RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 CBR1P16152 277 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 PSMB6P28072 239 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 LIPAP38571 399 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 GPR12P47775 334 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 SRP9P49458 86 aaKnown RBP4.4□□□□□ -1.7
RC3H1-201ENST00000258349 CTSCP53634 463 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 UBE2G1P62253 170 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 HTRA4P83105 476 aaPredicted RBP4.4□□□□□ -1.7
RC3H1-201ENST00000258349 CDK5Q00535 292 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 ZNF534Q76KX8 674 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 C20orf24Q9BUV8 137 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 C1QTNF3Q9BXJ4 246 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 KIR3DX1Q9H7L2 352 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 CRLF2Q9HC73 371 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 KCNG2Q9UJ96 466 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 RNF24Q9Y225 148 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 HEMK1Q9Y5R4 338 aaPredicted RBP4.4□□□□□ -1.7
RC3H1-201ENST00000258349 A0A1B0GWA3 101 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 P2RY10O00398 339 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 ACOT8O14734 319 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 BCL2L11O43521 198 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 NME2P1O60361 137 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 GABRB1P18505 474 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 MAKP20794 623 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 ITGB8P26012 769 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 PSMB5P28074 263 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 ELLP55199 621 aaPredicted RBP4.4□□□□□ -1.7
RC3H1-201ENST00000258349 ENDOGQ14249 297 aaKnown RBP4.4□□□□□ -1.7
RC3H1-201ENST00000258349 IQCJQ1A5X6 159 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 COL13A1Q5TAT6 717 aaPredicted RBP4.4□□□□□ -1.7
RC3H1-201ENST00000258349 C1orf140Q5VVS0 124 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 DLEU7Q6UYE1 221 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 GTF2H5Q6ZYL4 71 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 DCXRQ7Z4W1 244 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 DND1Q8IYX4 353 aaKnown RBP4.4□□□□□ -1.7
RC3H1-201ENST00000258349 CLRN3Q8NCR9 226 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 FAM3CQ92520 227 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 CMTM3Q96MX0 182 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 HHIPQ96QV1 700 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 DYNLRB1Q9NP97 96 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 LYRM2Q9NU23 88 aaPredicted RBP4.4□□□□□ -1.7
RC3H1-201ENST00000258349 H7C1C5 153 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 SH2D1BO14796 132 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 TOX4O94842 621 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 ARR3P36575 388 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 SLC6A11P48066 632 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 MFAP5Q13361 173 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 TESK1Q15569 626 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 HAGHQ16775 308 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 HYAL4Q2M3T9 481 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 ARHGAP11BQ3KRB8 267 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 ZBTB37Q5TC79 503 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 DHRS4L2Q6PKH6 230 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 TBPL2Q6SJ96 375 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 PPP1R3BQ86XI6 285 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 ZNRF4Q8WWF5 429 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 YIPF6Q96EC8 236 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 EGLN1Q9GZT9 426 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 ZBTB42B2RXF5 422 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 NID1P14543 1247 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 ENPP1P22413 925 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 F2RP25116 425 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.4□□□□□ -1.7
RC3H1-201ENST00000258349 ZNF626Q68DY1 528 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 SLC48A1Q6P1K1 146 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 Q6ZRG5 221 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 ZNF561Q8N587 486 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 ANKRD53Q8N9V6 530 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 OR10X1Q8NGY0 326 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 ZFPM2Q8WW38 1151 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 OR2A14Q96R47 310 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 TNFRSF13CQ96RJ3 184 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 NIPSNAP1Q9BPW8 284 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 VPS25Q9BRG1 176 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 NUDT22Q9BRQ3 303 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 CABLES2Q9BTV7 478 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 BARHL1Q9BZE3 327 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 GSX2Q9BZM3 304 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 TAS2R4Q9NYW5 299 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 OR6C68A6NDL8 312 aa4.4□□□□□ -1.71
RC3H1-201ENST00000258349 H3BQ06 376 aaPredicted RBP4.4□□□□□ -1.71
RC3H1-201ENST00000258349 PFN3P60673 137 aa4.4□□□□□ -1.71
RC3H1-201ENST00000258349 PNLIPRP3Q17RR3 467 aa4.4□□□□□ -1.71
RC3H1-201ENST00000258349 PLPP6Q8IY26 295 aa4.4□□□□□ -1.71
RC3H1-201ENST00000258349 OR51A4Q8NGJ6 313 aa4.4□□□□□ -1.71
RC3H1-201ENST00000258349 OR13C9Q8NGT0 318 aa4.4□□□□□ -1.71
RC3H1-201ENST00000258349 TMEM18Q96B42 140 aa4.4□□□□□ -1.71
RC3H1-201ENST00000258349 SEC22AQ96IW7 307 aa4.4□□□□□ -1.71
RC3H1-201ENST00000258349 POMT1Q9Y6A1 747 aa4.4□□□□□ -1.71
RC3H1-201ENST00000258349 TRIOBPQ9H2D6 2365 aa4.4□□□□□ -1.71
RC3H1-201ENST00000258349 CDC14CA4D256 554 aa4.4□□□□□ -1.71
RC3H1-201ENST00000258349 PRAMEF25A6NGN4 478 aa4.4□□□□□ -1.71
RC3H1-201ENST00000258349 HEXAP06865 529 aa4.4□□□□□ -1.71
RC3H1-201ENST00000258349 CD38P28907 300 aa4.4□□□□□ -1.71
RC3H1-201ENST00000258349 RAB13P51153 203 aa4.4□□□□□ -1.71
RC3H1-201ENST00000258349 C1orf61Q13536 156 aa4.4□□□□□ -1.71
RC3H1-201ENST00000258349 CTU2Q2VPK5 515 aaKnown RBP4.4□□□□□ -1.71
RC3H1-201ENST00000258349 MOB1BQ7L9L4 216 aa4.4□□□□□ -1.71
RC3H1-201ENST00000258349 SUMF1Q8NBK3 374 aa4.4□□□□□ -1.71
RC3H1-201ENST00000258349 TMEM40Q8WWA1 233 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms