RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 RPS25P62851 125 aaKnown RBP6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 HERV-K104P63124 156 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 TMEM150AQ86TG1 271 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 ZFAND4Q86XD8 727 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 SLC5A8Q8N695 610 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 OR52M1Q8NGK5 317 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 FAM110BQ8TC76 370 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 C2orf15Q8WU43 125 aaKnown RBP6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 NINJ1Q92982 152 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 ARRDC3Q96B67 414 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 CDCA4Q9BXL8 241 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 RBM22Q9NW64 420 aaKnown RBP eCLIP6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 ZNF727A8MUV8 499 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 DIRC3C9JPN6 131 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 PLA2G10O15496 165 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 ABHD16AO95870 558 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 NR2F1P10589 423 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 ACVR1BP36896 505 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 RPL13AP40429 203 aaKnown RBP6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 SELENOPP49908 381 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 RABGGTBP53611 331 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 RPS14P62263 151 aaKnown RBP6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 RPL7AP62424 266 aaKnown RBP6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 DHODHQ02127 395 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 TGFBR3Q03167 851 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 ARFRP1Q13795 201 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 OR7A5Q15622 319 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 SLC10A6Q3KNW5 377 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 ZNF534Q76KX8 674 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 SYT13Q7L8C5 426 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 PTRH1Q86Y79 214 aaKnown RBP6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 CMTM1Q8IZ96 169 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 TEX29Q8N6K0 151 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 ZSCAN4Q8NAM6 433 aaPredicted RBP6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 OR6K2Q8NGY2 324 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 ZIC5Q96T25 663 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 BANF2Q9H503 90 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 CUTCQ9NTM9 273 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 TMEM140Q9NV12 185 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 NDUFB11Q9NX14 153 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 MARCH5Q9NX47 278 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 MARCH2Q9P0N8 246 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 MRPS28Q9Y2Q9 187 aaKnown RBP6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 A0A1B0GUL6 1792 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 MYH10P35580 1976 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 H7C1C5 153 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 SNAI1O95863 264 aaPredicted RBP6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 TNFAIP8L2Q6P589 184 aaPredicted RBP6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 ANKRD16Q6P6B7 361 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 ZNF761Q86XN6 746 aaPredicted RBP6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 OR4L1Q8NH43 312 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 CXorf40BQ96DE9 158 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 PIK3IP1Q96FE7 263 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 DEFB118Q96PH6 123 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 SYT3Q9BQG1 590 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 ULBP3Q9BZM4 244 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 SELENOIQ9C0D9 397 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 RAB18Q9NP72 206 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 DCAF13Q9NV06 445 aaKnown RBP6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 IGKV6D-21A0A0A0MT36 114 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 A0A1W2PRS3 328 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 C9J4A7 227 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 ALDOAP04075 364 aaKnown RBP6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 ATXN8OSP0DMR3 200 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 UNGP13051 313 aaPredicted RBP6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 CLDN8P56748 225 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 SRSF6Q13247 344 aaKnown RBP6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 PRICKLE4Q2TBC4 344 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 SFXN4Q6P4A7 337 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 BTNL8Q6UX41 500 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 DRAM2Q6UX65 266 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 LHFPL4Q7Z7J7 247 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 WDFY1Q8IWB7 410 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 OR4K15Q8NH41 348 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 APIPQ96GX9 242 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 NMNAT2Q9BZQ4 307 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 Q9N2K0 584 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 P4HTMQ9NXG6 502 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 CRLS1Q9UJA2 301 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 TRAV18A0A075B6X5 111 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 GABARAPH6UMI1 98 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 OSMP13725 252 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 FRKP42685 505 aaPredicted RBP6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 FOXL2P58012 376 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 ROM1Q03395 351 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 PLCXD2Q0VAA5 305 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 ZNF266Q14584 549 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 CHST9Q7L1S5 443 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 CELF5Q8N6W0 485 aaKnown RBP6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 OR9A4Q8NGU2 314 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 SFXN5Q8TD22 340 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 GPR152Q8TDT2 470 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 NAA11Q9BSU3 229 aaPredicted RBP6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 DOHHQ9BU89 302 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 ANGPTL4Q9BY76 406 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 RAB33BQ9H082 229 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 LPAR3Q9UBY5 353 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 CLN8Q9UBY8 286 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 CSO75390 466 aaKnown RBP6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 NUDT3O95989 172 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms