RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 ZNF519Q8TB69 540 aa14.63□□□□□ -0.07
SDCBP-201ENST00000260130 GPX7Q96SL4 187 aaPredicted RBP14.63□□□□□ -0.07
SDCBP-201ENST00000260130 ALG12Q9BV10 488 aa14.63□□□□□ -0.07
SDCBP-201ENST00000260130 SIAEQ9HAT2 523 aa14.63□□□□□ -0.07
SDCBP-201ENST00000260130 NRIP3Q9NQ35 241 aa14.63□□□□□ -0.07
SDCBP-201ENST00000260130 PRR14LQ5THK1 2151 aa14.63□□□□□ -0.07
SDCBP-201ENST00000260130 PDZD2O15018 2839 aa14.63□□□□□ -0.07
SDCBP-201ENST00000260130 MAST4O15021 2626 aa14.63□□□□□ -0.07
SDCBP-201ENST00000260130 POLQO75417 2590 aa14.63□□□□□ -0.07
SDCBP-201ENST00000260130 SSX1Q16384 188 aa14.63□□□□□ -0.07
SDCBP-201ENST00000260130 TMEM108Q6UXF1 575 aa14.63□□□□□ -0.07
SDCBP-201ENST00000260130 DPY19L2P2Q6ZN68 376 aa14.63□□□□□ -0.07
SDCBP-201ENST00000260130 GDPD3Q7L5L3 318 aa14.63□□□□□ -0.07
SDCBP-201ENST00000260130 FAM122BQ7Z309 247 aa14.63□□□□□ -0.07
SDCBP-201ENST00000260130 CCDC36Q8IYA8 594 aa14.63□□□□□ -0.07
SDCBP-201ENST00000260130 FANK1Q8TC84 345 aa14.63□□□□□ -0.07
SDCBP-201ENST00000260130 Q96M85 177 aa14.63□□□□□ -0.07
SDCBP-201ENST00000260130 RBP7Q96R05 134 aa14.63□□□□□ -0.07
SDCBP-201ENST00000260130 LIME1Q9H400 295 aa14.63□□□□□ -0.07
SDCBP-201ENST00000260130 POU2F3Q9UKI9 436 aa14.63□□□□□ -0.07
SDCBP-201ENST00000260130 M0R1B8 84 aa14.62□□□□□ -0.07
SDCBP-201ENST00000260130 ENTPD6O75354 484 aa14.62□□□□□ -0.07
SDCBP-201ENST00000260130 PLAUP00749 431 aa14.62□□□□□ -0.07
SDCBP-201ENST00000260130 NR2C1P13056 603 aa14.62□□□□□ -0.07
SDCBP-201ENST00000260130 PTAFRP25105 342 aa14.62□□□□□ -0.07
SDCBP-201ENST00000260130 ZNF133P52736 654 aaPredicted RBP14.62□□□□□ -0.07
SDCBP-201ENST00000260130 CARTPTQ16568 116 aa14.62□□□□□ -0.07
SDCBP-201ENST00000260130 SLX4IPQ5VYV7 408 aa14.62□□□□□ -0.07
SDCBP-201ENST00000260130 ZNF704Q6ZNC4 412 aaPredicted RBP14.62□□□□□ -0.07
SDCBP-201ENST00000260130 SETD6Q8TBK2 473 aa14.62□□□□□ -0.07
SDCBP-201ENST00000260130 TMEM80Q96HE8 168 aa14.62□□□□□ -0.07
SDCBP-201ENST00000260130 OPALINQ96PE5 141 aa14.62□□□□□ -0.07
SDCBP-201ENST00000260130 KCNS3Q9BQ31 491 aa14.62□□□□□ -0.07
SDCBP-201ENST00000260130 MND1Q9BWT6 205 aa14.62□□□□□ -0.07
SDCBP-201ENST00000260130 OR52D1Q9H346 318 aa14.62□□□□□ -0.07
SDCBP-201ENST00000260130 SMURF1Q9HCE7 757 aa14.62□□□□□ -0.07
SDCBP-201ENST00000260130 CAB39Q9Y376 341 aaPredicted RBP14.62□□□□□ -0.07
SDCBP-201ENST00000260130 RNF115Q9Y4L5 304 aa14.62□□□□□ -0.07
SDCBP-201ENST00000260130 ARHGEF9O43307 516 aa14.61□□□□□ -0.07
SDCBP-201ENST00000260130 GPX5O75715 221 aa14.61□□□□□ -0.07
SDCBP-201ENST00000260130 B4GALT1P15291 398 aa14.61□□□□□ -0.07
SDCBP-201ENST00000260130 NDUFA5Q16718 116 aa14.61□□□□□ -0.07
SDCBP-201ENST00000260130 THEM4Q5T1C6 240 aa14.61□□□□□ -0.07
SDCBP-201ENST00000260130 GPR139Q6DWJ6 353 aa14.61□□□□□ -0.07
SDCBP-201ENST00000260130 EXOSC4Q9NPD3 245 aaKnown RBP14.61□□□□□ -0.07
SDCBP-201ENST00000260130 REV1Q9UBZ9 1251 aa14.61□□□□□ -0.07
SDCBP-201ENST00000260130 EDARQ9UNE0 448 aa14.61□□□□□ -0.07
SDCBP-201ENST00000260130 RPL36Q9Y3U8 105 aaKnown RBP14.61□□□□□ -0.07
SDCBP-201ENST00000260130 NAV2Q8IVL1 2488 aa14.61□□□□□ -0.07
SDCBP-201ENST00000260130 XKRYO14609 159 aa14.61□□□□□ -0.07
SDCBP-201ENST00000260130 ADRA2AP08913 450 aa14.61□□□□□ -0.07
SDCBP-201ENST00000260130 PSMA1P25786 263 aaKnown RBP14.61□□□□□ -0.07
SDCBP-201ENST00000260130 CD40P25942 277 aa14.61□□□□□ -0.07
SDCBP-201ENST00000260130 SDHAP31040 664 aa14.61□□□□□ -0.07
SDCBP-201ENST00000260130 CAPZA2P47755 286 aa14.61□□□□□ -0.07
SDCBP-201ENST00000260130 ZNF84P51523 738 aa14.61□□□□□ -0.07
SDCBP-201ENST00000260130 C10orf128Q5T292 105 aa14.61□□□□□ -0.07
SDCBP-201ENST00000260130 RNLSQ5VYX0 342 aa14.61□□□□□ -0.07
SDCBP-201ENST00000260130 CDH24Q86UP0 819 aa14.61□□□□□ -0.07
SDCBP-201ENST00000260130 CLDN22Q8N7P3 220 aa14.61□□□□□ -0.07
SDCBP-201ENST00000260130 OR9Q1Q8NGQ5 310 aa14.61□□□□□ -0.07
SDCBP-201ENST00000260130 IL4I1Q96RQ9 567 aa14.61□□□□□ -0.07
SDCBP-201ENST00000260130 TMEM38BQ9NVV0 291 aa14.61□□□□□ -0.07
SDCBP-201ENST00000260130 LSM2Q9Y333 95 aaKnown RBP14.61□□□□□ -0.07
SDCBP-201ENST00000260130 IER3IP1Q9Y5U9 82 aa14.61□□□□□ -0.07
SDCBP-201ENST00000260130 SPG11Q96JI7 2443 aa14.61□□□□□ -0.07
SDCBP-201ENST00000260130 CTDSP2O14595 271 aa14.6□□□□□ -0.07
SDCBP-201ENST00000260130 ABCD4O14678 606 aa14.6□□□□□ -0.07
SDCBP-201ENST00000260130 SLC2A10O95528 541 aa14.6□□□□□ -0.07
SDCBP-201ENST00000260130 SLC6A6P31641 620 aa14.6□□□□□ -0.07
SDCBP-201ENST00000260130 TNFSF8P32971 234 aa14.6□□□□□ -0.07
SDCBP-201ENST00000260130 RORCP51449 518 aa14.6□□□□□ -0.07
SDCBP-201ENST00000260130 FMODQ06828 376 aa14.6□□□□□ -0.07
SDCBP-201ENST00000260130 SPHARQ15513 63 aa14.6□□□□□ -0.07
SDCBP-201ENST00000260130 MESTQ5EB52 335 aa14.6□□□□□ -0.07
SDCBP-201ENST00000260130 AGAP6Q5VW22 663 aa14.6□□□□□ -0.07
SDCBP-201ENST00000260130 C12orf73Q69YU5 71 aa14.6□□□□□ -0.07
SDCBP-201ENST00000260130 ZNF620Q6ZNG0 422 aa14.6□□□□□ -0.07
SDCBP-201ENST00000260130 IL17RDQ8NFM7 739 aa14.6□□□□□ -0.07
SDCBP-201ENST00000260130 OR8J1Q8NGP2 316 aa14.6□□□□□ -0.07
SDCBP-201ENST00000260130 SAMD8Q96LT4 415 aa14.6□□□□□ -0.07
SDCBP-201ENST00000260130 SDHCQ99643 169 aaPredicted RBP14.6□□□□□ -0.07
SDCBP-201ENST00000260130 IGKV1D-43A0A0B4J1Z2 117 aa14.6□□□□□ -0.07
SDCBP-201ENST00000260130 TEX13CA0A0J9YWL9 993 aa14.6□□□□□ -0.07
SDCBP-201ENST00000260130 APEHP13798 732 aaKnown RBP14.6□□□□□ -0.07
SDCBP-201ENST00000260130 ZNF544Q6NX49 715 aa14.6□□□□□ -0.07
SDCBP-201ENST00000260130 SLC25A47Q6Q0C1 308 aa14.6□□□□□ -0.07
SDCBP-201ENST00000260130 OR8H2Q8N162 312 aa14.6□□□□□ -0.07
SDCBP-201ENST00000260130 SLC22A24Q8N4F4 322 aa14.6□□□□□ -0.07
SDCBP-201ENST00000260130 FAM169BQ8N8A8 192 aa14.6□□□□□ -0.07
SDCBP-201ENST00000260130 RASD2Q96D21 266 aa14.6□□□□□ -0.07
SDCBP-201ENST00000260130 RADILQ96JH8 1075 aa14.6□□□□□ -0.07
SDCBP-201ENST00000260130 UBTD1Q9HAC8 227 aa14.6□□□□□ -0.07
SDCBP-201ENST00000260130 B3GNT2Q9NY97 397 aa14.6□□□□□ -0.07
SDCBP-201ENST00000260130 ST6GALNAC2Q9UJ37 374 aa14.6□□□□□ -0.07
SDCBP-201ENST00000260130 STUB1Q9UNE7 303 aa14.6□□□□□ -0.07
SDCBP-201ENST00000260130 GRIP1Q9Y3R0 1128 aa14.6□□□□□ -0.07
SDCBP-201ENST00000260130 ZNF503-AS2A6NEH8 195 aa14.59□□□□□ -0.07
SDCBP-201ENST00000260130 H3BN98 237 aa14.59□□□□□ -0.07
SDCBP-201ENST00000260130 CCNKO75909 580 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms