RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 H3BQ06 376 aaPredicted RBP16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 ELAVL1Q15717 326 aaKnown RBP16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 APH1BQ8WW43 257 aa16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 TEX37Q96LM6 180 aa16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 ERVMER34-1Q9H9K5 563 aa16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 HCFC2Q9Y5Z7 792 aa16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 H3BNC9 293 aa16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 RPL7P18124 248 aaKnown RBP16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 CYB561P49447 251 aa16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 ADGRF3Q8IZF5 1079 aa16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 GOT1L1Q8NHS2 421 aaPredicted RBP16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 WNK2Q9Y3S1 2297 aa16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 HSF1Q00613 529 aa16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 B3GALT5Q9Y2C3 310 aa16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 NPPBP16860 134 aa16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 RPS19P39019 145 aaKnown RBP16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 CDC20BQ86Y33 519 aa16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 TOX2Q96NM4 488 aa16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 KIR2DL3P43628 341 aa16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 RTL8BQ17RB0 113 aa16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 TRNP1Q6NT89 227 aa16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 PGBD5Q8N414 524 aa16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 OR13C8Q8NGS7 320 aa16.01■□□□□ 0.15
NOTCH3-201ENST00000263388 LIM2P55344 173 aa16■□□□□ 0.15
NOTCH3-201ENST00000263388 ZNF718Q3SXZ3 478 aa16■□□□□ 0.15
NOTCH3-201ENST00000263388 PLXDC2Q6UX71 529 aa16■□□□□ 0.15
NOTCH3-201ENST00000263388 SH3BGRL2Q9UJC5 107 aa16■□□□□ 0.15
NOTCH3-201ENST00000263388 POLEQ07864 2286 aa16■□□□□ 0.15
NOTCH3-201ENST00000263388 MN1Q10571 1320 aaPredicted RBP16■□□□□ 0.15
NOTCH3-201ENST00000263388 OR6C68A6NDL8 312 aa16■□□□□ 0.15
NOTCH3-201ENST00000263388 ADRA2CP18825 462 aa16■□□□□ 0.15
NOTCH3-201ENST00000263388 ACKR3P25106 362 aa16■□□□□ 0.15
NOTCH3-201ENST00000263388 LIPAP38571 399 aa16■□□□□ 0.15
NOTCH3-201ENST00000263388 RPL27P61353 136 aaKnown RBP16■□□□□ 0.15
NOTCH3-201ENST00000263388 OR5M8Q8NGP6 311 aa16■□□□□ 0.15
NOTCH3-201ENST00000263388 APH1AQ96BI3 265 aa16■□□□□ 0.15
NOTCH3-201ENST00000263388 CSF3RQ99062 836 aa16■□□□□ 0.15
NOTCH3-201ENST00000263388 CDCA4Q9BXL8 241 aa16■□□□□ 0.15
NOTCH3-201ENST00000263388 VRK3Q8IV63 474 aa16■□□□□ 0.15
NOTCH3-201ENST00000263388 BOD1Q96IK1 185 aa16■□□□□ 0.15
NOTCH3-201ENST00000263388 CHRDL1Q9BU40 450 aa16■□□□□ 0.15
NOTCH3-201ENST00000263388 SLC25A32Q9H2D1 315 aa16■□□□□ 0.15
NOTCH3-201ENST00000263388 FUNDC1Q8IVP5 155 aa16■□□□□ 0.15
NOTCH3-201ENST00000263388 GABARAPL3Q9BY60 117 aa16■□□□□ 0.15
NOTCH3-201ENST00000263388 DNMT3BQ9UBC3 853 aaKnown RBP16■□□□□ 0.15
NOTCH3-201ENST00000263388 EIF4E2O60573 245 aaKnown RBP16■□□□□ 0.15
NOTCH3-201ENST00000263388 TXNDC12O95881 172 aa16■□□□□ 0.15
NOTCH3-201ENST00000263388 LMNTD1Q8N9Z9 388 aa16■□□□□ 0.15
NOTCH3-201ENST00000263388 HSD17B11Q8NBQ5 300 aa16■□□□□ 0.15
NOTCH3-201ENST00000263388 GNPNAT1Q96EK6 184 aaPredicted RBP16■□□□□ 0.15
NOTCH3-201ENST00000263388 SLC22A12Q96S37 553 aa16■□□□□ 0.15
NOTCH3-201ENST00000263388 GABARAPL1Q9H0R8 117 aa16■□□□□ 0.15
NOTCH3-201ENST00000263388 ARL2-SNX15V9GYD0 113 aa16■□□□□ 0.15
NOTCH3-201ENST00000263388 ARRDC5A6NEK1 342 aa16■□□□□ 0.15
NOTCH3-201ENST00000263388 BCL6P41182 706 aa16■□□□□ 0.15
NOTCH3-201ENST00000263388 KIAA0141Q14154 515 aaPredicted RBP16■□□□□ 0.15
NOTCH3-201ENST00000263388 ZNF239Q16600 458 aaKnown RBP16■□□□□ 0.15
NOTCH3-201ENST00000263388 LPAL2Q16609 132 aa16■□□□□ 0.15
NOTCH3-201ENST00000263388 ZNF626Q68DY1 528 aa16■□□□□ 0.15
NOTCH3-201ENST00000263388 LIN7CQ9NUP9 197 aaKnown RBP16■□□□□ 0.15
NOTCH3-201ENST00000263388 ADAMTSL3P82987 1691 aa16■□□□□ 0.15
NOTCH3-201ENST00000263388 SCN5AQ14524 2016 aa16■□□□□ 0.15
NOTCH3-201ENST00000263388 OR6C76A6NM76 312 aa16■□□□□ 0.15
NOTCH3-201ENST00000263388 XKR7Q5GH72 579 aa16■□□□□ 0.15
NOTCH3-201ENST00000263388 HS3ST3A1Q9Y663 406 aa16■□□□□ 0.15
NOTCH3-201ENST00000263388 XIRP1Q702N8 1843 aaKnown RBP15.99■□□□□ 0.15
NOTCH3-201ENST00000263388 MBP02144 154 aa15.99■□□□□ 0.15
NOTCH3-201ENST00000263388 ZNF236Q9UL36 1845 aa15.99■□□□□ 0.15
NOTCH3-201ENST00000263388 ST8SIA3O43173 380 aa15.99■□□□□ 0.15
NOTCH3-201ENST00000263388 ACHEP22303 614 aa15.99■□□□□ 0.15
NOTCH3-201ENST00000263388 ENDOGQ14249 297 aaKnown RBP15.99■□□□□ 0.15
NOTCH3-201ENST00000263388 DLEU7Q6UYE1 221 aa15.99■□□□□ 0.15
NOTCH3-201ENST00000263388 SMIM19Q96E16 107 aa15.99■□□□□ 0.15
NOTCH3-201ENST00000263388 TMEM43Q9BTV4 400 aa15.99■□□□□ 0.15
NOTCH3-201ENST00000263388 SSSCA1O60232 199 aa15.99■□□□□ 0.15
NOTCH3-201ENST00000263388 LGALS4P56470 323 aa15.99■□□□□ 0.15
NOTCH3-201ENST00000263388 KIAA1024LP59773 190 aa15.99■□□□□ 0.15
NOTCH3-201ENST00000263388 CHST11Q9NPF2 352 aa15.99■□□□□ 0.15
NOTCH3-201ENST00000263388 UMAD1C9J7I0 102 aa15.99■□□□□ 0.15
NOTCH3-201ENST00000263388 HS3ST1O14792 307 aa15.99■□□□□ 0.15
NOTCH3-201ENST00000263388 NKX2-1P43699 371 aaPredicted RBP15.99■□□□□ 0.15
NOTCH3-201ENST00000263388 CDK5Q00535 292 aa15.99■□□□□ 0.15
NOTCH3-201ENST00000263388 SSBP1Q04837 148 aaKnown RBP15.99■□□□□ 0.15
NOTCH3-201ENST00000263388 NKAIN2Q5VXU1 208 aa15.99■□□□□ 0.15
NOTCH3-201ENST00000263388 LHFPL2Q6ZUX7 228 aa15.99■□□□□ 0.15
NOTCH3-201ENST00000263388 ZNF740Q8NDX6 193 aa15.99■□□□□ 0.15
NOTCH3-201ENST00000263388 ATF6BQ99941 703 aa15.99■□□□□ 0.15
NOTCH3-201ENST00000263388 NDRG4Q9ULP0 352 aaKnown RBP15.99■□□□□ 0.15
NOTCH3-201ENST00000263388 A0A0A6YYJ9 748 aa15.99■□□□□ 0.15
NOTCH3-201ENST00000263388 MMP11P24347 488 aa15.99■□□□□ 0.15
NOTCH3-201ENST00000263388 SDHAP31040 664 aa15.99■□□□□ 0.15
NOTCH3-201ENST00000263388 EDDM3BP56851 147 aa15.99■□□□□ 0.15
NOTCH3-201ENST00000263388 PRTGQ2VWP7 1150 aa15.99■□□□□ 0.15
NOTCH3-201ENST00000263388 SLC24A4Q8NFF2 622 aa15.99■□□□□ 0.15
NOTCH3-201ENST00000263388 NTNG1Q9Y2I2 539 aa15.99■□□□□ 0.15
NOTCH3-201ENST00000263388 SLC7A6Q92536 515 aa15.99■□□□□ 0.15
NOTCH3-201ENST00000263388 ZIC5Q96T25 663 aa15.99■□□□□ 0.15
NOTCH3-201ENST00000263388 TERTO14746 1132 aaKnown RBP15.98■□□□□ 0.15
NOTCH3-201ENST00000263388 FAM26EQ8N5C1 309 aa15.98■□□□□ 0.15
NOTCH3-201ENST00000263388 OR51A4Q8NGJ6 313 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms