RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 RAB35Q15286 201 aa12.38□□□□□ -0.43
SSBP1-201ENST00000265304 ZNF684Q5T5D7 378 aa12.38□□□□□ -0.43
SSBP1-201ENST00000265304 ADAM5Q6NVV9 412 aa12.38□□□□□ -0.43
SSBP1-201ENST00000265304 TMEM108Q6UXF1 575 aa12.38□□□□□ -0.43
SSBP1-201ENST00000265304 TUBA1AQ71U36 451 aa12.38□□□□□ -0.43
SSBP1-201ENST00000265304 MYPOPQ86VE0 399 aaPredicted RBP12.38□□□□□ -0.43
SSBP1-201ENST00000265304 ZNF295-AS1Q8N0V1 137 aa12.38□□□□□ -0.43
SSBP1-201ENST00000265304 OR2T27Q8NH04 317 aa12.38□□□□□ -0.43
SSBP1-201ENST00000265304 CNN2Q99439 309 aaKnown RBP12.38□□□□□ -0.43
SSBP1-201ENST00000265304 ZNF649Q9BS31 505 aa12.38□□□□□ -0.43
SSBP1-201ENST00000265304 ABHD6Q9BV23 337 aa12.38□□□□□ -0.43
SSBP1-201ENST00000265304 ESRP2Q9H6T0 727 aaKnown RBP12.38□□□□□ -0.43
SSBP1-201ENST00000265304 FGF20Q9NP95 211 aaPredicted RBP12.38□□□□□ -0.43
SSBP1-201ENST00000265304 CCNB1IP1Q9NPC3 277 aa12.38□□□□□ -0.43
SSBP1-201ENST00000265304 FKBP14Q9NWM8 211 aa12.38□□□□□ -0.43
SSBP1-201ENST00000265304 RPL36Q9Y3U8 105 aaKnown RBP12.38□□□□□ -0.43
SSBP1-201ENST00000265304 PCDHGB1Q9Y5G3 927 aa12.38□□□□□ -0.43
SSBP1-201ENST00000265304 TMEM14AQ9Y6G1 99 aa12.38□□□□□ -0.43
SSBP1-201ENST00000265304 NBPF19A0A087WUL8 3843 aa12.38□□□□□ -0.43
SSBP1-201ENST00000265304 LOC100509620A0A075B734 347 aa12.37□□□□□ -0.43
SSBP1-201ENST00000265304 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.37□□□□□ -0.43
SSBP1-201ENST00000265304 A1L4Q6 167 aa12.37□□□□□ -0.43
SSBP1-201ENST00000265304 A6NNC1 897 aa12.37□□□□□ -0.43
SSBP1-201ENST00000265304 SELENOFO60613 162 aa12.37□□□□□ -0.43
SSBP1-201ENST00000265304 RAB36O95755 333 aa12.37□□□□□ -0.43
SSBP1-201ENST00000265304 IGHA1P01876 353 aa12.37□□□□□ -0.43
SSBP1-201ENST00000265304 CCDC159P0C7I6 412 aa12.37□□□□□ -0.43
SSBP1-201ENST00000265304 PIPP12273 146 aaPredicted RBP12.37□□□□□ -0.43
SSBP1-201ENST00000265304 DCTDP32321 178 aa12.37□□□□□ -0.43
SSBP1-201ENST00000265304 RPS7P62081 194 aaKnown RBP12.37□□□□□ -0.43
SSBP1-201ENST00000265304 NAAAQ02083 359 aa12.37□□□□□ -0.43
SSBP1-201ENST00000265304 PLP2Q04941 152 aa12.37□□□□□ -0.43
SSBP1-201ENST00000265304 RAB39AQ14964 217 aa12.37□□□□□ -0.43
SSBP1-201ENST00000265304 KLHL22Q53GT1 634 aa12.37□□□□□ -0.43
SSBP1-201ENST00000265304 ELFN2Q5R3F8 820 aa12.37□□□□□ -0.43
SSBP1-201ENST00000265304 C6orf141Q5SZD1 244 aa12.37□□□□□ -0.43
SSBP1-201ENST00000265304 ZNF774Q6NX45 483 aa12.37□□□□□ -0.43
SSBP1-201ENST00000265304 CORO6Q6QEF8 472 aa12.37□□□□□ -0.43
SSBP1-201ENST00000265304 CFAP77Q6ZQR2 320 aa12.37□□□□□ -0.43
SSBP1-201ENST00000265304 COLCA1Q6ZS62 124 aa12.37□□□□□ -0.43
SSBP1-201ENST00000265304 WFDC8Q8IUA0 241 aa12.37□□□□□ -0.43
SSBP1-201ENST00000265304 ERI1Q8IV48 349 aaKnown RBP12.37□□□□□ -0.43
SSBP1-201ENST00000265304 OR2AJ1Q8NGZ0 328 aa12.37□□□□□ -0.43
SSBP1-201ENST00000265304 OR1F12Q8NHA8 337 aa12.37□□□□□ -0.43
SSBP1-201ENST00000265304 CNIH3Q8TBE1 160 aa12.37□□□□□ -0.43
SSBP1-201ENST00000265304 ASB17Q8WXJ9 295 aa12.37□□□□□ -0.43
SSBP1-201ENST00000265304 LGALS12Q96DT0 336 aa12.37□□□□□ -0.43
SSBP1-201ENST00000265304 DCLRE1CQ96SD1 692 aaKnown RBP12.37□□□□□ -0.43
SSBP1-201ENST00000265304 CDADC1Q9BWV3 514 aa12.37□□□□□ -0.43
SSBP1-201ENST00000265304 RNF121Q9H920 327 aa12.37□□□□□ -0.43
SSBP1-201ENST00000265304 CNOT2Q9NZN8 540 aaKnown RBP12.37□□□□□ -0.43
SSBP1-201ENST00000265304 POLQO75417 2590 aa12.37□□□□□ -0.43
SSBP1-201ENST00000265304 LRBAP50851 2863 aa12.37□□□□□ -0.43
SSBP1-201ENST00000265304 IGHV2OR16-5A0A0B4J2B6 119 aa12.36□□□□□ -0.43
SSBP1-201ENST00000265304 IQCMA0A1B0GVH7 501 aa12.36□□□□□ -0.43
SSBP1-201ENST00000265304 J3QW42 95 aa12.36□□□□□ -0.43
SSBP1-201ENST00000265304 PHYHO14832 338 aa12.36□□□□□ -0.43
SSBP1-201ENST00000265304 CTAG2O75638 210 aa12.36□□□□□ -0.43
SSBP1-201ENST00000265304 CELA3BP08861 270 aa12.36□□□□□ -0.43
SSBP1-201ENST00000265304 COX6B1P14854 86 aa12.36□□□□□ -0.43
SSBP1-201ENST00000265304 STOMP27105 288 aa12.36□□□□□ -0.43
SSBP1-201ENST00000265304 OPRL1P41146 370 aa12.36□□□□□ -0.43
SSBP1-201ENST00000265304 ZNF83P51522 516 aa12.36□□□□□ -0.43
SSBP1-201ENST00000265304 IDH3GP51553 393 aaPredicted RBP12.36□□□□□ -0.43
SSBP1-201ENST00000265304 NKX6-1P78426 367 aaPredicted RBP12.36□□□□□ -0.43
SSBP1-201ENST00000265304 BSPH1Q075Z2 132 aa12.36□□□□□ -0.43
SSBP1-201ENST00000265304 SMN1Q16637 294 aaKnown RBP12.36□□□□□ -0.43
SSBP1-201ENST00000265304 OTPQ5XKR4 325 aa12.36□□□□□ -0.43
SSBP1-201ENST00000265304 DCXRQ7Z4W1 244 aa12.36□□□□□ -0.43
SSBP1-201ENST00000265304 LINC00346Q8IVM7 164 aa12.36□□□□□ -0.43
SSBP1-201ENST00000265304 C1orf174Q8IYL3 243 aa12.36□□□□□ -0.43
SSBP1-201ENST00000265304 OR1J2Q8NGS2 313 aa12.36□□□□□ -0.43
SSBP1-201ENST00000265304 OR6N2Q8NGY6 317 aa12.36□□□□□ -0.43
SSBP1-201ENST00000265304 RNFT2Q96EX2 444 aa12.36□□□□□ -0.43
SSBP1-201ENST00000265304 ZC3HAV1LQ96H79 300 aaKnown RBP12.36□□□□□ -0.43
SSBP1-201ENST00000265304 SIGLEC11Q96RL6 698 aa12.36□□□□□ -0.43
SSBP1-201ENST00000265304 AMELYQ99218 206 aa12.36□□□□□ -0.43
SSBP1-201ENST00000265304 DUSP21Q9H596 190 aa12.36□□□□□ -0.43
SSBP1-201ENST00000265304 INPP5EQ9NRR6 644 aa12.36□□□□□ -0.43
SSBP1-201ENST00000265304 PLEK2Q9NYT0 353 aa12.36□□□□□ -0.43
SSBP1-201ENST00000265304 PSORS1C1Q9UIG5 152 aa12.36□□□□□ -0.43
SSBP1-201ENST00000265304 KLHDC2Q9Y2U9 406 aa12.36□□□□□ -0.43
SSBP1-201ENST00000265304 ARID1AO14497 2285 aa12.35□□□□□ -0.43
SSBP1-201ENST00000265304 IRGMA1A4Y4 181 aa12.35□□□□□ -0.43
SSBP1-201ENST00000265304 SHISA9B4DS77 424 aa12.35□□□□□ -0.43
SSBP1-201ENST00000265304 ZNF254O75437 659 aa12.35□□□□□ -0.43
SSBP1-201ENST00000265304 FADS2O95864 444 aaKnown RBP12.35□□□□□ -0.43
SSBP1-201ENST00000265304 LYNP07948 512 aa12.35□□□□□ -0.43
SSBP1-201ENST00000265304 SPARCP09486 303 aa12.35□□□□□ -0.43
SSBP1-201ENST00000265304 TUBG1P23258 451 aa12.35□□□□□ -0.43
SSBP1-201ENST00000265304 APEX1P27695 318 aaKnown RBP12.35□□□□□ -0.43
SSBP1-201ENST00000265304 DCKP27707 260 aa12.35□□□□□ -0.43
SSBP1-201ENST00000265304 RPS27P42677 84 aaKnown RBP12.35□□□□□ -0.43
SSBP1-201ENST00000265304 CAPZA2P47755 286 aa12.35□□□□□ -0.43
SSBP1-201ENST00000265304 ACTC1P68032 377 aa12.35□□□□□ -0.43
SSBP1-201ENST00000265304 ACTA1P68133 377 aa12.35□□□□□ -0.43
SSBP1-201ENST00000265304 HGFACQ04756 655 aa12.35□□□□□ -0.43
SSBP1-201ENST00000265304 EGR3Q06889 387 aa12.35□□□□□ -0.43
SSBP1-201ENST00000265304 RNLSQ5VYX0 342 aa12.35□□□□□ -0.43
SSBP1-201ENST00000265304 SLC35F2Q8IXU6 374 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms