RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 GABRA2P47869 451 aa18.07■□□□□ 0.48
SOX4-201ENST00000244745 CXCL12P48061 93 aa18.07■□□□□ 0.48
SOX4-201ENST00000244745 CARD18P57730 90 aa18.07■□□□□ 0.48
SOX4-201ENST00000244745 SSTP61278 116 aa18.07■□□□□ 0.48
SOX4-201ENST00000244745 EGR3Q06889 387 aa18.07■□□□□ 0.48
SOX4-201ENST00000244745 ATPAF1Q5TC12 328 aaPredicted RBP18.07■□□□□ 0.48
SOX4-201ENST00000244745 OR52W1Q6IF63 320 aa18.07■□□□□ 0.48
SOX4-201ENST00000244745 Q6ZRG5 221 aa18.07■□□□□ 0.48
SOX4-201ENST00000244745 DPPA2Q7Z7J5 298 aa18.07■□□□□ 0.48
SOX4-201ENST00000244745 WDR5BQ86VZ2 330 aa18.07■□□□□ 0.48
SOX4-201ENST00000244745 KLK11Q9UBX7 282 aa18.07■□□□□ 0.48
SOX4-201ENST00000244745 BOKQ9UMX3 212 aaPredicted RBP18.07■□□□□ 0.48
SOX4-201ENST00000244745 BCL2L11O43521 198 aa18.07■□□□□ 0.48
SOX4-201ENST00000244745 SSX1Q16384 188 aa18.07■□□□□ 0.48
SOX4-201ENST00000244745 OR8D4Q8NGM9 314 aa18.07■□□□□ 0.48
SOX4-201ENST00000244745 SLAMF6Q96DU3 332 aa18.07■□□□□ 0.48
SOX4-201ENST00000244745 IL21Q9HBE4 155 aa18.07■□□□□ 0.48
SOX4-201ENST00000244745 GPR173Q9NS66 373 aa18.07■□□□□ 0.48
SOX4-201ENST00000244745 OBP2AQ9NY56 170 aa18.07■□□□□ 0.48
SOX4-201ENST00000244745 ING1Q9UK53 422 aaPredicted RBP18.07■□□□□ 0.48
SOX4-201ENST00000244745 SLC22A13Q9Y226 551 aa18.07■□□□□ 0.48
SOX4-201ENST00000244745 TAAR5O14804 337 aa18.07■□□□□ 0.48
SOX4-201ENST00000244745 ZNF683Q8IZ20 524 aa18.07■□□□□ 0.48
SOX4-201ENST00000244745 PRSS35Q8N3Z0 413 aa18.07■□□□□ 0.48
SOX4-201ENST00000244745 C6orf106Q9H6K1 298 aaPredicted RBP18.07■□□□□ 0.48
SOX4-201ENST00000244745 KCNG2Q9UJ96 466 aa18.07■□□□□ 0.48
SOX4-201ENST00000244745 TMEM184BQ9Y519 407 aaPredicted RBP18.07■□□□□ 0.48
SOX4-201ENST00000244745 F10P00742 488 aa18.07■□□□□ 0.48
SOX4-201ENST00000244745 MMP15P51511 669 aa18.07■□□□□ 0.48
SOX4-201ENST00000244745 TESK1Q15569 626 aa18.07■□□□□ 0.48
SOX4-201ENST00000244745 FAM71CQ8NEG0 241 aa18.07■□□□□ 0.48
SOX4-201ENST00000244745 SRPXP78539 464 aa18.06■□□□□ 0.48
SOX4-201ENST00000244745 PLGLAQ15195 96 aa18.06■□□□□ 0.48
SOX4-201ENST00000244745 ZNF239Q16600 458 aaKnown RBP18.06■□□□□ 0.48
SOX4-201ENST00000244745 CLEC1AQ8NC01 280 aa18.06■□□□□ 0.48
SOX4-201ENST00000244745 CALHM2Q9HA72 323 aa18.06■□□□□ 0.48
SOX4-201ENST00000244745 NME1P15531 152 aaKnown RBP18.06■□□□□ 0.48
SOX4-201ENST00000244745 ADGRG3Q86Y34 549 aa18.06■□□□□ 0.48
SOX4-201ENST00000244745 OR2A1Q8NGT9 310 aa18.06■□□□□ 0.48
SOX4-201ENST00000244745 TAS2R5Q9NYW4 299 aa18.06■□□□□ 0.48
SOX4-201ENST00000244745 MDFIC2A0A1B0GVS7 189 aa18.06■□□□□ 0.48
SOX4-201ENST00000244745 A0A1B0GX78 115 aa18.06■□□□□ 0.48
SOX4-201ENST00000244745 SMUG1Q53HV7 270 aa18.06■□□□□ 0.48
SOX4-201ENST00000244745 DOK3Q7L591 496 aa18.06■□□□□ 0.48
SOX4-201ENST00000244745 BAGE3Q86Y29 109 aa18.06■□□□□ 0.48
SOX4-201ENST00000244745 BAGE2Q86Y30 109 aa18.06■□□□□ 0.48
SOX4-201ENST00000244745 CHST11Q9NPF2 352 aa18.06■□□□□ 0.48
SOX4-201ENST00000244745 MRPL22Q9NWU5 206 aaKnown RBP18.06■□□□□ 0.48
SOX4-201ENST00000244745 A0A087WV62 115 aa18.06■□□□□ 0.48
SOX4-201ENST00000244745 CHRM2P08172 466 aa18.06■□□□□ 0.48
SOX4-201ENST00000244745 RNF212Q495C1 297 aa18.06■□□□□ 0.48
SOX4-201ENST00000244745 TMEM71Q6P5X7 295 aa18.06■□□□□ 0.48
SOX4-201ENST00000244745 SFT2D1Q8WV19 159 aa18.06■□□□□ 0.48
SOX4-201ENST00000244745 SUCNR1Q9BXA5 334 aa18.06■□□□□ 0.48
SOX4-201ENST00000244745 B3GALT5Q9Y2C3 310 aa18.06■□□□□ 0.48
SOX4-201ENST00000244745 TNFRSF10CO14798 259 aa18.06■□□□□ 0.48
SOX4-201ENST00000244745 PSMB6P28072 239 aa18.06■□□□□ 0.48
SOX4-201ENST00000244745 METAP1P53582 386 aa18.06■□□□□ 0.48
SOX4-201ENST00000244745 DMBX1Q8NFW5 382 aa18.06■□□□□ 0.48
SOX4-201ENST00000244745 WDR89Q96FK6 387 aaPredicted RBP18.06■□□□□ 0.48
SOX4-201ENST00000244745 ST6GAL2Q96JF0 529 aa18.06■□□□□ 0.48
SOX4-201ENST00000244745 WDFY2Q96P53 400 aa18.06■□□□□ 0.48
SOX4-201ENST00000244745 C19orf43Q9BQ61 176 aa18.06■□□□□ 0.48
SOX4-201ENST00000244745 APOBEC1P41238 236 aaKnown RBP18.05■□□□□ 0.48
SOX4-201ENST00000244745 LINC00303Q3SY05 128 aa18.05■□□□□ 0.48
SOX4-201ENST00000244745 LSMEM1Q8N8F7 131 aa18.05■□□□□ 0.48
SOX4-201ENST00000244745 GJC3Q8NFK1 279 aa18.05■□□□□ 0.48
SOX4-201ENST00000244745 C16orf52Q8NHV5 167 aa18.05■□□□□ 0.48
SOX4-201ENST00000244745 PIGQQ9BRB3 760 aa18.05■□□□□ 0.48
SOX4-201ENST00000244745 RAB9BQ9NP90 201 aa18.05■□□□□ 0.48
SOX4-201ENST00000244745 C17orf112F2Z3M2 114 aa18.05■□□□□ 0.48
SOX4-201ENST00000244745 RPA2P15927 270 aa18.05■□□□□ 0.48
SOX4-201ENST00000244745 SDHBP21912 280 aa18.05■□□□□ 0.48
SOX4-201ENST00000244745 AADACP22760 399 aa18.05■□□□□ 0.48
SOX4-201ENST00000244745 RAB11AP62491 216 aa18.05■□□□□ 0.48
SOX4-201ENST00000244745 PPP2CBP62714 309 aa18.05■□□□□ 0.48
SOX4-201ENST00000244745 PPP2CAP67775 309 aa18.05■□□□□ 0.48
SOX4-201ENST00000244745 CDK5Q00535 292 aa18.05■□□□□ 0.48
SOX4-201ENST00000244745 ELAVL1Q15717 326 aaKnown RBP18.05■□□□□ 0.48
SOX4-201ENST00000244745 TMEM81Q6P7N7 255 aa18.05■□□□□ 0.48
SOX4-201ENST00000244745 BRICD5Q6PL45 260 aa18.05■□□□□ 0.48
SOX4-201ENST00000244745 LIMS2Q7Z4I7 341 aa18.05■□□□□ 0.48
SOX4-201ENST00000244745 BPIFCQ8NFQ6 507 aa18.05■□□□□ 0.48
SOX4-201ENST00000244745 SPACA5Q96QH8 159 aa18.05■□□□□ 0.48
SOX4-201ENST00000244745 LAT2Q9GZY6 243 aa18.05■□□□□ 0.48
SOX4-201ENST00000244745 SLCO1C1Q9NYB5 712 aa18.05■□□□□ 0.48
SOX4-201ENST00000244745 GNG13Q9P2W3 67 aa18.05■□□□□ 0.48
SOX4-201ENST00000244745 ALOX12BO75342 701 aa18.05■□□□□ 0.48
SOX4-201ENST00000244745 CLDN1O95832 211 aa18.05■□□□□ 0.48
SOX4-201ENST00000244745 ABOP16442 354 aa18.05■□□□□ 0.48
SOX4-201ENST00000244745 ZNF561Q8N587 486 aa18.05■□□□□ 0.48
SOX4-201ENST00000244745 TRAV1-2A0A0B4J238 106 aa18.05■□□□□ 0.48
SOX4-201ENST00000244745 LEUTXA8MZ59 168 aa18.05■□□□□ 0.48
SOX4-201ENST00000244745 PPM1DO15297 605 aa18.05■□□□□ 0.48
SOX4-201ENST00000244745 ST3GAL2Q16842 350 aa18.05■□□□□ 0.48
SOX4-201ENST00000244745 CHRNA9Q9UGM1 479 aa18.05■□□□□ 0.48
SOX4-201ENST00000244745 ST6GAL1P15907 406 aa18.05■□□□□ 0.48
SOX4-201ENST00000244745 ARIH2OSQ8N7S6 290 aa18.05■□□□□ 0.48
SOX4-201ENST00000244745 NUDCD2Q8WVJ2 157 aa18.04■□□□□ 0.48
SOX4-201ENST00000244745 CPN1P15169 458 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms