RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 ALDH3B1P43353 468 aa10.94□□□□□ -0.66
VPREB3-201ENST00000248948 RGS6P49758 472 aa10.94□□□□□ -0.66
VPREB3-201ENST00000248948 SLC25A1P53007 311 aa10.94□□□□□ -0.66
VPREB3-201ENST00000248948 PPP1CBP62140 327 aa10.94□□□□□ -0.66
VPREB3-201ENST00000248948 MRPS11P82912 194 aaKnown RBP10.94□□□□□ -0.66
VPREB3-201ENST00000248948 KRTAP1-1Q07627 177 aa10.94□□□□□ -0.66
VPREB3-201ENST00000248948 MAD2L1BPQ15013 274 aaPredicted RBP10.94□□□□□ -0.66
VPREB3-201ENST00000248948 PCGF3Q3KNV8 242 aa10.94□□□□□ -0.66
VPREB3-201ENST00000248948 ZNF718Q3SXZ3 478 aa10.94□□□□□ -0.66
VPREB3-201ENST00000248948 ZMAT1Q5H9K5 638 aa10.94□□□□□ -0.66
VPREB3-201ENST00000248948 SLC35F1Q5T1Q4 408 aa10.94□□□□□ -0.66
VPREB3-201ENST00000248948 SLC18B1Q6NT16 456 aa10.94□□□□□ -0.66
VPREB3-201ENST00000248948 SHQ1Q6PI26 577 aaKnown RBP10.94□□□□□ -0.66
VPREB3-201ENST00000248948 LRP11Q86VZ4 500 aa10.94□□□□□ -0.66
VPREB3-201ENST00000248948 SLC37A3Q8NCC5 494 aa10.94□□□□□ -0.66
VPREB3-201ENST00000248948 ICA1LQ8NDH6 482 aa10.94□□□□□ -0.66
VPREB3-201ENST00000248948 ZNF540Q8NDQ6 660 aa10.94□□□□□ -0.66
VPREB3-201ENST00000248948 PROKR2Q8NFJ6 384 aa10.94□□□□□ -0.66
VPREB3-201ENST00000248948 OR1F12Q8NHA8 337 aa10.94□□□□□ -0.66
VPREB3-201ENST00000248948 ABHD4Q8TB40 342 aa10.94□□□□□ -0.66
VPREB3-201ENST00000248948 SLCO4A1Q96BD0 722 aa10.94□□□□□ -0.66
VPREB3-201ENST00000248948 NRBF2Q96F24 287 aa10.94□□□□□ -0.66
VPREB3-201ENST00000248948 MARS2Q96GW9 593 aaKnown RBP10.94□□□□□ -0.66
VPREB3-201ENST00000248948 C4orf45Q96LM5 186 aa10.94□□□□□ -0.66
VPREB3-201ENST00000248948 RBM4Q9BWF3 364 aaKnown RBP10.94□□□□□ -0.66
VPREB3-201ENST00000248948 TPK1Q9H3S4 243 aa10.94□□□□□ -0.66
VPREB3-201ENST00000248948 ZNF556Q9HAH1 456 aa10.94□□□□□ -0.66
VPREB3-201ENST00000248948 CMC2Q9NRP2 79 aa10.94□□□□□ -0.66
VPREB3-201ENST00000248948 PDP1Q9P0J1 537 aaPredicted RBP10.94□□□□□ -0.66
VPREB3-201ENST00000248948 FZR1Q9UM11 496 aa10.94□□□□□ -0.66
VPREB3-201ENST00000248948 ABCA1O95477 2261 aa10.94□□□□□ -0.66
VPREB3-201ENST00000248948 NIPBLQ6KC79 2804 aaeCLIP10.94□□□□□ -0.66
VPREB3-201ENST00000248948 FN1P02751 2386 aaKnown RBP10.93□□□□□ -0.66
VPREB3-201ENST00000248948 RIIAD1A6NNX1 92 aa10.93□□□□□ -0.66
VPREB3-201ENST00000248948 C17orf100A8MU93 164 aa10.93□□□□□ -0.66
VPREB3-201ENST00000248948 H3BN98 237 aa10.93□□□□□ -0.66
VPREB3-201ENST00000248948 RER1O15258 196 aa10.93□□□□□ -0.66
VPREB3-201ENST00000248948 TFP02787 698 aa10.93□□□□□ -0.66
VPREB3-201ENST00000248948 ANXA8P13928 327 aa10.93□□□□□ -0.66
VPREB3-201ENST00000248948 GRK5P34947 590 aa10.93□□□□□ -0.66
VPREB3-201ENST00000248948 NR4A2P43354 598 aa10.93□□□□□ -0.66
VPREB3-201ENST00000248948 CENPAP49450 140 aa10.93□□□□□ -0.66
VPREB3-201ENST00000248948 BLVRAP53004 296 aa10.93□□□□□ -0.66
VPREB3-201ENST00000248948 TEKQ02763 1124 aa10.93□□□□□ -0.66
VPREB3-201ENST00000248948 CRMP1Q14194 572 aa10.93□□□□□ -0.66
VPREB3-201ENST00000248948 MEP1BQ16820 701 aa10.93□□□□□ -0.66
VPREB3-201ENST00000248948 CCDC92Q53HC0 331 aaPredicted RBP10.93□□□□□ -0.66
VPREB3-201ENST00000248948 ELFN2Q5R3F8 820 aa10.93□□□□□ -0.66
VPREB3-201ENST00000248948 ZNF362Q5T0B9 420 aaPredicted RBP10.93□□□□□ -0.66
VPREB3-201ENST00000248948 C1orf146Q5VVC0 180 aa10.93□□□□□ -0.66
VPREB3-201ENST00000248948 SLC27A4Q6P1M0 643 aa10.93□□□□□ -0.66
VPREB3-201ENST00000248948 TMEM179BQ7Z7N9 219 aa10.93□□□□□ -0.66
VPREB3-201ENST00000248948 ZNF786Q8N393 782 aa10.93□□□□□ -0.66
VPREB3-201ENST00000248948 SLC25A40Q8TBP6 338 aa10.93□□□□□ -0.66
VPREB3-201ENST00000248948 KLF14Q8TD94 323 aaPredicted RBP10.93□□□□□ -0.66
VPREB3-201ENST00000248948 DUS3LQ96G46 650 aaKnown RBP10.93□□□□□ -0.66
VPREB3-201ENST00000248948 NMNAT2Q9BZQ4 307 aa10.93□□□□□ -0.66
VPREB3-201ENST00000248948 SRA1Q9HD15 236 aaKnown RBP10.93□□□□□ -0.66
VPREB3-201ENST00000248948 HINT3Q9NQE9 182 aaKnown RBP10.93□□□□□ -0.66
VPREB3-201ENST00000248948 CYSLTR2Q9NS75 346 aa10.93□□□□□ -0.66
VPREB3-201ENST00000248948 NKIRAS2Q9NYR9 191 aa10.93□□□□□ -0.66
VPREB3-201ENST00000248948 TAAR3PQ9P1P4 343 aa10.93□□□□□ -0.66
VPREB3-201ENST00000248948 CYB5R1Q9UHQ9 305 aa10.93□□□□□ -0.66
VPREB3-201ENST00000248948 COMMD3-BMI1R4GMX3 469 aa10.93□□□□□ -0.66
VPREB3-201ENST00000248948 CD5LO43866 347 aa10.92□□□□□ -0.66
VPREB3-201ENST00000248948 CIB2O75838 187 aa10.92□□□□□ -0.66
VPREB3-201ENST00000248948 GPANK1O95872 356 aa10.92□□□□□ -0.66
VPREB3-201ENST00000248948 CLPTM1O96005 669 aa10.92□□□□□ -0.66
VPREB3-201ENST00000248948 HLA-DQA2P01906 255 aa10.92□□□□□ -0.66
VPREB3-201ENST00000248948 NAT2P11245 290 aa10.92□□□□□ -0.66
VPREB3-201ENST00000248948 FCGR1AP12314 374 aa10.92□□□□□ -0.66
VPREB3-201ENST00000248948 OSMP13725 252 aa10.92□□□□□ -0.66
VPREB3-201ENST00000248948 USF1P22415 310 aaPredicted RBP10.92□□□□□ -0.66
VPREB3-201ENST00000248948 GGT2P36268 569 aa10.92□□□□□ -0.66
VPREB3-201ENST00000248948 LIPAP38571 399 aa10.92□□□□□ -0.66
VPREB3-201ENST00000248948 ECH1Q13011 328 aa10.92□□□□□ -0.66
VPREB3-201ENST00000248948 ATP6AP1Q15904 470 aa10.92□□□□□ -0.66
VPREB3-201ENST00000248948 TMEM249Q2WGJ8 235 aa10.92□□□□□ -0.66
VPREB3-201ENST00000248948 KRTAP27-1Q3LI81 207 aa10.92□□□□□ -0.66
VPREB3-201ENST00000248948 FAM209AQ5JX71 171 aa10.92□□□□□ -0.66
VPREB3-201ENST00000248948 SPATA46Q5T0L3 261 aa10.92□□□□□ -0.66
VPREB3-201ENST00000248948 CFAP77Q6ZQR2 320 aa10.92□□□□□ -0.66
VPREB3-201ENST00000248948 ASRGL1Q7L266 308 aa10.92□□□□□ -0.66
VPREB3-201ENST00000248948 ZCCHC24Q8N2G6 241 aaKnown RBP10.92□□□□□ -0.66
VPREB3-201ENST00000248948 CYB561A3Q8NBI2 242 aa10.92□□□□□ -0.66
VPREB3-201ENST00000248948 UBASH3BQ8TF42 649 aa10.92□□□□□ -0.66
VPREB3-201ENST00000248948 UTP4Q969X6 686 aaKnown RBP10.92□□□□□ -0.66
VPREB3-201ENST00000248948 ATF6BQ99941 703 aa10.92□□□□□ -0.66
VPREB3-201ENST00000248948 OR2J1Q9GZK6 312 aa10.92□□□□□ -0.66
VPREB3-201ENST00000248948 BPESC1Q9GZL8 116 aa10.92□□□□□ -0.66
VPREB3-201ENST00000248948 DDX28Q9NUL7 540 aaKnown RBP10.92□□□□□ -0.66
VPREB3-201ENST00000248948 MRPL22Q9NWU5 206 aaKnown RBP10.92□□□□□ -0.66
VPREB3-201ENST00000248948 KIF17Q9P2E2 1029 aa10.92□□□□□ -0.66
VPREB3-201ENST00000248948 PLSCR5A0PG75 271 aa10.91□□□□□ -0.66
VPREB3-201ENST00000248948 TLX2O43763 284 aaPredicted RBP10.91□□□□□ -0.66
VPREB3-201ENST00000248948 TIPRLO75663 272 aa10.91□□□□□ -0.66
VPREB3-201ENST00000248948 NCR1O76036 304 aa10.91□□□□□ -0.66
VPREB3-201ENST00000248948 NGFP01138 241 aa10.91□□□□□ -0.66
VPREB3-201ENST00000248948 ADH4P08319 380 aa10.91□□□□□ -0.66
VPREB3-201ENST00000248948 ZNF823P16415 610 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms