RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 G6PC2Q9NQR9 355 aa12.52□□□□□ -0.41
SDF2-201ENST00000247020 OR52A1Q9UKL2 312 aa12.52□□□□□ -0.41
SDF2-201ENST00000247020 ARHGAP21Q5T5U3 1957 aa12.51□□□□□ -0.41
SDF2-201ENST00000247020 TRBV5-7A0A0A0MS05 114 aa12.51□□□□□ -0.41
SDF2-201ENST00000247020 TMEM269A0A1B0GVZ9 245 aa12.51□□□□□ -0.41
SDF2-201ENST00000247020 DVL2O14641 736 aa12.51□□□□□ -0.41
SDF2-201ENST00000247020 PNPP00491 289 aa12.51□□□□□ -0.41
SDF2-201ENST00000247020 APOC1P02654 83 aa12.51□□□□□ -0.41
SDF2-201ENST00000247020 SRMP19623 302 aa12.51□□□□□ -0.41
SDF2-201ENST00000247020 ACHEP22303 614 aa12.51□□□□□ -0.41
SDF2-201ENST00000247020 HSD11B1P28845 292 aa12.51□□□□□ -0.41
SDF2-201ENST00000247020 PPP3R1P63098 170 aa12.51□□□□□ -0.41
SDF2-201ENST00000247020 MFGE8Q08431 387 aaPredicted RBP12.51□□□□□ -0.41
SDF2-201ENST00000247020 DDI2Q5TDH0 399 aa12.51□□□□□ -0.41
SDF2-201ENST00000247020 SPATC1Q76KD6 591 aa12.51□□□□□ -0.41
SDF2-201ENST00000247020 ZNF627Q7L945 461 aa12.51□□□□□ -0.41
SDF2-201ENST00000247020 TUSC5Q8IXB3 177 aa12.51□□□□□ -0.41
SDF2-201ENST00000247020 CEP19Q96LK0 163 aa12.51□□□□□ -0.41
SDF2-201ENST00000247020 KCNS3Q9BQ31 491 aa12.51□□□□□ -0.41
SDF2-201ENST00000247020 SLITRK2Q9H156 845 aa12.51□□□□□ -0.41
SDF2-201ENST00000247020 NOX4Q9NPH5 578 aa12.51□□□□□ -0.41
SDF2-201ENST00000247020 FAM206AQ9NX38 181 aa12.51□□□□□ -0.41
SDF2-201ENST00000247020 EMC9Q9Y3B6 208 aa12.51□□□□□ -0.41
SDF2-201ENST00000247020 CMAHPQ9Y471 501 aa12.51□□□□□ -0.41
SDF2-201ENST00000247020 NCOA6Q14686 2063 aaPredicted RBP12.51□□□□□ -0.41
SDF2-201ENST00000247020 SLC22A20A6NK97 555 aa12.5□□□□□ -0.41
SDF2-201ENST00000247020 NOTOA8MTQ0 251 aa12.5□□□□□ -0.41
SDF2-201ENST00000247020 CRYABP02511 175 aaKnown RBP12.5□□□□□ -0.41
SDF2-201ENST00000247020 PPP5CP53041 499 aa12.5□□□□□ -0.41
SDF2-201ENST00000247020 PCBD1P61457 104 aa12.5□□□□□ -0.41
SDF2-201ENST00000247020 SCRN3Q0VDG4 424 aa12.5□□□□□ -0.41
SDF2-201ENST00000247020 TAF13Q15543 124 aa12.5□□□□□ -0.41
SDF2-201ENST00000247020 SPANXN2Q5MJ10 180 aa12.5□□□□□ -0.41
SDF2-201ENST00000247020 FAM27D1Q5T7N8 215 aa12.5□□□□□ -0.41
SDF2-201ENST00000247020 BCL2L15Q5TBC7 163 aa12.5□□□□□ -0.41
SDF2-201ENST00000247020 SFXN4Q6P4A7 337 aa12.5□□□□□ -0.41
SDF2-201ENST00000247020 ABHD12BQ7Z5M8 362 aaPredicted RBP12.5□□□□□ -0.41
SDF2-201ENST00000247020 APH1AQ96BI3 265 aa12.5□□□□□ -0.41
SDF2-201ENST00000247020 ZNF775Q96BV0 537 aaPredicted RBP12.5□□□□□ -0.41
SDF2-201ENST00000247020 GMPPAQ96IJ6 420 aaPredicted RBP12.5□□□□□ -0.41
SDF2-201ENST00000247020 ALKBH3Q96Q83 286 aaPredicted RBP12.5□□□□□ -0.41
SDF2-201ENST00000247020 KCNJ15Q99712 375 aa12.5□□□□□ -0.41
SDF2-201ENST00000247020 ATF6BQ99941 703 aa12.5□□□□□ -0.41
SDF2-201ENST00000247020 CLCF1Q9UBD9 225 aa12.5□□□□□ -0.41
SDF2-201ENST00000247020 NUFIP1Q9UHK0 495 aaKnown RBP12.5□□□□□ -0.41
SDF2-201ENST00000247020 ADAM30Q9UKF2 790 aa12.5□□□□□ -0.41
SDF2-201ENST00000247020 FBXL3Q9UKT7 428 aa12.5□□□□□ -0.41
SDF2-201ENST00000247020 HHLA2Q9UM44 414 aa12.5□□□□□ -0.41
SDF2-201ENST00000247020 CACNA1CQ13936 2221 aa12.5□□□□□ -0.41
SDF2-201ENST00000247020 AKAP13Q12802 2813 aa12.49□□□□□ -0.41
SDF2-201ENST00000247020 A0A0G2JK05 382 aa12.49□□□□□ -0.41
SDF2-201ENST00000247020 A0A1B0GTH9 108 aa12.49□□□□□ -0.41
SDF2-201ENST00000247020 CTDSP2O14595 271 aa12.49□□□□□ -0.41
SDF2-201ENST00000247020 PIN1P1O15428 100 aa12.49□□□□□ -0.41
SDF2-201ENST00000247020 KRT33AO76009 404 aa12.49□□□□□ -0.41
SDF2-201ENST00000247020 FARS2O95363 451 aaKnown RBP12.49□□□□□ -0.41
SDF2-201ENST00000247020 CD2P06729 351 aa12.49□□□□□ -0.41
SDF2-201ENST00000247020 PSMD7P51665 324 aa12.49□□□□□ -0.41
SDF2-201ENST00000247020 ECH1Q13011 328 aa12.49□□□□□ -0.41
SDF2-201ENST00000247020 SF3B4Q15427 424 aaKnown RBP eCLIP12.49□□□□□ -0.41
SDF2-201ENST00000247020 C3AR1Q16581 482 aa12.49□□□□□ -0.41
SDF2-201ENST00000247020 CEACAM16Q2WEN9 425 aa12.49□□□□□ -0.41
SDF2-201ENST00000247020 ELFN2Q5R3F8 820 aa12.49□□□□□ -0.41
SDF2-201ENST00000247020 TSPO2Q5TGU0 170 aa12.49□□□□□ -0.41
SDF2-201ENST00000247020 ELMOD2Q8IZ81 293 aa12.49□□□□□ -0.41
SDF2-201ENST00000247020 RBMXL3Q8N7X1 1067 aaKnown RBP12.49□□□□□ -0.41
SDF2-201ENST00000247020 TAAR6Q96RI8 345 aa12.49□□□□□ -0.41
SDF2-201ENST00000247020 SLC30A2Q9BRI3 323 aa12.49□□□□□ -0.41
SDF2-201ENST00000247020 MRI1Q9BV20 369 aa12.49□□□□□ -0.41
SDF2-201ENST00000247020 HDHD2Q9H0R4 259 aa12.49□□□□□ -0.41
SDF2-201ENST00000247020 SLC22A13Q9Y226 551 aa12.49□□□□□ -0.41
SDF2-201ENST00000247020 TTLL8A6PVC2 850 aa12.48□□□□□ -0.41
SDF2-201ENST00000247020 AHRRA9YTQ3 701 aa12.48□□□□□ -0.41
SDF2-201ENST00000247020 ZNF587BE7ETH6 402 aa12.48□□□□□ -0.41
SDF2-201ENST00000247020 RER1O15258 196 aa12.48□□□□□ -0.41
SDF2-201ENST00000247020 RGS5O15539 181 aa12.48□□□□□ -0.41
SDF2-201ENST00000247020 SS18L1O75177 396 aaPredicted RBP12.48□□□□□ -0.41
SDF2-201ENST00000247020 APEX1P27695 318 aaKnown RBP12.48□□□□□ -0.41
SDF2-201ENST00000247020 OTX1P32242 354 aaPredicted RBP12.48□□□□□ -0.41
SDF2-201ENST00000247020 TNFSF8P32971 234 aa12.48□□□□□ -0.41
SDF2-201ENST00000247020 TMPRSS3P57727 454 aa12.48□□□□□ -0.41
SDF2-201ENST00000247020 RAB35Q15286 201 aa12.48□□□□□ -0.41
SDF2-201ENST00000247020 LINGO2Q7L985 606 aa12.48□□□□□ -0.41
SDF2-201ENST00000247020 FGD2Q7Z6J4 655 aa12.48□□□□□ -0.41
SDF2-201ENST00000247020 SLC22A24Q8N4F4 322 aa12.48□□□□□ -0.41
SDF2-201ENST00000247020 SNRNP27Q8WVK2 155 aaKnown RBP12.48□□□□□ -0.41
SDF2-201ENST00000247020 TSEN15Q8WW01 171 aaKnown RBP12.48□□□□□ -0.41
SDF2-201ENST00000247020 TMEM106AQ96A25 262 aa12.48□□□□□ -0.41
SDF2-201ENST00000247020 ZNF837Q96EG3 531 aaPredicted RBP12.48□□□□□ -0.41
SDF2-201ENST00000247020 CALHM2Q9HA72 323 aa12.48□□□□□ -0.41
SDF2-201ENST00000247020 TCF7L1Q9HCS4 588 aa12.48□□□□□ -0.41
SDF2-201ENST00000247020 ABRACLQ9P1F3 81 aa12.48□□□□□ -0.41
SDF2-201ENST00000247020 ATPIF1Q9UII2 106 aa12.48□□□□□ -0.41
SDF2-201ENST00000247020 GTF2A1LQ9UNN4 478 aa12.48□□□□□ -0.41
SDF2-201ENST00000247020 FOXJ3Q9UPW0 622 aa12.48□□□□□ -0.41
SDF2-201ENST00000247020 DHDHQ9UQ10 334 aa12.48□□□□□ -0.41
SDF2-201ENST00000247020 SLC19A2O60779 497 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 SLC34A2O95436 690 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 PDGFAP04085 211 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 FSTP19883 344 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms