RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 ABHD16AO95870 558 aa12.28□□□□□ -0.44
HMGN3-201ENST00000275036 GASTP01350 101 aa12.28□□□□□ -0.44
HMGN3-201ENST00000275036 DBHP09172 617 aa12.28□□□□□ -0.44
HMGN3-201ENST00000275036 CRABP1P29762 137 aa12.28□□□□□ -0.44
HMGN3-201ENST00000275036 GCH1P30793 250 aa12.28□□□□□ -0.44
HMGN3-201ENST00000275036 CHN2P52757 468 aa12.28□□□□□ -0.44
HMGN3-201ENST00000275036 HIST1H3AP68431 136 aa12.28□□□□□ -0.44
HMGN3-201ENST00000275036 MRPS11P82912 194 aaKnown RBP12.28□□□□□ -0.44
HMGN3-201ENST00000275036 SRSF2Q01130 221 aaKnown RBP12.28□□□□□ -0.44
HMGN3-201ENST00000275036 CLEC12AQ5QGZ9 265 aa12.28□□□□□ -0.44
HMGN3-201ENST00000275036 SLC35F1Q5T1Q4 408 aa12.28□□□□□ -0.44
HMGN3-201ENST00000275036 HIST2H3PS2Q5TEC6 136 aa12.28□□□□□ -0.44
HMGN3-201ENST00000275036 TMEM154Q6P9G4 183 aa12.28□□□□□ -0.44
HMGN3-201ENST00000275036 HIST2H3AQ71DI3 136 aa12.28□□□□□ -0.44
HMGN3-201ENST00000275036 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.28□□□□□ -0.44
HMGN3-201ENST00000275036 JAZF1Q86VZ6 243 aa12.28□□□□□ -0.44
HMGN3-201ENST00000275036 PHC2Q8IXK0 858 aa12.28□□□□□ -0.44
HMGN3-201ENST00000275036 SDR9C7Q8NEX9 313 aa12.28□□□□□ -0.44
HMGN3-201ENST00000275036 OR8D4Q8NGM9 314 aa12.28□□□□□ -0.44
HMGN3-201ENST00000275036 CCDC124Q96CT7 223 aaKnown RBP12.28□□□□□ -0.44
HMGN3-201ENST00000275036 ASB9Q96DX5 294 aa12.28□□□□□ -0.44
HMGN3-201ENST00000275036 C1orf159Q96HA4 380 aa12.28□□□□□ -0.44
HMGN3-201ENST00000275036 RACGAP1Q9H0H5 632 aa12.28□□□□□ -0.44
HMGN3-201ENST00000275036 C1orf21Q9H246 121 aa12.28□□□□□ -0.44
HMGN3-201ENST00000275036 ELOVL3Q9HB03 270 aa12.28□□□□□ -0.44
HMGN3-201ENST00000275036 RPRD1BQ9NQG5 326 aaKnown RBP12.28□□□□□ -0.44
HMGN3-201ENST00000275036 NKIRAS2Q9NYR9 191 aa12.28□□□□□ -0.44
HMGN3-201ENST00000275036 PLEK2Q9NYT0 353 aa12.28□□□□□ -0.44
HMGN3-201ENST00000275036 GPR160Q9UJ42 338 aa12.28□□□□□ -0.44
HMGN3-201ENST00000275036 BHLHE40O14503 412 aa12.27□□□□□ -0.45
HMGN3-201ENST00000275036 PHF1O43189 567 aaPredicted RBP12.27□□□□□ -0.45
HMGN3-201ENST00000275036 CDC14BO60729 498 aa12.27□□□□□ -0.45
HMGN3-201ENST00000275036 IGHV1-46P01743 117 aa12.27□□□□□ -0.45
HMGN3-201ENST00000275036 TFP02787 698 aa12.27□□□□□ -0.45
HMGN3-201ENST00000275036 GPR6P46095 362 aaPredicted RBP12.27□□□□□ -0.45
HMGN3-201ENST00000275036 CENPAP49450 140 aa12.27□□□□□ -0.45
HMGN3-201ENST00000275036 ZNF81P51508 661 aa12.27□□□□□ -0.45
HMGN3-201ENST00000275036 CDH15P55291 814 aa12.27□□□□□ -0.45
HMGN3-201ENST00000275036 PSG7Q13046 419 aa12.27□□□□□ -0.45
HMGN3-201ENST00000275036 HNRNPA0Q13151 305 aaKnown RBP12.27□□□□□ -0.45
HMGN3-201ENST00000275036 TSTQ16762 297 aaKnown RBP12.27□□□□□ -0.45
HMGN3-201ENST00000275036 CR1LQ2VPA4 569 aa12.27□□□□□ -0.45
HMGN3-201ENST00000275036 PCGF3Q3KNV8 242 aa12.27□□□□□ -0.45
HMGN3-201ENST00000275036 SPRNQ5BIV9 151 aa12.27□□□□□ -0.45
HMGN3-201ENST00000275036 ZNF362Q5T0B9 420 aaPredicted RBP12.27□□□□□ -0.45
HMGN3-201ENST00000275036 OR2T5Q6IEZ7 315 aa12.27□□□□□ -0.45
HMGN3-201ENST00000275036 CORO6Q6QEF8 472 aa12.27□□□□□ -0.45
HMGN3-201ENST00000275036 ZBTB46Q86UZ6 589 aa12.27□□□□□ -0.45
HMGN3-201ENST00000275036 NPEPL1Q8NDH3 523 aa12.27□□□□□ -0.45
HMGN3-201ENST00000275036 SLC26A10Q8NG04 563 aa12.27□□□□□ -0.45
HMGN3-201ENST00000275036 OR2T29Q8NH02 315 aa12.27□□□□□ -0.45
HMGN3-201ENST00000275036 OR1F12Q8NHA8 337 aa12.27□□□□□ -0.45
HMGN3-201ENST00000275036 CLDND2Q8NHS1 167 aa12.27□□□□□ -0.45
HMGN3-201ENST00000275036 HPS1Q92902 700 aa12.27□□□□□ -0.45
HMGN3-201ENST00000275036 DDOQ99489 341 aa12.27□□□□□ -0.45
HMGN3-201ENST00000275036 THTPAQ9BU02 230 aa12.27□□□□□ -0.45
HMGN3-201ENST00000275036 NARFLQ9H6Q4 476 aa12.27□□□□□ -0.45
HMGN3-201ENST00000275036 TBCCD1Q9NVR7 557 aa12.27□□□□□ -0.45
HMGN3-201ENST00000275036 LPAR3Q9UBY5 353 aa12.27□□□□□ -0.45
HMGN3-201ENST00000275036 KLHL21Q9UJP4 597 aa12.27□□□□□ -0.45
HMGN3-201ENST00000275036 STARD10Q9Y365 291 aa12.27□□□□□ -0.45
HMGN3-201ENST00000275036 GRIP1Q9Y3R0 1128 aa12.27□□□□□ -0.45
HMGN3-201ENST00000275036 CACNG2Q9Y698 323 aa12.27□□□□□ -0.45
HMGN3-201ENST00000275036 CDH10Q9Y6N8 788 aa12.27□□□□□ -0.45
HMGN3-201ENST00000275036 U3KQV3 271 aa12.27□□□□□ -0.45
HMGN3-201ENST00000275036 FAM157AC9JC47 383 aa12.26□□□□□ -0.45
HMGN3-201ENST00000275036 H3BSA7 217 aa12.26□□□□□ -0.45
HMGN3-201ENST00000275036 SPRY3O43610 288 aa12.26□□□□□ -0.45
HMGN3-201ENST00000275036 IDH3BO43837 385 aa12.26□□□□□ -0.45
HMGN3-201ENST00000275036 UBOX5O94941 541 aa12.26□□□□□ -0.45
HMGN3-201ENST00000275036 CCNB2O95067 398 aa12.26□□□□□ -0.45
HMGN3-201ENST00000275036 RENP00797 406 aa12.26□□□□□ -0.45
HMGN3-201ENST00000275036 IFNA2P01563 188 aa12.26□□□□□ -0.45
HMGN3-201ENST00000275036 NOS3P29474 1203 aa12.26□□□□□ -0.45
HMGN3-201ENST00000275036 CRYBB2P43320 205 aa12.26□□□□□ -0.45
HMGN3-201ENST00000275036 ERFP50548 548 aa12.26□□□□□ -0.45
HMGN3-201ENST00000275036 ARHGDIAP52565 204 aa12.26□□□□□ -0.45
HMGN3-201ENST00000275036 TMEM33P57088 247 aa12.26□□□□□ -0.45
HMGN3-201ENST00000275036 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.26□□□□□ -0.45
HMGN3-201ENST00000275036 MOGQ16653 247 aa12.26□□□□□ -0.45
HMGN3-201ENST00000275036 RSPO1Q2MKA7 263 aaPredicted RBP12.26□□□□□ -0.45
HMGN3-201ENST00000275036 DNM1P34Q6PK57 102 aa12.26□□□□□ -0.45
HMGN3-201ENST00000275036 UNQ6126/PRO20091Q6UXV3 157 aa12.26□□□□□ -0.45
HMGN3-201ENST00000275036 RASSF6Q6ZTQ3 369 aa12.26□□□□□ -0.45
HMGN3-201ENST00000275036 USP51Q70EK9 711 aa12.26□□□□□ -0.45
HMGN3-201ENST00000275036 TRPM8Q7Z2W7 1104 aa12.26□□□□□ -0.45
HMGN3-201ENST00000275036 LINC00346Q8IVM7 164 aa12.26□□□□□ -0.45
HMGN3-201ENST00000275036 C1orf174Q8IYL3 243 aa12.26□□□□□ -0.45
HMGN3-201ENST00000275036 ADGRG5Q8IZF4 528 aa12.26□□□□□ -0.45
HMGN3-201ENST00000275036 LINC00471Q8N535 108 aa12.26□□□□□ -0.45
HMGN3-201ENST00000275036 CYB561A3Q8NBI2 242 aa12.26□□□□□ -0.45
HMGN3-201ENST00000275036 AQP11Q8NBQ7 271 aa12.26□□□□□ -0.45
HMGN3-201ENST00000275036 OR52E2Q8NGJ4 325 aa12.26□□□□□ -0.45
HMGN3-201ENST00000275036 SPATA3Q8NHX4 192 aa12.26□□□□□ -0.45
HMGN3-201ENST00000275036 BCAS4Q8TDM0 211 aa12.26□□□□□ -0.45
HMGN3-201ENST00000275036 ZNRF4Q8WWF5 429 aa12.26□□□□□ -0.45
HMGN3-201ENST00000275036 MSL2Q9HCI7 577 aa12.26□□□□□ -0.45
HMGN3-201ENST00000275036 IL20Q9NYY1 176 aa12.26□□□□□ -0.45
HMGN3-201ENST00000275036 POLR1DQ9Y2S0 133 aa12.26□□□□□ -0.45
HMGN3-201ENST00000275036 FBN3Q75N90 2809 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms