RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 TCTN3Q6NUS6 607 aa11.84□□□□□ -0.51
TMEM260-201ENST00000261556 RIF1Q5UIP0 2472 aaKnown RBP11.84□□□□□ -0.51
TMEM260-201ENST00000261556 M0QZK8 103 aa11.84□□□□□ -0.51
TMEM260-201ENST00000261556 GGCTO75223 188 aaKnown RBP11.84□□□□□ -0.51
TMEM260-201ENST00000261556 IGFBP6P24592 240 aaPredicted RBP11.84□□□□□ -0.51
TMEM260-201ENST00000261556 HOXD9P28356 352 aaPredicted RBP11.84□□□□□ -0.51
TMEM260-201ENST00000261556 GABREP78334 506 aa11.84□□□□□ -0.51
TMEM260-201ENST00000261556 DOC2BQ14184 412 aa11.84□□□□□ -0.51
TMEM260-201ENST00000261556 HERPUD1Q15011 391 aa11.84□□□□□ -0.51
TMEM260-201ENST00000261556 C19orf48Q6RUI8 117 aa11.84□□□□□ -0.51
TMEM260-201ENST00000261556 CD300LGQ6UXG3 332 aa11.84□□□□□ -0.51
TMEM260-201ENST00000261556 ADIPOR2Q86V24 386 aa11.84□□□□□ -0.51
TMEM260-201ENST00000261556 SPPL3Q8TCT6 385 aa11.84□□□□□ -0.51
TMEM260-201ENST00000261556 HIST1H2AAQ96QV6 131 aa11.84□□□□□ -0.51
TMEM260-201ENST00000261556 APOOQ9BUR5 198 aa11.84□□□□□ -0.51
TMEM260-201ENST00000261556 HCAR1Q9BXC0 346 aa11.84□□□□□ -0.51
TMEM260-201ENST00000261556 CHST5Q9GZS9 411 aa11.84□□□□□ -0.51
TMEM260-201ENST00000261556 SEBOXQ9HB31 216 aaPredicted RBP11.84□□□□□ -0.51
TMEM260-201ENST00000261556 SEMA4GQ9NTN9 838 aa11.84□□□□□ -0.51
TMEM260-201ENST00000261556 BTAF1O14981 1849 aa11.84□□□□□ -0.51
TMEM260-201ENST00000261556 SVILO95425 2214 aa11.84□□□□□ -0.51
TMEM260-201ENST00000261556 FITM1A5D6W6 292 aa11.83□□□□□ -0.51
TMEM260-201ENST00000261556 TIMP2P16035 220 aa11.83□□□□□ -0.51
TMEM260-201ENST00000261556 RCC1P18754 421 aaPredicted RBP11.83□□□□□ -0.51
TMEM260-201ENST00000261556 LSM6P62312 80 aaKnown RBP11.83□□□□□ -0.51
TMEM260-201ENST00000261556 LSM11P83369 360 aaKnown RBP eCLIP11.83□□□□□ -0.51
TMEM260-201ENST00000261556 PAX5Q02548 391 aa11.83□□□□□ -0.51
TMEM260-201ENST00000261556 TMEM244Q5VVB8 128 aa11.83□□□□□ -0.51
TMEM260-201ENST00000261556 RPL7L1Q6DKI1 246 aaKnown RBP11.83□□□□□ -0.51
TMEM260-201ENST00000261556 RPUSD3Q6P087 351 aaKnown RBP11.83□□□□□ -0.51
TMEM260-201ENST00000261556 PLXDC1Q8IUK5 500 aa11.83□□□□□ -0.51
TMEM260-201ENST00000261556 ZNF709Q8N972 641 aa11.83□□□□□ -0.51
TMEM260-201ENST00000261556 RASGEF1AQ8N9B8 481 aa11.83□□□□□ -0.51
TMEM260-201ENST00000261556 C17orf47Q8NEP4 570 aa11.83□□□□□ -0.51
TMEM260-201ENST00000261556 DAZLQ92904 295 aaKnown RBP11.83□□□□□ -0.51
TMEM260-201ENST00000261556 NPDC1Q9NQX5 325 aaPredicted RBP11.83□□□□□ -0.51
TMEM260-201ENST00000261556 LAMP3Q9UQV4 416 aa11.83□□□□□ -0.51
TMEM260-201ENST00000261556 DCDC2BA2VCK2 349 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 PGA3P0DJD8 388 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 SRMP19623 302 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 S100GP29377 79 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 FRKP42685 505 aaPredicted RBP11.83□□□□□ -0.52
TMEM260-201ENST00000261556 RABIFP47224 123 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 CXCL12P48061 93 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 CSNK1DP48730 415 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 STARD6P59095 220 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 RPL19P84098 196 aaKnown RBP11.83□□□□□ -0.52
TMEM260-201ENST00000261556 ANKRD39Q53RE8 183 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 MEPCEQ7L2J0 689 aaKnown RBP11.83□□□□□ -0.52
TMEM260-201ENST00000261556 SLC38A5Q8WUX1 472 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 SERINC2Q96SA4 455 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 STRADBQ9C0K7 418 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 MYOTQ9UBF9 498 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 CACNA1SQ13698 1873 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 CCDC163A0A0D9SF12 145 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 LINC01553A4QN01 128 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 A6NIZ1 184 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 PEX11BO96011 259 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 PI3P19957 117 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 SHC2P98077 582 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 DHRS2Q13268 280 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 KIAA0040Q15053 153 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 NSDHLQ15738 373 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 HENMT1Q5T8I9 393 aaKnown RBP11.83□□□□□ -0.52
TMEM260-201ENST00000261556 SIRT6Q8N6T7 355 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 ASB17Q8WXJ9 295 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 MENTQ9BUN1 341 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 FGF20Q9NP95 211 aaPredicted RBP11.83□□□□□ -0.52
TMEM260-201ENST00000261556 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.83□□□□□ -0.52
TMEM260-201ENST00000261556 TOGARAM1Q9Y4F4 1720 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 EP300Q09472 2414 aaPredicted RBP11.83□□□□□ -0.52
TMEM260-201ENST00000261556 MFNGO00587 321 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 HYAL3O43820 417 aaPredicted RBP11.83□□□□□ -0.52
TMEM260-201ENST00000261556 GALNSP34059 522 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 P2RY2P41231 377 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 RPS15AP62244 130 aaKnown RBP11.83□□□□□ -0.52
TMEM260-201ENST00000261556 RAB11AP62491 216 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 CTSL3PQ5NE16 218 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 JMJD6Q6NYC1 403 aaPredicted RBP11.83□□□□□ -0.52
TMEM260-201ENST00000261556 COX15Q7KZN9 410 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 LRRC25Q8N386 305 aaPredicted RBP11.83□□□□□ -0.52
TMEM260-201ENST00000261556 OR52E2Q8NGJ4 325 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 OR8U1Q8NH10 309 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 SLC6A18Q96N87 628 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 NEU1Q99519 415 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 HIPK2Q9H2X6 1198 aa11.83□□□□□ -0.52
TMEM260-201ENST00000261556 PTPRFP10586 1907 aa11.82□□□□□ -0.52
TMEM260-201ENST00000261556 ZNF724A8MTY0 619 aa11.82□□□□□ -0.52
TMEM260-201ENST00000261556 TAPBPO15533 448 aa11.82□□□□□ -0.52
TMEM260-201ENST00000261556 EMC8O43402 210 aa11.82□□□□□ -0.52
TMEM260-201ENST00000261556 APBB3O95704 486 aa11.82□□□□□ -0.52
TMEM260-201ENST00000261556 F11P03951 625 aa11.82□□□□□ -0.52
TMEM260-201ENST00000261556 PGA4P0DJD7 388 aa11.82□□□□□ -0.52
TMEM260-201ENST00000261556 PGA5P0DJD9 388 aa11.82□□□□□ -0.52
TMEM260-201ENST00000261556 OR8G3PP0DMU2 310 aa11.82□□□□□ -0.52
TMEM260-201ENST00000261556 CD1CP29017 333 aa11.82□□□□□ -0.52
TMEM260-201ENST00000261556 C12orf73Q69YU5 71 aa11.82□□□□□ -0.52
TMEM260-201ENST00000261556 SBSNQ6UWP8 590 aa11.82□□□□□ -0.52
TMEM260-201ENST00000261556 TMEM123Q8N131 208 aa11.82□□□□□ -0.52
TMEM260-201ENST00000261556 OR4C15Q8NGM1 316 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms