□□□ 1.3
SSU72-201ENST00000291386 COQ7Q99807 217 aa23.19■■□□□ 1.3
SSU72-201ENST00000291386 WDR76Q9H967 626 aa23.19■■□□□ 1.3
SSU72-201ENST00000291386 GDF2Q9UK05 429 aaPredicted RBP23.19■■□□□ 1.3
SSU72-201ENST00000291386 CCDC168Q8NDH2 2452 aa23.19■■□□□ 1.3
SSU72-201ENST00000291386 B9A039 149 aa23.18■■□□□ 1.3
SSU72-201ENST00000291386 OR4A8P0C604 315 aa23.18■■□□□ 1.3
SSU72-201ENST00000291386 HTR5AP47898 357 aa23.18■■□□□ 1.3
SSU72-201ENST00000291386 ELF3P78545 371 aaPredicted RBP23.18■■□□□ 1.3
SSU72-201ENST00000291386 RCN1Q15293 331 aa23.18■■□□□ 1.3
SSU72-201ENST00000291386 VHLLQ6RSH7 139 aa23.18■■□□□ 1.3
SSU72-201ENST00000291386 DCLRE1CQ96SD1 692 aaKnown RBP23.18■■□□□ 1.3
SSU72-201ENST00000291386 GSX2Q9BZM3 304 aa23.18■■□□□ 1.3
SSU72-201ENST00000291386 EIF3KQ9UBQ5 218 aaKnown RBP23.18■■□□□ 1.3
SSU72-201ENST00000291386 CMAHPQ9Y471 501 aa23.18■■□□□ 1.3
SSU72-201ENST00000291386 GPRIN2O60269 458 aa23.17■■□□□ 1.3
SSU72-201ENST00000291386 SMPD2O60906 423 aa23.17■■□□□ 1.3
SSU72-201ENST00000291386 CCNOP22674 350 aa23.17■■□□□ 1.3
SSU72-201ENST00000291386 GSTT1P30711 240 aa23.17■■□□□ 1.3
SSU72-201ENST00000291386 WNT5AP41221 380 aa23.17■■□□□ 1.3
SSU72-201ENST00000291386 UNQ6126/PRO20091Q6UXV3 157 aa23.17■■□□□ 1.3
SSU72-201ENST00000291386 CFAP77Q6ZQR2 320 aa23.17■■□□□ 1.3
SSU72-201ENST00000291386 TCEANCQ8N8B7 351 aa23.17■■□□□ 1.3
SSU72-201ENST00000291386 BBS1Q8NFJ9 593 aa23.17■■□□□ 1.3
SSU72-201ENST00000291386 TMEM163Q8TC26 289 aa23.17■■□□□ 1.3
SSU72-201ENST00000291386 IPCEF1Q8WWN9 437 aaPredicted RBP23.17■■□□□ 1.3
SSU72-201ENST00000291386 MRPL24Q96A35 216 aaKnown RBP23.17■■□□□ 1.3
SSU72-201ENST00000291386 HRASLS5Q96KN8 279 aa23.17■■□□□ 1.3
SSU72-201ENST00000291386 INTS14Q96SY0 518 aa23.17■■□□□ 1.3
SSU72-201ENST00000291386 PNRC2Q9NPJ4 139 aaKnown RBP23.17■■□□□ 1.3
SSU72-201ENST00000291386 ZNF593O00488 134 aaPredicted RBP23.16■■□□□ 1.3
SSU72-201ENST00000291386 TLX2O43763 284 aaPredicted RBP23.16■■□□□ 1.3
SSU72-201ENST00000291386 FAM157BP0CG42 384 aa23.16■■□□□ 1.3
SSU72-201ENST00000291386 EVX1P49640 407 aa23.16■■□□□ 1.3
SSU72-201ENST00000291386 ECH1Q13011 328 aa23.16■■□□□ 1.3
SSU72-201ENST00000291386 TESK1Q15569 626 aa23.16■■□□□ 1.3
SSU72-201ENST00000291386 KRTAP27-1Q3LI81 207 aa23.16■■□□□ 1.3
SSU72-201ENST00000291386 ARL9Q6T311 187 aa23.16■■□□□ 1.3
SSU72-201ENST00000291386 TIGD4Q8IY51 512 aa23.16■■□□□ 1.3
SSU72-201ENST00000291386 MAP6Q96JE9 813 aa23.16■■□□□ 1.3
SSU72-201ENST00000291386 C4orf45Q96LM5 186 aa23.16■■□□□ 1.3
SSU72-201ENST00000291386 PLK3Q9H4B4 646 aa23.16■■□□□ 1.3
SSU72-201ENST00000291386 ELOVL3Q9HB03 270 aa23.16■■□□□ 1.3
SSU72-201ENST00000291386 C8orf4Q9NR00 106 aa23.16■■□□□ 1.3
SSU72-201ENST00000291386 FBXO9Q9UK97 447 aaPredicted RBP23.16■■□□□ 1.3
SSU72-201ENST00000291386 MYO9AB2RTY4 2548 aa23.16■■□□□ 1.3
SSU72-201ENST00000291386 PSKH1P11801 424 aa23.15■■□□□ 1.3
SSU72-201ENST00000291386 BMP4P12644 408 aa23.15■■□□□ 1.3
SSU72-201ENST00000291386 ART1P52961 327 aa23.15■■□□□ 1.3
SSU72-201ENST00000291386 MSMPQ1L6U9 139 aa23.15■■□□□ 1.3
SSU72-201ENST00000291386 KLHL12Q53G59 568 aa23.15■■□□□ 1.3
SSU72-201ENST00000291386 AADACL4Q5VUY2 407 aa23.15■■□□□ 1.3
SSU72-201ENST00000291386 NXNL2Q5VZ03 156 aa23.15■■□□□ 1.3
SSU72-201ENST00000291386 ZNF101Q8IZC7 436 aa23.15■■□□□ 1.3
SSU72-201ENST00000291386 DCLRE1BQ9H816 532 aa23.15■■□□□ 1.3
SSU72-201ENST00000291386 TBCCD1Q9NVR7 557 aa23.15■■□□□ 1.3
SSU72-201ENST00000291386 ARFGEF3Q5TH69 2177 aa23.14■■□□□ 1.3
SSU72-201ENST00000291386 TMEM129A0AVI4 362 aa23.14■■□□□ 1.29
SSU72-201ENST00000291386 SPARCP09486 303 aa23.14■■□□□ 1.29
SSU72-201ENST00000291386 RPS27P42677 84 aaKnown RBP23.14■■□□□ 1.29
SSU72-201ENST00000291386 PTH2RP49190 550 aa23.14■■□□□ 1.29
SSU72-201ENST00000291386 APOFQ13790 326 aa23.14■■□□□ 1.29
SSU72-201ENST00000291386 RGS7BPQ6MZT1 257 aaPredicted RBP23.14■■□□□ 1.29
SSU72-201ENST00000291386 SHFQ7M4L6 423 aa23.14■■□□□ 1.29
SSU72-201ENST00000291386 OR10S1Q8NGN2 331 aa23.14■■□□□ 1.29
SSU72-201ENST00000291386 OR8J1Q8NGP2 316 aa23.14■■□□□ 1.29
SSU72-201ENST00000291386 TRUB1Q8WWH5 349 aaKnown RBP23.14■■□□□ 1.29
SSU72-201ENST00000291386 ZMYND19Q96E35 227 aaPredicted RBP23.14■■□□□ 1.29
SSU72-201ENST00000291386 RDH12Q96NR8 316 aa23.14■■□□□ 1.29
SSU72-201ENST00000291386 MBOAT4Q96T53 435 aa23.14■■□□□ 1.29
SSU72-201ENST00000291386 TEAD3Q99594 435 aa23.14■■□□□ 1.29
SSU72-201ENST00000291386 PITX2Q99697 317 aa23.14■■□□□ 1.29
SSU72-201ENST00000291386 ATF6BQ99941 703 aa23.14■■□□□ 1.29
SSU72-201ENST00000291386 TOR3AQ9H497 397 aa23.14■■□□□ 1.29
SSU72-201ENST00000291386 DDX28Q9NUL7 540 aaKnown RBP23.14■■□□□ 1.29
SSU72-201ENST00000291386 ITGB1BP2Q9UKP3 347 aa23.14■■□□□ 1.29
SSU72-201ENST00000291386 PRRC2AP48634 2157 aaKnown RBP23.14■■□□□ 1.29
SSU72-201ENST00000291386 CCDC182A6NF36 153 aa23.13■■□□□ 1.29
SSU72-201ENST00000291386 H7C417 338 aa23.13■■□□□ 1.29
SSU72-201ENST00000291386 J3QW42 95 aa23.13■■□□□ 1.29
SSU72-201ENST00000291386 CASQ2O14958 399 aaPredicted RBP23.13■■□□□ 1.29
SSU72-201ENST00000291386 ZNF250P15622 560 aa23.13■■□□□ 1.29
SSU72-201ENST00000291386 TUBG1P23258 451 aa23.13■■□□□ 1.29
SSU72-201ENST00000291386 CDC42P60953 191 aa23.13■■□□□ 1.29
SSU72-201ENST00000291386 TRIP10Q15642 601 aa23.13■■□□□ 1.29
SSU72-201ENST00000291386 RSPO1Q2MKA7 263 aaPredicted RBP23.13■■□□□ 1.29
SSU72-201ENST00000291386 ZIK1Q3SY52 487 aaPredicted RBP23.13■■□□□ 1.29
SSU72-201ENST00000291386 LCN1P1Q5VSP4 162 aa23.13■■□□□ 1.29
SSU72-201ENST00000291386 DCXRQ7Z4W1 244 aa23.13■■□□□ 1.29
SSU72-201ENST00000291386 ERI1Q8IV48 349 aaKnown RBP23.13■■□□□ 1.29
SSU72-201ENST00000291386 OR1J1Q8NGS3 322 aa23.13■■□□□ 1.29
SSU72-201ENST00000291386 ST7LQ8TDW4 575 aa23.13■■□□□ 1.29
SSU72-201ENST00000291386 SLC7A6Q92536 515 aa23.13■■□□□ 1.29
SSU72-201ENST00000291386 TRMT61AQ96FX7 289 aaKnown RBP23.13■■□□□ 1.29
SSU72-201ENST00000291386 DOK1Q99704 481 aa23.13■■□□□ 1.29
SSU72-201ENST00000291386 MRPL37Q9BZE1 423 aaKnown RBP23.13■■□□□ 1.29
SSU72-201ENST00000291386 TUBG2Q9NRH3 451 aa23.13■■□□□ 1.29
SSU72-201ENST00000291386 PMF1-BGLAPU3KQ54 211 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms