RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 PLXDC2Q6UX71 529 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 BTLAQ7Z6A9 289 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 TUSC5Q8IXB3 177 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 RDH10Q8IZV5 341 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 OR10AC1Q8NH08 325 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 THRSPQ92748 146 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 PPP1R14AQ96A00 147 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 PRRG4Q9BZD6 226 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 MIXL1Q9H2W2 232 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 SLCO5A1Q9H2Y9 848 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 GPR35Q9HC97 309 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 GP6Q9HCN6 339 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 DDX28Q9NUL7 540 aaKnown RBP14.42□□□□□ -0.1
TPM1-201ENST00000267996 TMEM38BQ9NVV0 291 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 OR52A1Q9UKL2 312 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 CAMK2AQ9UQM7 478 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 CMAHPQ9Y471 501 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 CFAP47Q6ZTR5 3102 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 CEP295Q9C0D2 2601 aa14.41□□□□□ -0.1
TPM1-201ENST00000267996 TMEM269A0A1B0GVZ9 245 aa14.41□□□□□ -0.1
TPM1-201ENST00000267996 OR6C65A6NJZ3 312 aa14.41□□□□□ -0.1
TPM1-201ENST00000267996 MRPL33O75394 65 aaKnown RBP14.41□□□□□ -0.1
TPM1-201ENST00000267996 YES1P07947 543 aa14.41□□□□□ -0.1
TPM1-201ENST00000267996 SRMP19623 302 aa14.41□□□□□ -0.1
TPM1-201ENST00000267996 RAB3BP20337 219 aa14.41□□□□□ -0.1
TPM1-201ENST00000267996 CD40LGP29965 261 aa14.41□□□□□ -0.1
TPM1-201ENST00000267996 PPP5CP53041 499 aa14.41□□□□□ -0.1
TPM1-201ENST00000267996 TSPO2Q5TGU0 170 aa14.41□□□□□ -0.1
TPM1-201ENST00000267996 ADGRE4PQ86SQ3 457 aa14.41□□□□□ -0.1
TPM1-201ENST00000267996 GJC3Q8NFK1 279 aa14.41□□□□□ -0.1
TPM1-201ENST00000267996 ACOT12Q8WYK0 555 aa14.41□□□□□ -0.1
TPM1-201ENST00000267996 KCTD12Q96CX2 325 aaKnown RBP14.41□□□□□ -0.1
TPM1-201ENST00000267996 TAAR6Q96RI8 345 aa14.41□□□□□ -0.1
TPM1-201ENST00000267996 B3GNT3Q9Y2A9 372 aa14.41□□□□□ -0.1
TPM1-201ENST00000267996 WISP2O76076 250 aa14.4□□□□□ -0.1
TPM1-201ENST00000267996 CST2P09228 141 aa14.4□□□□□ -0.1
TPM1-201ENST00000267996 OCM2P0CE71 109 aa14.4□□□□□ -0.1
TPM1-201ENST00000267996 THBS2P35442 1172 aa14.4□□□□□ -0.1
TPM1-201ENST00000267996 OR10A3P58181 314 aa14.4□□□□□ -0.1
TPM1-201ENST00000267996 PSMA6P60900 246 aaKnown RBP14.4□□□□□ -0.1
TPM1-201ENST00000267996 DDI2Q5TDH0 399 aa14.4□□□□□ -0.1
TPM1-201ENST00000267996 RPUSD3Q6P087 351 aaKnown RBP14.4□□□□□ -0.1
TPM1-201ENST00000267996 SFXN4Q6P4A7 337 aa14.4□□□□□ -0.1
TPM1-201ENST00000267996 KLHL24Q6TFL4 600 aa14.4□□□□□ -0.1
TPM1-201ENST00000267996 ZNF704Q6ZNC4 412 aaPredicted RBP14.4□□□□□ -0.1
TPM1-201ENST00000267996 LAX1Q8IWV1 398 aa14.4□□□□□ -0.1
TPM1-201ENST00000267996 RBMXL3Q8N7X1 1067 aaKnown RBP14.4□□□□□ -0.1
TPM1-201ENST00000267996 OR51A4Q8NGJ6 313 aa14.4□□□□□ -0.1
TPM1-201ENST00000267996 ALKBH3Q96Q83 286 aaPredicted RBP14.4□□□□□ -0.1
TPM1-201ENST00000267996 ABCB9Q9NP78 766 aa14.4□□□□□ -0.1
TPM1-201ENST00000267996 ANKRD61A6NGH8 418 aa14.39□□□□□ -0.11
TPM1-201ENST00000267996 NOTOA8MTQ0 251 aa14.39□□□□□ -0.11
TPM1-201ENST00000267996 RPL36A-HNRNPH2H7BZ11 118 aa14.39□□□□□ -0.11
TPM1-201ENST00000267996 K7ENP7 123 aa14.39□□□□□ -0.11
TPM1-201ENST00000267996 TGM6O95932 706 aa14.39□□□□□ -0.11
TPM1-201ENST00000267996 ACHEP22303 614 aa14.39□□□□□ -0.11
TPM1-201ENST00000267996 GRB2P62993 217 aaKnown RBP14.39□□□□□ -0.11
TPM1-201ENST00000267996 CEACAM16Q2WEN9 425 aa14.39□□□□□ -0.11
TPM1-201ENST00000267996 NRN1LQ496H8 165 aa14.39□□□□□ -0.11
TPM1-201ENST00000267996 CCDC92Q53HC0 331 aaPredicted RBP14.39□□□□□ -0.11
TPM1-201ENST00000267996 INO80CQ6PI98 192 aaPredicted RBP14.39□□□□□ -0.11
TPM1-201ENST00000267996 ELMOD2Q8IZ81 293 aa14.39□□□□□ -0.11
TPM1-201ENST00000267996 PARP16Q8N5Y8 322 aa14.39□□□□□ -0.11
TPM1-201ENST00000267996 FBXO17Q96EF6 278 aa14.39□□□□□ -0.11
TPM1-201ENST00000267996 SLC30A2Q9BRI3 323 aa14.39□□□□□ -0.11
TPM1-201ENST00000267996 MOB1AQ9H8S9 216 aa14.39□□□□□ -0.11
TPM1-201ENST00000267996 CALHM2Q9HA72 323 aa14.39□□□□□ -0.11
TPM1-201ENST00000267996 SLC7A10Q9NS82 523 aa14.39□□□□□ -0.11
TPM1-201ENST00000267996 FRYQ5TBA9 3013 aa14.39□□□□□ -0.11
TPM1-201ENST00000267996 SLC22A20A6NK97 555 aa14.39□□□□□ -0.11
TPM1-201ENST00000267996 MKRN2OSH3BPM6 223 aa14.39□□□□□ -0.11
TPM1-201ENST00000267996 K7EM74 188 aa14.39□□□□□ -0.11
TPM1-201ENST00000267996 RGS5O15539 181 aa14.39□□□□□ -0.11
TPM1-201ENST00000267996 APEX1P27695 318 aaKnown RBP14.39□□□□□ -0.11
TPM1-201ENST00000267996 SOX2P48431 317 aa14.39□□□□□ -0.11
TPM1-201ENST00000267996 PPP3R1P63098 170 aa14.39□□□□□ -0.11
TPM1-201ENST00000267996 SPANXN2Q5MJ10 180 aa14.39□□□□□ -0.11
TPM1-201ENST00000267996 BCL2L15Q5TBC7 163 aa14.39□□□□□ -0.11
TPM1-201ENST00000267996 TMEM244Q5VVB8 128 aa14.39□□□□□ -0.11
TPM1-201ENST00000267996 MZT2AQ6P582 158 aa14.39□□□□□ -0.11
TPM1-201ENST00000267996 SYT9Q86SS6 491 aa14.39□□□□□ -0.11
TPM1-201ENST00000267996 ORAI1Q96D31 301 aa14.39□□□□□ -0.11
TPM1-201ENST00000267996 CEP19Q96LK0 163 aa14.39□□□□□ -0.11
TPM1-201ENST00000267996 GFI1Q99684 422 aa14.39□□□□□ -0.11
TPM1-201ENST00000267996 FOXB1Q99853 325 aa14.39□□□□□ -0.11
TPM1-201ENST00000267996 CLCF1Q9UBD9 225 aa14.39□□□□□ -0.11
TPM1-201ENST00000267996 NUFIP1Q9UHK0 495 aaKnown RBP14.39□□□□□ -0.11
TPM1-201ENST00000267996 CLEC4AQ9UMR7 237 aa14.39□□□□□ -0.11
TPM1-201ENST00000267996 GTF2A1LQ9UNN4 478 aa14.39□□□□□ -0.11
TPM1-201ENST00000267996 PDCD5O14737 125 aa14.38□□□□□ -0.11
TPM1-201ENST00000267996 TTRP02766 147 aa14.38□□□□□ -0.11
TPM1-201ENST00000267996 UBCP0CG48 685 aaKnown RBP14.38□□□□□ -0.11
TPM1-201ENST00000267996 EPXP11678 715 aa14.38□□□□□ -0.11
TPM1-201ENST00000267996 FCGR2AP12318 317 aa14.38□□□□□ -0.11
TPM1-201ENST00000267996 ODF4Q2M2E3 257 aa14.38□□□□□ -0.11
TPM1-201ENST00000267996 SLC25A35Q3KQZ1 300 aa14.38□□□□□ -0.11
TPM1-201ENST00000267996 IDNKQ5T6J7 187 aa14.38□□□□□ -0.11
TPM1-201ENST00000267996 C16orf87Q6PH81 154 aa14.38□□□□□ -0.11
TPM1-201ENST00000267996 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.38□□□□□ -0.11
TPM1-201ENST00000267996 LRRTM1Q86UE6 522 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms