RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 DAPL1A0PJW8 107 aa13.76□□□□□ -0.21
CCDC90B-201ENST00000260054 ZNF670-ZNF695F2Z2N8 137 aa13.76□□□□□ -0.21
CCDC90B-201ENST00000260054 MAGEB4O15481 346 aaPredicted RBP13.76□□□□□ -0.21
CCDC90B-201ENST00000260054 SGCEO43556 437 aa13.76□□□□□ -0.21
CCDC90B-201ENST00000260054 THBDP07204 575 aa13.76□□□□□ -0.21
CCDC90B-201ENST00000260054 HTR1AP08908 422 aa13.76□□□□□ -0.21
CCDC90B-201ENST00000260054 ARR3P36575 388 aa13.76□□□□□ -0.21
CCDC90B-201ENST00000260054 PPA1Q15181 289 aa13.76□□□□□ -0.21
CCDC90B-201ENST00000260054 SEZ6L2Q6UXD5 910 aa13.76□□□□□ -0.21
CCDC90B-201ENST00000260054 SPATC1Q76KD6 591 aa13.76□□□□□ -0.21
CCDC90B-201ENST00000260054 VASH1Q7L8A9 365 aaPredicted RBP13.76□□□□□ -0.21
CCDC90B-201ENST00000260054 LHFPL3Q86UP9 236 aa13.76□□□□□ -0.21
CCDC90B-201ENST00000260054 CPEB3Q8NE35 698 aaKnown RBP13.76□□□□□ -0.21
CCDC90B-201ENST00000260054 SSC4DQ8WTU2 575 aa13.76□□□□□ -0.21
CCDC90B-201ENST00000260054 HSD17B8Q92506 261 aa13.76□□□□□ -0.21
CCDC90B-201ENST00000260054 MYDGFQ969H8 173 aa13.76□□□□□ -0.21
CCDC90B-201ENST00000260054 SLAMF6Q96DU3 332 aa13.76□□□□□ -0.21
CCDC90B-201ENST00000260054 WFIKKN1Q96NZ8 548 aa13.76□□□□□ -0.21
CCDC90B-201ENST00000260054 ERVK13-1Q9NX77 482 aa13.76□□□□□ -0.21
CCDC90B-201ENST00000260054 C19orf84I3L1E1 186 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 PSMD9O00233 223 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 DOK2O60496 412 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 LIMS3P0CW19 117 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 LIMS4P0CW20 117 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 EEF1B2P24534 225 aaKnown RBP13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 ETV1P50549 477 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 GABARAPL2P60520 117 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 RAB39AQ14964 217 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 KCTD21Q4G0X4 260 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 ELFN2Q5R3F8 820 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 ALKBH2Q6NS38 261 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 TMEM53Q6P2H8 277 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 ZNF322Q6U7Q0 402 aaPredicted RBP13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 MYPOPQ86VE0 399 aaPredicted RBP13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 ZNF584Q8IVC4 421 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 LINC01560Q8TB33 94 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 RNF133Q8WVZ7 376 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 MUCL1Q96DR8 90 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 ZC3HAV1LQ96H79 300 aaKnown RBP13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 MS4A3Q96HJ5 214 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 CLEC2DQ9UHP7 191 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 COL12A1Q99715 3063 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 TRIM64A6NGJ6 449 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 PHYHO14832 338 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 RGS10O43665 173 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 SYNGR3O43761 229 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 TNFAIP8O95379 198 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 IGKV3-15P01624 115 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 MT-ND2P03891 347 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 CELA3BP08861 270 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 CBR1P16152 277 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 PPP3CBP16298 524 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 CDH15P55291 814 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 GALEQ14376 348 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 RAB35Q15286 201 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 LRRN1Q6UXK5 716 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 ASB17Q8WXJ9 295 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 OR8B4Q96RC9 309 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 MED18Q9BUE0 208 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 INPP5EQ9NRR6 644 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 CENPMQ9NSP4 180 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 SLCO1C1Q9NYB5 712 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 NPAP1Q9NZP6 1156 aa13.75□□□□□ -0.21
CCDC90B-201ENST00000260054 RTTNQ86VV8 2226 aa13.74□□□□□ -0.21
CCDC90B-201ENST00000260054 OR6C6A6NF89 314 aa13.74□□□□□ -0.21
CCDC90B-201ENST00000260054 ZNF878C9JN71 531 aa13.74□□□□□ -0.21
CCDC90B-201ENST00000260054 ZNF14P17017 642 aaPredicted RBP13.74□□□□□ -0.21
CCDC90B-201ENST00000260054 OPRL1P41146 370 aa13.74□□□□□ -0.21
CCDC90B-201ENST00000260054 IDH3GP51553 393 aaPredicted RBP13.74□□□□□ -0.21
CCDC90B-201ENST00000260054 ROM1Q03395 351 aa13.74□□□□□ -0.21
CCDC90B-201ENST00000260054 ZNF684Q5T5D7 378 aa13.74□□□□□ -0.21
CCDC90B-201ENST00000260054 C1QTNF12Q5T7M4 302 aa13.74□□□□□ -0.21
CCDC90B-201ENST00000260054 SLC7A6Q92536 515 aa13.74□□□□□ -0.21
CCDC90B-201ENST00000260054 ATF6BQ99941 703 aa13.74□□□□□ -0.21
CCDC90B-201ENST00000260054 ALG8Q9BVK2 526 aa13.74□□□□□ -0.21
CCDC90B-201ENST00000260054 CDCA4Q9BXL8 241 aa13.74□□□□□ -0.21
CCDC90B-201ENST00000260054 CCDC90BQ9GZT6 254 aa13.74□□□□□ -0.21
CCDC90B-201ENST00000260054 HDHD2Q9H0R4 259 aa13.74□□□□□ -0.21
CCDC90B-201ENST00000260054 DDX28Q9NUL7 540 aaKnown RBP13.74□□□□□ -0.21
CCDC90B-201ENST00000260054 CRNNQ9UBG3 495 aaPredicted RBP13.74□□□□□ -0.21
CCDC90B-201ENST00000260054 MRM2Q9UI43 246 aaKnown RBP13.74□□□□□ -0.21
CCDC90B-201ENST00000260054 EXOSC1Q9Y3B2 195 aaKnown RBP13.74□□□□□ -0.21
CCDC90B-201ENST00000260054 LRRK2Q5S007 2527 aa13.73□□□□□ -0.21
CCDC90B-201ENST00000260054 TUBAL3A6NHL2 446 aa13.73□□□□□ -0.21
CCDC90B-201ENST00000260054 IGLV1-44P01699 117 aa13.73□□□□□ -0.21
CCDC90B-201ENST00000260054 SERPINA5P05154 406 aa13.73□□□□□ -0.21
CCDC90B-201ENST00000260054 MYL12AP19105 171 aa13.73□□□□□ -0.21
CCDC90B-201ENST00000260054 APEX1P27695 318 aaKnown RBP13.73□□□□□ -0.21
CCDC90B-201ENST00000260054 ZNF83P51522 516 aa13.73□□□□□ -0.21
CCDC90B-201ENST00000260054 PLP2Q04941 152 aa13.73□□□□□ -0.21
CCDC90B-201ENST00000260054 EGR3Q06889 387 aa13.73□□□□□ -0.21
CCDC90B-201ENST00000260054 RSPO1Q2MKA7 263 aaPredicted RBP13.73□□□□□ -0.21
CCDC90B-201ENST00000260054 CDONQ4KMG0 1287 aa13.73□□□□□ -0.21
CCDC90B-201ENST00000260054 OR2G6Q5TZ20 316 aa13.73□□□□□ -0.21
CCDC90B-201ENST00000260054 KCTD18Q6PI47 426 aaPredicted RBP13.73□□□□□ -0.21
CCDC90B-201ENST00000260054 RHOUQ7L0Q8 258 aa13.73□□□□□ -0.21
CCDC90B-201ENST00000260054 PRSS48Q7RTY5 328 aa13.73□□□□□ -0.21
CCDC90B-201ENST00000260054 KRT77Q7Z794 578 aa13.73□□□□□ -0.21
CCDC90B-201ENST00000260054 WFDC8Q8IUA0 241 aa13.73□□□□□ -0.21
CCDC90B-201ENST00000260054 ZNF679Q8IYX0 411 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms