RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 PLATP00750 562 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 IGHMP01871 453 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 CD3GP09693 182 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 PTHLHP12272 177 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 ZNF823P16415 610 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 RFC3P40938 356 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 DAP3P51398 398 aaKnown RBP12.1□□□□□ -0.47
VMP1-201ENST00000262291 RAB14P61106 215 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 YRDCQ86U90 279 aaKnown RBP12.1□□□□□ -0.47
VMP1-201ENST00000262291 UEVLDQ8IX04 471 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 TEX19Q8NA77 164 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 DUSP18Q8NEJ0 188 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 TMEM106AQ96A25 262 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 RADILQ96JH8 1075 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 C4orf45Q96LM5 186 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 UCN2Q96RP3 112 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 UBQLN2Q9UHD9 624 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 DKKL1Q9UK85 242 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 FARSAQ9Y285 508 aaKnown RBP12.1□□□□□ -0.47
VMP1-201ENST00000262291 EMC9Q9Y3B6 208 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 IGLV3-32A0A0A0MS00 114 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 SIGLEC5O15389 551 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 SEC14L5O43304 696 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 CAPZA2P47755 286 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 EGR3Q06889 387 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 ZNF528Q3MIS6 628 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 LGALSLQ3ZCW2 172 aaPredicted RBP12.1□□□□□ -0.47
VMP1-201ENST00000262291 Q499Y3 187 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 CLLU1Q5K131 121 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 C5orf46Q6UWT4 87 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 FCRLAQ7L513 359 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 LRRC28Q86X40 367 aaPredicted RBP12.1□□□□□ -0.47
VMP1-201ENST00000262291 SLC26A10Q8NG04 563 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 OR1J4Q8NGS1 313 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 RPS4Y2Q8TD47 263 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 POTEKPQ9BYX7 375 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 TCF7L1Q9HCS4 588 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 P4HTMQ9NXG6 502 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 TMEM14AQ9Y6G1 99 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 DMXL1Q9Y485 3027 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 LMX1BO60663 402 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 SLC43A1O75387 559 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 IFNA7P01567 189 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 NPR2P20594 1047 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 CRABP1P29762 137 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 P2RY4P51582 365 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 OC90Q02509 493 aaPredicted RBP12.1□□□□□ -0.47
VMP1-201ENST00000262291 ZP4Q12836 540 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 HYAL4Q2M3T9 481 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 STAC2Q6ZMT1 411 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 C17orf107Q6ZR85 190 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 KRT74Q7RTS7 529 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 ZNF679Q8IYX0 411 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 C11orf40Q8WZ69 217 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 SORCS2Q96PQ0 1159 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 TAAR9Q96RI9 348 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 B3GALT5Q9Y2C3 310 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 ZNF175Q9Y473 711 aa12.1□□□□□ -0.47
VMP1-201ENST00000262291 OR2M5A3KFT3 312 aa12.09□□□□□ -0.47
VMP1-201ENST00000262291 A6NIZ1 184 aa12.09□□□□□ -0.47
VMP1-201ENST00000262291 ZNF98A6NK75 572 aa12.09□□□□□ -0.47
VMP1-201ENST00000262291 ZIC3O60481 467 aa12.09□□□□□ -0.47
VMP1-201ENST00000262291 ZNF883P0CG24 379 aa12.09□□□□□ -0.47
VMP1-201ENST00000262291 LIFP15018 202 aa12.09□□□□□ -0.47
VMP1-201ENST00000262291 NUP62P37198 522 aaPredicted RBP12.09□□□□□ -0.47
VMP1-201ENST00000262291 PITPNBP48739 271 aa12.09□□□□□ -0.47
VMP1-201ENST00000262291 CLRN1P58418 232 aa12.09□□□□□ -0.47
VMP1-201ENST00000262291 RAP1BP61224 184 aa12.09□□□□□ -0.47
VMP1-201ENST00000262291 RAP1AP62834 184 aa12.09□□□□□ -0.47
VMP1-201ENST00000262291 RPS15P62841 145 aaKnown RBP12.09□□□□□ -0.47
VMP1-201ENST00000262291 DGCR2P98153 550 aa12.09□□□□□ -0.47
VMP1-201ENST00000262291 SLC25A53Q5H9E4 307 aa12.09□□□□□ -0.47
VMP1-201ENST00000262291 TMPRSS12Q86WS5 348 aa12.09□□□□□ -0.47
VMP1-201ENST00000262291 DCBLD2Q96PD2 775 aa12.09□□□□□ -0.47
VMP1-201ENST00000262291 COMMD4Q9H0A8 199 aa12.09□□□□□ -0.47
VMP1-201ENST00000262291 MRPL15Q9P015 296 aaKnown RBP12.09□□□□□ -0.47
VMP1-201ENST00000262291 KCNMB2Q9Y691 235 aa12.09□□□□□ -0.47
VMP1-201ENST00000262291 RFPL3SP0C7P2 107 aa12.09□□□□□ -0.47
VMP1-201ENST00000262291 CMTM4Q8IZR5 234 aa12.09□□□□□ -0.47
VMP1-201ENST00000262291 BEST4Q8NFU0 473 aa12.09□□□□□ -0.47
VMP1-201ENST00000262291 MS4A3Q96HJ5 214 aa12.09□□□□□ -0.47
VMP1-201ENST00000262291 GAL3ST1Q99999 423 aa12.09□□□□□ -0.47
VMP1-201ENST00000262291 SEC22CQ9BRL7 303 aa12.09□□□□□ -0.47
VMP1-201ENST00000262291 THAP7Q9BT49 309 aaPredicted RBP12.09□□□□□ -0.47
VMP1-201ENST00000262291 ANGPTL4Q9BY76 406 aa12.09□□□□□ -0.47
VMP1-201ENST00000262291 IFT22Q9H7X7 185 aa12.09□□□□□ -0.47
VMP1-201ENST00000262291 FANCFQ9NPI8 374 aa12.09□□□□□ -0.47
VMP1-201ENST00000262291 NCKAP5O14513 1909 aa12.08□□□□□ -0.48
VMP1-201ENST00000262291 MED13Q9UHV7 2174 aa12.08□□□□□ -0.48
VMP1-201ENST00000262291 IFITM5A6NNB3 132 aa12.08□□□□□ -0.48
VMP1-201ENST00000262291 ETV2O00321 342 aaPredicted RBP12.08□□□□□ -0.48
VMP1-201ENST00000262291 TNFSF11O14788 317 aa12.08□□□□□ -0.48
VMP1-201ENST00000262291 TRAF3IP2O43734 574 aaPredicted RBP12.08□□□□□ -0.48
VMP1-201ENST00000262291 MT-CO3P00414 261 aa12.08□□□□□ -0.48
VMP1-201ENST00000262291 DLSTP36957 453 aa12.08□□□□□ -0.48
VMP1-201ENST00000262291 BEST3Q8N1M1 668 aa12.08□□□□□ -0.48
VMP1-201ENST00000262291 STPG2Q8N412 459 aa12.08□□□□□ -0.48
VMP1-201ENST00000262291 OR52N5Q8NH56 324 aa12.08□□□□□ -0.48
VMP1-201ENST00000262291 PAQR8Q8TEZ7 354 aa12.08□□□□□ -0.48
VMP1-201ENST00000262291 KIAA1143Q96AT1 154 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms