RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 HTRA1Q92743 480 aa15.39■□□□□ 0.05
SRSF1-201ENST00000258962 MAP6Q96JE9 813 aa15.39■□□□□ 0.05
SRSF1-201ENST00000258962 PPIL3Q9H2H8 161 aaKnown RBP15.39■□□□□ 0.05
SRSF1-201ENST00000258962 KCNN2Q9H2S1 579 aa15.39■□□□□ 0.05
SRSF1-201ENST00000258962 TP63Q9H3D4 680 aaPredicted RBP15.39■□□□□ 0.05
SRSF1-201ENST00000258962 ELOVL3Q9HB03 270 aa15.39■□□□□ 0.05
SRSF1-201ENST00000258962 EMC7Q9NPA0 242 aa15.39■□□□□ 0.05
SRSF1-201ENST00000258962 SNTG1Q9NSN8 517 aa15.39■□□□□ 0.05
SRSF1-201ENST00000258962 MEMO1Q9Y316 297 aa15.39■□□□□ 0.05
SRSF1-201ENST00000258962 A0A075B6Q4 140 aa15.38■□□□□ 0.05
SRSF1-201ENST00000258962 IGKV3D-15A0A087WSY6 115 aa15.38■□□□□ 0.05
SRSF1-201ENST00000258962 WIPF3A6NGB9 483 aa15.38■□□□□ 0.05
SRSF1-201ENST00000258962 E9PLN8 166 aa15.38■□□□□ 0.05
SRSF1-201ENST00000258962 ZG16O60844 167 aa15.38■□□□□ 0.05
SRSF1-201ENST00000258962 OPRL1P41146 370 aa15.38■□□□□ 0.05
SRSF1-201ENST00000258962 MXD1Q05195 221 aa15.38■□□□□ 0.05
SRSF1-201ENST00000258962 ALKBH1Q13686 389 aaKnown RBP15.38■□□□□ 0.05
SRSF1-201ENST00000258962 ZNF585AQ6P3V2 769 aa15.38■□□□□ 0.05
SRSF1-201ENST00000258962 C16orf87Q6PH81 154 aa15.38■□□□□ 0.05
SRSF1-201ENST00000258962 KCTD18Q6PI47 426 aaPredicted RBP15.38■□□□□ 0.05
SRSF1-201ENST00000258962 CORO6Q6QEF8 472 aa15.38■□□□□ 0.05
SRSF1-201ENST00000258962 MS4A15Q8N5U1 240 aa15.38■□□□□ 0.05
SRSF1-201ENST00000258962 RGP1Q92546 391 aaPredicted RBP15.38■□□□□ 0.05
SRSF1-201ENST00000258962 INTS12Q96CB8 462 aaKnown RBP15.38■□□□□ 0.05
SRSF1-201ENST00000258962 VKORC1Q9BQB6 163 aa15.38■□□□□ 0.05
SRSF1-201ENST00000258962 SEC61A2Q9H9S3 476 aa15.38■□□□□ 0.05
SRSF1-201ENST00000258962 POLE4Q9NR33 117 aa15.38■□□□□ 0.05
SRSF1-201ENST00000258962 FRRS1LQ9P0K9 344 aa15.38■□□□□ 0.05
SRSF1-201ENST00000258962 CYB5R1Q9UHQ9 305 aa15.38■□□□□ 0.05
SRSF1-201ENST00000258962 LRP12Q9Y561 859 aa15.38■□□□□ 0.05
SRSF1-201ENST00000258962 LHFPL6Q9Y693 200 aa15.38■□□□□ 0.05
SRSF1-201ENST00000258962 FIGNL2A6NMB9 653 aa15.38■□□□□ 0.05
SRSF1-201ENST00000258962 GPRIN2O60269 458 aa15.38■□□□□ 0.05
SRSF1-201ENST00000258962 ZFPL1O95159 310 aa15.38■□□□□ 0.05
SRSF1-201ENST00000258962 FAM27D1Q5T7N8 215 aa15.38■□□□□ 0.05
SRSF1-201ENST00000258962 TMEM211Q6ICI0 200 aa15.38■□□□□ 0.05
SRSF1-201ENST00000258962 FDX2Q6P4F2 183 aa15.38■□□□□ 0.05
SRSF1-201ENST00000258962 AAED1Q7RTV5 226 aa15.38■□□□□ 0.05
SRSF1-201ENST00000258962 KRT77Q7Z794 578 aa15.38■□□□□ 0.05
SRSF1-201ENST00000258962 OR2G2Q8NGZ5 317 aa15.38■□□□□ 0.05
SRSF1-201ENST00000258962 SLC25A46Q96AG3 418 aa15.38■□□□□ 0.05
SRSF1-201ENST00000258962 WDYHV1Q96HA8 205 aa15.38■□□□□ 0.05
SRSF1-201ENST00000258962 CCDC120Q96HB5 630 aa15.38■□□□□ 0.05
SRSF1-201ENST00000258962 SH3GL3Q99963 347 aa15.38■□□□□ 0.05
SRSF1-201ENST00000258962 PAQR5Q9NXK6 330 aaPredicted RBP15.38■□□□□ 0.05
SRSF1-201ENST00000258962 SPTBN1Q01082 2364 aaKnown RBP15.37■□□□□ 0.05
SRSF1-201ENST00000258962 DHHO43323 396 aa15.37■□□□□ 0.05
SRSF1-201ENST00000258962 SLC43A1O75387 559 aa15.37■□□□□ 0.05
SRSF1-201ENST00000258962 SYNGR4O95473 234 aa15.37■□□□□ 0.05
SRSF1-201ENST00000258962 SERPINA3P01011 423 aa15.37■□□□□ 0.05
SRSF1-201ENST00000258962 CPN1P15169 458 aa15.37■□□□□ 0.05
SRSF1-201ENST00000258962 KIR3DL2P43630 455 aa15.37■□□□□ 0.05
SRSF1-201ENST00000258962 ACSM3Q53FZ2 586 aa15.37■□□□□ 0.05
SRSF1-201ENST00000258962 OR7E24Q6IFN5 339 aa15.37■□□□□ 0.05
SRSF1-201ENST00000258962 CEACAM19Q7Z692 300 aa15.37■□□□□ 0.05
SRSF1-201ENST00000258962 PRSS35Q8N3Z0 413 aa15.37■□□□□ 0.05
SRSF1-201ENST00000258962 OR10S1Q8NGN2 331 aa15.37■□□□□ 0.05
SRSF1-201ENST00000258962 FNDC9Q8TBE3 224 aa15.37■□□□□ 0.05
SRSF1-201ENST00000258962 AP3S1Q92572 193 aa15.37■□□□□ 0.05
SRSF1-201ENST00000258962 TMEM45BQ96B21 275 aa15.37■□□□□ 0.05
SRSF1-201ENST00000258962 C4orf45Q96LM5 186 aa15.37■□□□□ 0.05
SRSF1-201ENST00000258962 MROQ9BYG7 248 aa15.37■□□□□ 0.05
SRSF1-201ENST00000258962 ULBP2Q9BZM5 246 aa15.37■□□□□ 0.05
SRSF1-201ENST00000258962 TPK1Q9H3S4 243 aa15.37■□□□□ 0.05
SRSF1-201ENST00000258962 NCOA6Q14686 2063 aaPredicted RBP15.37■□□□□ 0.05
SRSF1-201ENST00000258962 PCNX1Q96RV3 2341 aa15.36■□□□□ 0.05
SRSF1-201ENST00000258962 SMIM30A4D0T7 59 aa15.36■□□□□ 0.05
SRSF1-201ENST00000258962 OR4C45A6NMZ5 311 aa15.36■□□□□ 0.05
SRSF1-201ENST00000258962 WDR1O75083 606 aa15.36■□□□□ 0.05
SRSF1-201ENST00000258962 SRSF10O75494 262 aaKnown RBP15.36■□□□□ 0.05
SRSF1-201ENST00000258962 PNPP00491 289 aa15.36■□□□□ 0.05
SRSF1-201ENST00000258962 HOXD4P09016 255 aaPredicted RBP15.36■□□□□ 0.05
SRSF1-201ENST00000258962 MFGE8Q08431 387 aaPredicted RBP15.36■□□□□ 0.05
SRSF1-201ENST00000258962 HNRNPA0Q13151 305 aaKnown RBP15.36■□□□□ 0.05
SRSF1-201ENST00000258962 ZMAT1Q5H9K5 638 aa15.36■□□□□ 0.05
SRSF1-201ENST00000258962 WDR38Q5JTN6 314 aa15.36■□□□□ 0.05
SRSF1-201ENST00000258962 PAMR1Q6UXH9 720 aa15.36■□□□□ 0.05
SRSF1-201ENST00000258962 CFAP77Q6ZQR2 320 aa15.36■□□□□ 0.05
SRSF1-201ENST00000258962 RNF133Q8WVZ7 376 aa15.36■□□□□ 0.05
SRSF1-201ENST00000258962 NABP1Q96AH0 204 aa15.36■□□□□ 0.05
SRSF1-201ENST00000258962 ZNF837Q96EG3 531 aaPredicted RBP15.36■□□□□ 0.05
SRSF1-201ENST00000258962 PSMG3-AS1Q96PY0 264 aa15.36■□□□□ 0.05
SRSF1-201ENST00000258962 C6orf62Q9GZU0 229 aaPredicted RBP15.36■□□□□ 0.05
SRSF1-201ENST00000258962 AKIP1Q9NQ31 210 aa15.36■□□□□ 0.05
SRSF1-201ENST00000258962 GDF2Q9UK05 429 aaPredicted RBP15.36■□□□□ 0.05
SRSF1-201ENST00000258962 FBXL3Q9UKT7 428 aa15.36■□□□□ 0.05
SRSF1-201ENST00000258962 MCTS1Q9ULC4 181 aaKnown RBP15.36■□□□□ 0.05
SRSF1-201ENST00000258962 ZNF281Q9Y2X9 895 aa15.36■□□□□ 0.05
SRSF1-201ENST00000258962 TMCC2O75069 709 aa15.35■□□□□ 0.05
SRSF1-201ENST00000258962 RNF224P0DH78 156 aa15.35■□□□□ 0.05
SRSF1-201ENST00000258962 GABRA1P14867 456 aa15.35■□□□□ 0.05
SRSF1-201ENST00000258962 CALRP27797 417 aaKnown RBP15.35■□□□□ 0.05
SRSF1-201ENST00000258962 MTNR1BP49286 362 aa15.35■□□□□ 0.05
SRSF1-201ENST00000258962 RIDAP52758 137 aaKnown RBP15.35■□□□□ 0.05
SRSF1-201ENST00000258962 ZNF45Q02386 682 aa15.35■□□□□ 0.05
SRSF1-201ENST00000258962 SF3B4Q15427 424 aaKnown RBP eCLIP15.35■□□□□ 0.054e-9■■■■■ 52.1
SRSF1-201ENST00000258962 UNQ9370/PRO34162Q6UXP9 181 aa15.35■□□□□ 0.05
SRSF1-201ENST00000258962 LINGO2Q7L985 606 aa15.35■□□□□ 0.05
SRSF1-201ENST00000258962 MRGPRGQ86SM5 289 aa15.35■□□□□ 0.05
SRSF1-201ENST00000258962 OR5AK2Q8NH90 309 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms