RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 GPR84Q9NQS5 396 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 IL20Q9NYY1 176 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 HIF3AQ9Y2N7 669 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 HSD17B6O14756 317 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 MRPL33O75394 65 aaKnown RBP4.33□□□□□ -1.72
UBR1-201ENST00000290650 ZFPL1O95159 310 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 DDAH2O95865 285 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 EPXP11678 715 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 CD53P19397 219 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 LAP3P28838 519 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 TSFMP43897 325 aaKnown RBP4.33□□□□□ -1.72
UBR1-201ENST00000290650 TMEM244Q5VVB8 128 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 PLXDC2Q6UX71 529 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 C12orf45Q8N5I9 185 aaPredicted RBP4.33□□□□□ -1.72
UBR1-201ENST00000290650 OR10AC1Q8NH08 325 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 SLAMF6Q96DU3 332 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 B9D1Q9UPM9 204 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 NOSIPQ9Y314 301 aaKnown RBP4.33□□□□□ -1.72
UBR1-201ENST00000290650 DNAH14Q0VDD8 3507 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 PRSS37A4D1T9 235 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 F8W036 122 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 SPRY1O43609 319 aaPredicted RBP4.32□□□□□ -1.72
UBR1-201ENST00000290650 SULT1B1O43704 296 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 TAS2R20P59543 309 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 BLOC1S1P78537 153 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 FUT5Q11128 374 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 INPP5JQ15735 1006 aaPredicted RBP4.32□□□□□ -1.72
UBR1-201ENST00000290650 YIF1BQ5BJH7 314 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 OR5L1Q8NGL2 311 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 AKR7LQ8NHP1 331 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 NT5CQ8TCD5 201 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 ARL5BQ96KC2 179 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 TAS2R8Q9NYW2 309 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 A0A0B4J2E0 115 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 A0A0U1RQK1 487 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 A0A1B0GX12 115 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 ADAM10O14672 748 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 ANGPTL7O43827 346 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 ZNF254O75437 659 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 GRPP07492 148 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 TMIGD3P0DMS9 266 aaPredicted RBP4.32□□□□□ -1.72
UBR1-201ENST00000290650 B4GALT1P15291 398 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 PRKACBP22694 351 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 DIO1P49895 249 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 LUMP51884 338 aaPredicted RBP4.32□□□□□ -1.72
UBR1-201ENST00000290650 PSG6Q00889 435 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 OPCMLQ14982 345 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 MRM1Q6IN84 353 aaKnown RBP4.32□□□□□ -1.72
UBR1-201ENST00000290650 TMEM81Q6P7N7 255 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 GRINAQ7Z429 371 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 FAM109AQ8N4B1 249 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 ARIH2OSQ8N7S6 290 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 OR6F1Q8NGZ6 308 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 MAFAQ8NHW3 353 aaPredicted RBP4.32□□□□□ -1.72
UBR1-201ENST00000290650 SCGB3A2Q96PL1 93 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 ABHD1Q96SE0 405 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 ARPC5LQ9BPX5 153 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 MFRPQ9BY79 579 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 CBY1Q9Y3M2 126 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 SIRT4Q9Y6E7 314 aaPredicted RBP4.32□□□□□ -1.72
UBR1-201ENST00000290650 LOC100289279A0A1B0GTE1 492 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 CELA2AP08217 269 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 CBR1P16152 277 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 GLB1P16278 677 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 NME2P22392 152 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 DUSP1P28562 367 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 TAS2R19P59542 299 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 RBMS2Q15434 407 aaKnown RBP4.32□□□□□ -1.72
UBR1-201ENST00000290650 PWWP2BQ6NUJ5 590 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 NHLRC1Q6VVB1 395 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 NPSR1Q6W5P4 371 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 ZSCAN1Q8NBB4 408 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 OR2G2Q8NGZ5 317 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 PTP4A1Q93096 173 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 NECAB3Q96P71 396 aaPredicted RBP4.32□□□□□ -1.72
UBR1-201ENST00000290650 C20orf24Q9BUV8 137 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 HRASLSQ9HDD0 168 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 PRDM6Q9NQX0 595 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 FZR1Q9UM11 496 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 SPTBN1Q01082 2364 aaKnown RBP4.32□□□□□ -1.72
UBR1-201ENST00000290650 IFITM5A6NNB3 132 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 RER1O15258 196 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 CER1O95813 267 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 HLA-DOBP13765 273 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 GABRB1P18505 474 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 HRH1P35367 487 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 APLNRP35414 380 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 GABRA2P47869 451 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 IKZF1Q13422 519 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 USF2Q15853 346 aaPredicted RBP4.32□□□□□ -1.72
UBR1-201ENST00000290650 ZNF74Q16587 644 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 OR2B11Q5JQS5 317 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 SULF2Q8IWU5 870 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 NINJ1Q92982 152 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 ST6GAL2Q96JF0 529 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 CMSS1Q9BQ75 279 aaKnown RBP4.32□□□□□ -1.72
UBR1-201ENST00000290650 SLC25A19Q9HC21 320 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 CHST11Q9NPF2 352 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 LANCL2Q9NS86 450 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 A0A087WV62 115 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms