RNA–Protein interactions for RNA: ENST00000283415.3

LPCAT1-201, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-201ENST00000283415 TINAGL1Q9GZM7 467 aaPredicted RBP12.41□□□□□ -0.42
LPCAT1-201ENST00000283415 MMP15P51511 669 aa12.4□□□□□ -0.42
LPCAT1-201ENST00000283415 RPS4XP62701 263 aaKnown RBP12.4□□□□□ -0.42
LPCAT1-201ENST00000283415 C19orf57Q0VDD7 668 aa12.4□□□□□ -0.42
LPCAT1-201ENST00000283415 CLPPQ16740 277 aaPredicted RBP12.4□□□□□ -0.42
LPCAT1-201ENST00000283415 ZNF704Q6ZNC4 412 aaPredicted RBP12.4□□□□□ -0.42
LPCAT1-201ENST00000283415 GTPBP8Q8N3Z3 284 aaPredicted RBP12.4□□□□□ -0.42
LPCAT1-201ENST00000283415 OR1L3Q8NH93 324 aa12.4□□□□□ -0.42
LPCAT1-201ENST00000283415 ARL5BQ96KC2 179 aa12.4□□□□□ -0.42
LPCAT1-201ENST00000283415 GFI1Q99684 422 aa12.4□□□□□ -0.42
LPCAT1-201ENST00000283415 CHST6Q9GZX3 395 aa12.4□□□□□ -0.42
LPCAT1-201ENST00000283415 FBXO9Q9UK97 447 aaPredicted RBP12.4□□□□□ -0.42
LPCAT1-201ENST00000283415 PTRH2Q9Y3E5 179 aaKnown RBP12.4□□□□□ -0.42
LPCAT1-201ENST00000283415 CXCL12P48061 93 aa12.4□□□□□ -0.42
LPCAT1-201ENST00000283415 DNM1P34Q6PK57 102 aa12.4□□□□□ -0.42
LPCAT1-201ENST00000283415 OR2G2Q8NGZ5 317 aa12.4□□□□□ -0.42
LPCAT1-201ENST00000283415 SLC46A1Q96NT5 459 aa12.4□□□□□ -0.42
LPCAT1-201ENST00000283415 S1PR5Q9H228 398 aa12.4□□□□□ -0.42
LPCAT1-201ENST00000283415 SMOC1Q9H4F8 434 aa12.4□□□□□ -0.42
LPCAT1-201ENST00000283415 MMP25Q9NPA2 562 aa12.4□□□□□ -0.42
LPCAT1-201ENST00000283415 PCNX1Q96RV3 2341 aa12.4□□□□□ -0.42
LPCAT1-201ENST00000283415 CCDC163A0A0D9SF12 145 aa12.4□□□□□ -0.42
LPCAT1-201ENST00000283415 TEX13DA0A0J9YY54 714 aaPredicted RBP12.4□□□□□ -0.42
LPCAT1-201ENST00000283415 CTDSPLO15194 276 aa12.4□□□□□ -0.42
LPCAT1-201ENST00000283415 GSTZ1O43708 216 aaPredicted RBP12.4□□□□□ -0.42
LPCAT1-201ENST00000283415 HLA-DOBP13765 273 aa12.4□□□□□ -0.42
LPCAT1-201ENST00000283415 CD27P26842 260 aa12.4□□□□□ -0.42
LPCAT1-201ENST00000283415 SDHAP31040 664 aa12.4□□□□□ -0.42
LPCAT1-201ENST00000283415 ZNF141Q15928 474 aa12.4□□□□□ -0.42
LPCAT1-201ENST00000283415 ZNF74Q16587 644 aa12.4□□□□□ -0.42
LPCAT1-201ENST00000283415 C2orf76Q3KRA6 126 aa12.4□□□□□ -0.42
LPCAT1-201ENST00000283415 TMEM255AQ5JRV8 349 aa12.4□□□□□ -0.42
LPCAT1-201ENST00000283415 CMTM3Q96MX0 182 aa12.4□□□□□ -0.42
LPCAT1-201ENST00000283415 EYSQ5T1H1 3165 aa12.4□□□□□ -0.42
LPCAT1-201ENST00000283415 NAP1L6A6NFF2 107 aa12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 SHISA7A6NL88 538 aa12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 M0R036 132 aa12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 RAB40ALP0C0E4 278 aa12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 CSRP1P21291 193 aaKnown RBP12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 BCKDHBP21953 392 aa12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 RFC3P40938 356 aa12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 ISXQ2M1V0 245 aa12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 RAB40AQ8WXH6 277 aa12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 PGAM5Q96HS1 289 aa12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 C7orf50Q9BRJ6 194 aaKnown RBP12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 RHBDD3Q9Y3P4 386 aa12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 TRAV8-7A0A075B6U6 113 aa12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 SULT2B1O00204 365 aa12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 CRTAPO75718 401 aaPredicted RBP12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 MPC2O95563 127 aa12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 PVALBP20472 110 aaPredicted RBP12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 AVPR2P30518 371 aa12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 CDONQ4KMG0 1287 aa12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 OR52W1Q6IF63 320 aa12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 FAM57BQ71RH2 274 aa12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 SPAG16Q8N0X2 631 aa12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 EXD3Q8N9H8 876 aa12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 OR10R2Q8NGX6 335 aa12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 LIPHQ8WWY8 451 aa12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 TTC9Q92623 222 aa12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 CCDC74AQ96AQ1 378 aa12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 AMELYQ99218 206 aa12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 VRK1Q99986 396 aaPredicted RBP12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 MEIKINA0A087WXM9 373 aa12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 TEX51A0A1B0GUA7 166 aa12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 TNFSF12O43508 249 aa12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 EFNB2P52799 333 aa12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 BAMBIQ13145 260 aa12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 MUC20Q8N307 709 aaPredicted RBP12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 NPEPL1Q8NDH3 523 aa12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 FAM71CQ8NEG0 241 aa12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 C2CD4CQ8TF44 421 aa12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 GPX7Q96SL4 187 aaPredicted RBP12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 HHLA2Q9UM44 414 aa12.39□□□□□ -0.43
LPCAT1-201ENST00000283415 IGHV3-64DA0A0J9YX35 117 aa12.38□□□□□ -0.43
LPCAT1-201ENST00000283415 METTL12A8MUP2 240 aa12.38□□□□□ -0.43
LPCAT1-201ENST00000283415 TLX3O43711 291 aaPredicted RBP12.38□□□□□ -0.43
LPCAT1-201ENST00000283415 PMP2P02689 132 aa12.38□□□□□ -0.43
LPCAT1-201ENST00000283415 CSF1P09603 554 aa12.38□□□□□ -0.43
LPCAT1-201ENST00000283415 CTLA4P16410 223 aa12.38□□□□□ -0.43
LPCAT1-201ENST00000283415 ABCD3P28288 659 aa12.38□□□□□ -0.43
LPCAT1-201ENST00000283415 ACTBP60709 375 aa12.38□□□□□ -0.43
LPCAT1-201ENST00000283415 RPS15P62841 145 aaKnown RBP12.38□□□□□ -0.43
LPCAT1-201ENST00000283415 ACTG1P63261 375 aa12.38□□□□□ -0.43
LPCAT1-201ENST00000283415 FNDC7Q5VTL7 733 aa12.38□□□□□ -0.43
LPCAT1-201ENST00000283415 PTCRAQ6ISU1 281 aaPredicted RBP12.38□□□□□ -0.43
LPCAT1-201ENST00000283415 SLC16A9Q7RTY1 509 aa12.38□□□□□ -0.43
LPCAT1-201ENST00000283415 OR2AK2Q8NG84 335 aa12.38□□□□□ -0.43
LPCAT1-201ENST00000283415 VN1R1Q9GZP7 353 aa12.38□□□□□ -0.43
LPCAT1-201ENST00000283415 PTGES2Q9H7Z7 377 aa12.38□□□□□ -0.43
LPCAT1-201ENST00000283415 ZFP64Q9NPA5 681 aa12.38□□□□□ -0.43
LPCAT1-201ENST00000283415 PRR13Q9NZ81 148 aa12.38□□□□□ -0.43
LPCAT1-201ENST00000283415 S100A9P06702 114 aaKnown RBP12.38□□□□□ -0.43
LPCAT1-201ENST00000283415 IL11P20809 199 aa12.38□□□□□ -0.43
LPCAT1-201ENST00000283415 CFPP27918 469 aa12.38□□□□□ -0.43
LPCAT1-201ENST00000283415 PPICP45877 212 aa12.38□□□□□ -0.43
LPCAT1-201ENST00000283415 CAPZA1P52907 286 aa12.38□□□□□ -0.43
LPCAT1-201ENST00000283415 NKAIN1Q4KMZ8 207 aa12.38□□□□□ -0.43
LPCAT1-201ENST00000283415 SLC25A24Q6NUK1 477 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms