RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 TMEM105Q8N8V8 129 aa13.47□□□□□ -0.25
DDX49-201ENST00000247003 FOXRED1Q96CU9 486 aaPredicted RBP13.47□□□□□ -0.25
DDX49-201ENST00000247003 NECAB3Q96P71 396 aaPredicted RBP13.47□□□□□ -0.25
DDX49-201ENST00000247003 ZPBPQ9BS86 351 aa13.47□□□□□ -0.25
DDX49-201ENST00000247003 GHITMQ9H3K2 345 aa13.47□□□□□ -0.25
DDX49-201ENST00000247003 SLA2Q9H6Q3 261 aa13.47□□□□□ -0.25
DDX49-201ENST00000247003 ZNF222Q9UK12 451 aa13.47□□□□□ -0.25
DDX49-201ENST00000247003 PADI1Q9ULC6 663 aa13.47□□□□□ -0.25
DDX49-201ENST00000247003 LOC102725191A0A1B0GVB3 256 aa13.46□□□□□ -0.25
DDX49-201ENST00000247003 P2RY10O00398 339 aa13.46□□□□□ -0.25
DDX49-201ENST00000247003 CSF1P09603 554 aa13.46□□□□□ -0.25
DDX49-201ENST00000247003 TMIGD3P0DMS9 266 aaPredicted RBP13.46□□□□□ -0.25
DDX49-201ENST00000247003 ANXA3P12429 323 aa13.46□□□□□ -0.25
DDX49-201ENST00000247003 ZNF17P17021 662 aa13.46□□□□□ -0.25
DDX49-201ENST00000247003 PSMB1P20618 241 aaKnown RBP13.46□□□□□ -0.25
DDX49-201ENST00000247003 OTX2P32243 289 aa13.46□□□□□ -0.25
DDX49-201ENST00000247003 GUCA1AP43080 201 aaPredicted RBP13.46□□□□□ -0.25
DDX49-201ENST00000247003 GZMKP49863 264 aa13.46□□□□□ -0.25
DDX49-201ENST00000247003 CSNK2A1P68400 391 aaPredicted RBP13.46□□□□□ -0.25
DDX49-201ENST00000247003 FOXK1P85037 733 aa13.46□□□□□ -0.25
DDX49-201ENST00000247003 GSG1Q2KHT4 349 aa13.46□□□□□ -0.25
DDX49-201ENST00000247003 SFRP4Q6FHJ7 346 aaPredicted RBP13.46□□□□□ -0.25
DDX49-201ENST00000247003 ADGRE4PQ86SQ3 457 aa13.46□□□□□ -0.25
DDX49-201ENST00000247003 JAGN1Q8N5M9 183 aa13.46□□□□□ -0.25
DDX49-201ENST00000247003 TMEM246Q9BRR3 403 aa13.46□□□□□ -0.25
DDX49-201ENST00000247003 NAA11Q9BSU3 229 aaPredicted RBP13.46□□□□□ -0.25
DDX49-201ENST00000247003 ATG5Q9H1Y0 275 aa13.46□□□□□ -0.25
DDX49-201ENST00000247003 FAM206AQ9NX38 181 aa13.46□□□□□ -0.25
DDX49-201ENST00000247003 NKIRAS2Q9NYR9 191 aa13.46□□□□□ -0.25
DDX49-201ENST00000247003 GDF2Q9UK05 429 aaPredicted RBP13.46□□□□□ -0.25
DDX49-201ENST00000247003 ING4Q9UNL4 249 aa13.46□□□□□ -0.25
DDX49-201ENST00000247003 SPEGQ15772 3267 aa13.46□□□□□ -0.26
DDX49-201ENST00000247003 GJE1A6NN92 205 aa13.46□□□□□ -0.26
DDX49-201ENST00000247003 SYT7O43581 403 aa13.46□□□□□ -0.26
DDX49-201ENST00000247003 SSNA1O43805 119 aa13.46□□□□□ -0.26
DDX49-201ENST00000247003 VAMP5O95183 116 aa13.46□□□□□ -0.26
DDX49-201ENST00000247003 GSTT2P0CG29 244 aa13.46□□□□□ -0.26
DDX49-201ENST00000247003 CSRP1P21291 193 aaKnown RBP13.46□□□□□ -0.26
DDX49-201ENST00000247003 FCN2Q15485 313 aa13.46□□□□□ -0.26
DDX49-201ENST00000247003 GLYATL3Q5SZD4 288 aa13.46□□□□□ -0.26
DDX49-201ENST00000247003 TMEM53Q6P2H8 277 aa13.46□□□□□ -0.26
DDX49-201ENST00000247003 C6orf15Q6UXA7 325 aaPredicted RBP13.46□□□□□ -0.26
DDX49-201ENST00000247003 ZFAND1Q8TCF1 268 aa13.46□□□□□ -0.26
DDX49-201ENST00000247003 SGCZQ96LD1 299 aa13.46□□□□□ -0.26
DDX49-201ENST00000247003 SORCS2Q96PQ0 1159 aa13.46□□□□□ -0.26
DDX49-201ENST00000247003 PIGQQ9BRB3 760 aa13.46□□□□□ -0.26
DDX49-201ENST00000247003 PBOV1Q9GZY1 135 aa13.46□□□□□ -0.26
DDX49-201ENST00000247003 ARRDC1-AS1Q9H2J1 176 aa13.46□□□□□ -0.26
DDX49-201ENST00000247003 EMC7Q9NPA0 242 aa13.46□□□□□ -0.26
DDX49-201ENST00000247003 TMEM272A0A1B0GTI8 110 aa13.45□□□□□ -0.26
DDX49-201ENST00000247003 A0A1B0GVI7 797 aa13.45□□□□□ -0.26
DDX49-201ENST00000247003 NPIPA2E9PIF3 369 aa13.45□□□□□ -0.26
DDX49-201ENST00000247003 NPIPA3F8WFD2 350 aa13.45□□□□□ -0.26
DDX49-201ENST00000247003 CBR3O75828 277 aa13.45□□□□□ -0.26
DDX49-201ENST00000247003 P04436 131 aa13.45□□□□□ -0.26
DDX49-201ENST00000247003 QDPRP09417 244 aa13.45□□□□□ -0.26
DDX49-201ENST00000247003 GNALP38405 381 aa13.45□□□□□ -0.26
DDX49-201ENST00000247003 CLDN17P56750 224 aa13.45□□□□□ -0.26
DDX49-201ENST00000247003 PSMA6P60900 246 aaKnown RBP13.45□□□□□ -0.26
DDX49-201ENST00000247003 GABREP78334 506 aa13.45□□□□□ -0.26
DDX49-201ENST00000247003 SPOCK1Q08629 439 aa13.45□□□□□ -0.26
DDX49-201ENST00000247003 ANGPT1Q15389 498 aa13.45□□□□□ -0.26
DDX49-201ENST00000247003 BCL2A1Q16548 175 aa13.45□□□□□ -0.26
DDX49-201ENST00000247003 PCGF3Q3KNV8 242 aa13.45□□□□□ -0.26
DDX49-201ENST00000247003 CCDC157Q569K6 752 aa13.45□□□□□ -0.26
DDX49-201ENST00000247003 ASPHD2Q6ICH7 369 aa13.45□□□□□ -0.26
DDX49-201ENST00000247003 TCEAL6Q6IPX3 200 aa13.45□□□□□ -0.26
DDX49-201ENST00000247003 FAM166AQ6J272 317 aa13.45□□□□□ -0.26
DDX49-201ENST00000247003 SLC25A47Q6Q0C1 308 aa13.45□□□□□ -0.26
DDX49-201ENST00000247003 NHLRC1Q6VVB1 395 aa13.45□□□□□ -0.26
DDX49-201ENST00000247003 RHOUQ7L0Q8 258 aa13.45□□□□□ -0.26
DDX49-201ENST00000247003 ELMOD2Q8IZ81 293 aa13.45□□□□□ -0.26
DDX49-201ENST00000247003 TCEAL3Q969E4 200 aa13.45□□□□□ -0.26
DDX49-201ENST00000247003 TMEM41AQ96HV5 264 aa13.45□□□□□ -0.26
DDX49-201ENST00000247003 HYLS1Q96M11 299 aa13.45□□□□□ -0.26
DDX49-201ENST00000247003 GNRHR2Q96P88 292 aa13.45□□□□□ -0.26
DDX49-201ENST00000247003 TCFL5Q9UL49 500 aa13.45□□□□□ -0.26
DDX49-201ENST00000247003 TRAV18A0A075B6X5 111 aa13.44□□□□□ -0.26
DDX49-201ENST00000247003 DCDC2BA2VCK2 349 aa13.44□□□□□ -0.26
DDX49-201ENST00000247003 ZNF814B7Z6K7 855 aa13.44□□□□□ -0.26
DDX49-201ENST00000247003 G3V3Y1 287 aa13.44□□□□□ -0.26
DDX49-201ENST00000247003 H7C417 338 aa13.44□□□□□ -0.26
DDX49-201ENST00000247003 DOK2O60496 412 aa13.44□□□□□ -0.26
DDX49-201ENST00000247003 GMDSO60547 372 aa13.44□□□□□ -0.26
DDX49-201ENST00000247003 ACSM4P0C7M7 580 aa13.44□□□□□ -0.26
DDX49-201ENST00000247003 JMJD7P0C870 316 aa13.44□□□□□ -0.26
DDX49-201ENST00000247003 PTHLHP12272 177 aa13.44□□□□□ -0.26
DDX49-201ENST00000247003 TCN2P20062 427 aa13.44□□□□□ -0.26
DDX49-201ENST00000247003 PRSS3P35030 304 aa13.44□□□□□ -0.26
DDX49-201ENST00000247003 EFNB2P52799 333 aa13.44□□□□□ -0.26
DDX49-201ENST00000247003 ZNF528Q3MIS6 628 aa13.44□□□□□ -0.26
DDX49-201ENST00000247003 METTL11BQ5VVY1 283 aa13.44□□□□□ -0.26
DDX49-201ENST00000247003 COMMD2Q86X83 199 aa13.44□□□□□ -0.26
DDX49-201ENST00000247003 OR6N1Q8NGY5 312 aa13.44□□□□□ -0.26
DDX49-201ENST00000247003 PNPLA2Q96AD5 504 aa13.44□□□□□ -0.26
DDX49-201ENST00000247003 SH2D2AQ9NP31 389 aa13.44□□□□□ -0.26
DDX49-201ENST00000247003 MTFP1Q9UDX5 166 aa13.44□□□□□ -0.26
DDX49-201ENST00000247003 CGGBP1Q9UFW8 167 aaPredicted RBP13.44□□□□□ -0.26
DDX49-201ENST00000247003 LHFPL6Q9Y693 200 aa13.44□□□□□ -0.26
DDX49-201ENST00000247003 WDFY4Q6ZS81 3184 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms