RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 RLN1P04808 185 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 ITGB2P05107 769 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 ISG15P05161 165 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 GABRA1P14867 456 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 ZNF250P15622 560 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 IGFBP3P17936 291 aaPredicted RBP11.58□□□□□ -0.56
C9orf3-201ENST00000277198 EFNB2P52799 333 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 GLO1Q04760 184 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 PLA2G7Q13093 441 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 HLXQ14774 488 aaPredicted RBP11.58□□□□□ -0.56
C9orf3-201ENST00000277198 DEGS2Q6QHC5 323 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 CATSPERDQ86XM0 798 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 OR51S1Q8NGJ8 323 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 OR1J4Q8NGS1 313 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 ASB5Q8WWX0 329 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 SLC25A28Q96A46 364 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 CLIP3Q96DZ5 547 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 WBP1Q96G27 269 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 TGM7Q96PF1 710 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 ULBP3Q9BZM4 244 aa11.58□□□□□ -0.56
C9orf3-201ENST00000277198 MRPL22Q9NWU5 206 aaKnown RBP11.58□□□□□ -0.56
C9orf3-201ENST00000277198 RALYQ9UKM9 306 aaKnown RBP11.58□□□□□ -0.56
C9orf3-201ENST00000277198 SLC22A23A1A5C7 686 aa11.57□□□□□ -0.56
C9orf3-201ENST00000277198 SLC16A7O60669 478 aa11.57□□□□□ -0.56
C9orf3-201ENST00000277198 RPA2P15927 270 aa11.57□□□□□ -0.56
C9orf3-201ENST00000277198 ZP3P21754 424 aa11.57□□□□□ -0.56
C9orf3-201ENST00000277198 HTR2CP28335 458 aa11.57□□□□□ -0.56
C9orf3-201ENST00000277198 H2BFSP57053 126 aa11.57□□□□□ -0.56
C9orf3-201ENST00000277198 TAGLNQ01995 201 aaKnown RBP11.57□□□□□ -0.56
C9orf3-201ENST00000277198 PLCXD2Q0VAA5 305 aa11.57□□□□□ -0.56
C9orf3-201ENST00000277198 CLVS2Q5SYC1 327 aa11.57□□□□□ -0.56
C9orf3-201ENST00000277198 RGS7BPQ6MZT1 257 aaPredicted RBP11.57□□□□□ -0.56
C9orf3-201ENST00000277198 TMUB2Q71RG4 321 aa11.57□□□□□ -0.56
C9orf3-201ENST00000277198 MISPQ8IVT2 679 aa11.57□□□□□ -0.56
C9orf3-201ENST00000277198 MUC20Q8N307 709 aaPredicted RBP11.57□□□□□ -0.56
C9orf3-201ENST00000277198 SPERTQ8NA61 448 aa11.57□□□□□ -0.56
C9orf3-201ENST00000277198 OR8K3Q8NH51 312 aa11.57□□□□□ -0.56
C9orf3-201ENST00000277198 TNFAIP8L1Q8WVP5 186 aa11.57□□□□□ -0.56
C9orf3-201ENST00000277198 NAT6Q93015 286 aa11.57□□□□□ -0.56
C9orf3-201ENST00000277198 FOXRED1Q96CU9 486 aaPredicted RBP11.57□□□□□ -0.56
C9orf3-201ENST00000277198 OMA1Q96E52 524 aa11.57□□□□□ -0.56
C9orf3-201ENST00000277198 GAL3ST4Q96RP7 486 aa11.57□□□□□ -0.56
C9orf3-201ENST00000277198 NUDT9Q9BW91 350 aa11.57□□□□□ -0.56
C9orf3-201ENST00000277198 RTN4RQ9BZR6 473 aa11.57□□□□□ -0.56
C9orf3-201ENST00000277198 COPS7AQ9UBW8 275 aa11.57□□□□□ -0.56
C9orf3-201ENST00000277198 UNC13CQ8NB66 2214 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 URB1O60287 2271 aaKnown RBP11.56□□□□□ -0.56
C9orf3-201ENST00000277198 TMED7-TICAM2A0A0A6YYA0 188 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 TMEM272A0A1B0GTI8 110 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 MFSD2BA6NFX1 497 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 A6NIZ1 184 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 NPIPB13A6NJU9 1138 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 KRBOX1C9JBD0 128 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 NPIPB4C9JG80 1138 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 C11orf98E9PRG8 122 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 NTN3O00634 580 aaPredicted RBP11.56□□□□□ -0.56
C9orf3-201ENST00000277198 PLPP3O14495 311 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 PRKNO60260 465 aaPredicted RBP11.56□□□□□ -0.56
C9orf3-201ENST00000277198 CD3DP04234 171 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 SPARCP09486 303 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 ACSM4P0C7M7 580 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 RPS27P42677 84 aaKnown RBP11.56□□□□□ -0.56
C9orf3-201ENST00000277198 GFERP55789 205 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 OR1D5P58170 312 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 RAP1BP61224 184 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 RAP1AP62834 184 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 ADAM8P78325 824 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 TOMM34Q15785 309 aaPredicted RBP11.56□□□□□ -0.56
C9orf3-201ENST00000277198 ARHGAP40Q5TG30 622 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 C1orf140Q5VVS0 124 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 LPCAT3Q6P1A2 487 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 TMEM65Q6PI78 240 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 DNM1P34Q6PK57 102 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 TMEM205Q6UW68 189 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 LRRC69Q6ZNQ3 347 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 TTLL10Q6ZVT0 673 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 SLC29A4Q7RTT9 530 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 MARCH3Q86UD3 253 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 GABRG1Q8N1C3 465 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 NKAIN3Q8N8D7 197 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 OR52B4Q8NGK2 314 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 OR1N1Q8NGS0 311 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 OR52N5Q8NH56 324 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 TSLPQ969D9 159 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 WWTR1Q9GZV5 400 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 ATG5Q9H1Y0 275 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 EXO5Q9H790 373 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 HHLA2Q9UM44 414 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 TMED7Q9Y3B3 224 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 LOC390937A0A1W2PQ73 354 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 ARPC5O15511 151 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 TLX3O43711 291 aaPredicted RBP11.56□□□□□ -0.56
C9orf3-201ENST00000277198 DOK2O60496 412 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 AHSA1O95433 338 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 NUDT14O95848 222 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 PNPP00491 289 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 NMBP08949 121 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 GLB1P16278 677 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 ACHEP22303 614 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 AGTR1P30556 359 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms