RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 COX18Q8N8Q8 333 aa6.52□□□□□ -1.37
CSDE1-201ENST00000261443 LINC01555Q8NAE3 123 aa6.52□□□□□ -1.37
CSDE1-201ENST00000261443 ACBD4Q8NC06 268 aa6.52□□□□□ -1.37
CSDE1-201ENST00000261443 FAM174AQ8TBP5 190 aa6.52□□□□□ -1.37
CSDE1-201ENST00000261443 ST7LQ8TDW4 575 aa6.52□□□□□ -1.37
CSDE1-201ENST00000261443 CA5BP1Q8WTZ4 195 aa6.52□□□□□ -1.37
CSDE1-201ENST00000261443 CYB5D2Q8WUJ1 264 aa6.52□□□□□ -1.37
CSDE1-201ENST00000261443 TGM7Q96PF1 710 aa6.52□□□□□ -1.37
CSDE1-201ENST00000261443 NEU1Q99519 415 aa6.52□□□□□ -1.37
CSDE1-201ENST00000261443 S100A13Q99584 98 aa6.52□□□□□ -1.37
CSDE1-201ENST00000261443 C2orf88Q9BSF0 95 aa6.52□□□□□ -1.37
CSDE1-201ENST00000261443 PARP12Q9H0J9 701 aaKnown RBP6.52□□□□□ -1.37
CSDE1-201ENST00000261443 PPP1R14DQ9NXH3 145 aa6.52□□□□□ -1.37
CSDE1-201ENST00000261443 GDF2Q9UK05 429 aaPredicted RBP6.52□□□□□ -1.37
CSDE1-201ENST00000261443 GPR34Q9UPC5 381 aa6.52□□□□□ -1.37
CSDE1-201ENST00000261443 OBSL1O75147 1896 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 SCN2AQ99250 2005 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 C4orf47A7E2U8 309 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 LEFTY2O00292 366 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 ABHD16AO95870 558 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 F10P00742 488 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 CSTBP04080 98 aaKnown RBP6.51□□□□□ -1.37
CSDE1-201ENST00000261443 IFNA6P05013 189 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 HTR2CP28335 458 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 MAP3K8P41279 467 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 RAP1AP62834 184 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 RNF4P78317 190 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 BTN3A2P78410 334 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 GUK1Q16774 197 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 MOGAT2Q3SYC2 334 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 LBHQ53QV2 105 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-201ENST00000261443 HEPN1Q6WQI6 88 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 HIST2H3AQ71DI3 136 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 FAM219AQ8IW50 185 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 CRIPAKQ8N1N5 446 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 NKD1Q969G9 470 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 NUS1Q96E22 293 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 KXD1Q9BQD3 176 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 MKKSQ9NPJ1 570 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-201ENST00000261443 FBXL21Q9UKT6 434 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 AMDHD2Q9Y303 409 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 SEC14L6B5MCN3 397 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 DOK2O60496 412 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 ADAP1O75689 374 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 RPS27P42677 84 aaKnown RBP6.51□□□□□ -1.37
CSDE1-201ENST00000261443 CDKN2AP42771 156 aaKnown RBP6.51□□□□□ -1.37
CSDE1-201ENST00000261443 LSM6P62312 80 aaKnown RBP6.51□□□□□ -1.37
CSDE1-201ENST00000261443 RASGEF1BQ0VAM2 473 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 BIKQ13323 160 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 CCINQ13939 588 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 TRMT12Q53H54 448 aaKnown RBP6.51□□□□□ -1.37
CSDE1-201ENST00000261443 ZNF574Q6ZN55 896 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-201ENST00000261443 MTSS1LQ765P7 747 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 DPPA2Q7Z7J5 298 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 TRAPPC6BQ86SZ2 158 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 GKN2Q86XP6 184 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 TMEM25Q86YD3 366 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 PRSS35Q8N3Z0 413 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 GVQW1Q8N7I0 195 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 OR6N2Q8NGY6 317 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 TCTN2Q96GX1 697 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 INSM2Q96T92 566 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-201ENST00000261443 CMKLR1Q99788 373 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 MENTQ9BUN1 341 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 SUCNR1Q9BXA5 334 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 SRA1Q9HD15 236 aaKnown RBP6.51□□□□□ -1.37
CSDE1-201ENST00000261443 ZDHHC8Q9ULC8 765 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 GTF2A1LQ9UNN4 478 aa6.51□□□□□ -1.37
CSDE1-201ENST00000261443 TAAR5O14804 337 aa6.5□□□□□ -1.37
CSDE1-201ENST00000261443 BCAT2O15382 392 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-201ENST00000261443 LDB3O75112 727 aa6.5□□□□□ -1.37
CSDE1-201ENST00000261443 GPANK1O95872 356 aa6.5□□□□□ -1.37
CSDE1-201ENST00000261443 ADH1CP00326 375 aa6.5□□□□□ -1.37
CSDE1-201ENST00000261443 SLC2A1P11166 492 aa6.5□□□□□ -1.37
CSDE1-201ENST00000261443 HRH1P35367 487 aa6.5□□□□□ -1.37
CSDE1-201ENST00000261443 SNCAP37840 140 aa6.5□□□□□ -1.37
CSDE1-201ENST00000261443 RAB1AP62820 205 aa6.5□□□□□ -1.37
CSDE1-201ENST00000261443 NTHL1P78549 312 aa6.5□□□□□ -1.37
CSDE1-201ENST00000261443 PLAURQ03405 335 aa6.5□□□□□ -1.37
CSDE1-201ENST00000261443 C14orf28Q4W4Y0 310 aa6.5□□□□□ -1.37
CSDE1-201ENST00000261443 MIDNQ504T8 468 aa6.5□□□□□ -1.37
CSDE1-201ENST00000261443 PDZD11Q5EBL8 140 aa6.5□□□□□ -1.37
CSDE1-201ENST00000261443 CYB5R2Q6BCY4 276 aa6.5□□□□□ -1.37
CSDE1-201ENST00000261443 FAM166AQ6J272 317 aa6.5□□□□□ -1.37
CSDE1-201ENST00000261443 ZNF529Q6P280 563 aa6.5□□□□□ -1.37
CSDE1-201ENST00000261443 PARS2Q7L3T8 475 aaKnown RBP6.5□□□□□ -1.37
CSDE1-201ENST00000261443 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.5□□□□□ -1.37
CSDE1-201ENST00000261443 FJX1Q86VR8 437 aa6.5□□□□□ -1.37
CSDE1-201ENST00000261443 RAB42Q8N4Z0 105 aa6.5□□□□□ -1.37
CSDE1-201ENST00000261443 C19orf47Q8N9M1 422 aaKnown RBP6.5□□□□□ -1.37
CSDE1-201ENST00000261443 OR51F2Q8NH61 342 aa6.5□□□□□ -1.37
CSDE1-201ENST00000261443 MARCH1Q8TCQ1 289 aa6.5□□□□□ -1.37
CSDE1-201ENST00000261443 RNF128Q8TEB7 428 aa6.5□□□□□ -1.37
CSDE1-201ENST00000261443 ZNF775Q96BV0 537 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-201ENST00000261443 ZNF587Q96SQ5 575 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-201ENST00000261443 PDE7BQ9NP56 450 aa6.5□□□□□ -1.37
CSDE1-201ENST00000261443 STARD10Q9Y365 291 aa6.5□□□□□ -1.37
CSDE1-201ENST00000261443 ARPC3O15145 178 aa6.5□□□□□ -1.37
CSDE1-201ENST00000261443 ABLIM3O94929 683 aa6.5□□□□□ -1.37
CSDE1-201ENST00000261443 CST4P01036 141 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms