RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 HOXB1P14653 301 aaPredicted RBP17.5■□□□□ 0.39
SNRPA-201ENST00000243563 HOXC12P31275 282 aa17.5■□□□□ 0.39
SNRPA-201ENST00000243563 ZNF83P51522 516 aa17.5■□□□□ 0.39
SNRPA-201ENST00000243563 IDH3GP51553 393 aaPredicted RBP17.5■□□□□ 0.39
SNRPA-201ENST00000243563 SORDQ00796 357 aa17.5■□□□□ 0.39
SNRPA-201ENST00000243563 SCRN3Q0VDG4 424 aa17.5■□□□□ 0.39
SNRPA-201ENST00000243563 ZNF322Q6U7Q0 402 aaPredicted RBP17.5■□□□□ 0.39
SNRPA-201ENST00000243563 WFDC8Q8IUA0 241 aa17.5■□□□□ 0.39
SNRPA-201ENST00000243563 STX19Q8N4C7 294 aa17.5■□□□□ 0.39
SNRPA-201ENST00000243563 PAQR4Q8N4S7 273 aaPredicted RBP17.5■□□□□ 0.39
SNRPA-201ENST00000243563 ACBD7Q8N6N7 88 aa17.5■□□□□ 0.39
SNRPA-201ENST00000243563 ZNF454Q8N9F8 522 aa17.5■□□□□ 0.39
SNRPA-201ENST00000243563 GJC3Q8NFK1 279 aa17.5■□□□□ 0.39
SNRPA-201ENST00000243563 RNF133Q8WVZ7 376 aa17.5■□□□□ 0.39
SNRPA-201ENST00000243563 NANOS1Q8WY41 292 aaKnown RBP17.5■□□□□ 0.39
SNRPA-201ENST00000243563 JAM3Q9BX67 310 aa17.5■□□□□ 0.39
SNRPA-201ENST00000243563 OR10A4Q9H209 315 aa17.5■□□□□ 0.39
SNRPA-201ENST00000243563 KCNN2Q9H2S1 579 aa17.5■□□□□ 0.39
SNRPA-201ENST00000243563 ISG20L2Q9H9L3 353 aaKnown RBP17.5■□□□□ 0.39
SNRPA-201ENST00000243563 CENPMQ9NSP4 180 aa17.5■□□□□ 0.39
SNRPA-201ENST00000243563 MRM2Q9UI43 246 aaKnown RBP17.5■□□□□ 0.39
SNRPA-201ENST00000243563 IGHV1-18A0A0C4DH31 117 aa17.5■□□□□ 0.39
SNRPA-201ENST00000243563 OR6C6A6NF89 314 aa17.5■□□□□ 0.39
SNRPA-201ENST00000243563 CLDN1O95832 211 aa17.5■□□□□ 0.39
SNRPA-201ENST00000243563 IGKV3-15P01624 115 aa17.5■□□□□ 0.39
SNRPA-201ENST00000243563 CBR1P16152 277 aa17.5■□□□□ 0.39
SNRPA-201ENST00000243563 DCKP27707 260 aa17.5■□□□□ 0.39
SNRPA-201ENST00000243563 OPRL1P41146 370 aa17.5■□□□□ 0.39
SNRPA-201ENST00000243563 PCBD1P61457 104 aa17.5■□□□□ 0.39
SNRPA-201ENST00000243563 RAB35Q15286 201 aa17.5■□□□□ 0.39
SNRPA-201ENST00000243563 TP53I3Q53FA7 332 aa17.5■□□□□ 0.39
SNRPA-201ENST00000243563 ELFN2Q5R3F8 820 aa17.5■□□□□ 0.39
SNRPA-201ENST00000243563 OR2G6Q5TZ20 316 aa17.5■□□□□ 0.39
SNRPA-201ENST00000243563 TMEM53Q6P2H8 277 aa17.5■□□□□ 0.39
SNRPA-201ENST00000243563 P2RY8Q86VZ1 359 aa17.5■□□□□ 0.39
SNRPA-201ENST00000243563 RNF166Q96A37 237 aaPredicted RBP17.5■□□□□ 0.39
SNRPA-201ENST00000243563 CRNNQ9UBG3 495 aaPredicted RBP17.5■□□□□ 0.39
SNRPA-201ENST00000243563 COL12A1Q99715 3063 aa17.49■□□□□ 0.39
SNRPA-201ENST00000243563 TMCC2O75069 709 aa17.49■□□□□ 0.39
SNRPA-201ENST00000243563 ABHD16AO95870 558 aa17.49■□□□□ 0.39
SNRPA-201ENST00000243563 IGLV1-44P01699 117 aa17.49■□□□□ 0.39
SNRPA-201ENST00000243563 ARR3P36575 388 aa17.49■□□□□ 0.39
SNRPA-201ENST00000243563 MAP2K4P45985 399 aa17.49■□□□□ 0.39
SNRPA-201ENST00000243563 OR12D2P58182 307 aa17.49■□□□□ 0.39
SNRPA-201ENST00000243563 GABARAPL2P60520 117 aa17.49■□□□□ 0.39
SNRPA-201ENST00000243563 ACTC1P68032 377 aa17.49■□□□□ 0.39
SNRPA-201ENST00000243563 ACTA1P68133 377 aa17.49■□□□□ 0.39
SNRPA-201ENST00000243563 IRF3Q14653 427 aa17.49■□□□□ 0.39
SNRPA-201ENST00000243563 CCDC36Q8IYA8 594 aa17.49■□□□□ 0.39
SNRPA-201ENST00000243563 OR1F12Q8NHA8 337 aa17.49■□□□□ 0.39
SNRPA-201ENST00000243563 IPCEF1Q8WWN9 437 aaPredicted RBP17.49■□□□□ 0.39
SNRPA-201ENST00000243563 HSD17B8Q92506 261 aa17.49■□□□□ 0.39
SNRPA-201ENST00000243563 OR8B4Q96RC9 309 aa17.49■□□□□ 0.39
SNRPA-201ENST00000243563 MED18Q9BUE0 208 aa17.49■□□□□ 0.39
SNRPA-201ENST00000243563 ALG8Q9BVK2 526 aa17.49■□□□□ 0.39
SNRPA-201ENST00000243563 YTHDF1Q9BYJ9 559 aaKnown RBP17.49■□□□□ 0.39
SNRPA-201ENST00000243563 OBP2BQ9NPH6 170 aa17.49■□□□□ 0.39
SNRPA-201ENST00000243563 LRP12Q9Y561 859 aa17.49■□□□□ 0.39
SNRPA-201ENST00000243563 UTP20O75691 2785 aaKnown RBP17.49■□□□□ 0.39
SNRPA-201ENST00000243563 SIAH2O43255 324 aa17.48■□□□□ 0.39
SNRPA-201ENST00000243563 RGS10O43665 173 aa17.48■□□□□ 0.39
SNRPA-201ENST00000243563 CECR9P0C854 216 aa17.48■□□□□ 0.39
SNRPA-201ENST00000243563 IGFBP2P18065 325 aa17.48■□□□□ 0.39
SNRPA-201ENST00000243563 CRYGSP22914 178 aa17.48■□□□□ 0.39
SNRPA-201ENST00000243563 EEF1B2P24534 225 aaKnown RBP17.48■□□□□ 0.39
SNRPA-201ENST00000243563 HTR5AP47898 357 aa17.48■□□□□ 0.39
SNRPA-201ENST00000243563 GALEQ14376 348 aa17.48■□□□□ 0.39
SNRPA-201ENST00000243563 KRTAP27-1Q3LI81 207 aa17.48■□□□□ 0.39
SNRPA-201ENST00000243563 KCTD21Q4G0X4 260 aa17.48■□□□□ 0.39
SNRPA-201ENST00000243563 NAA40Q86UY6 237 aa17.48■□□□□ 0.39
SNRPA-201ENST00000243563 MYDGFQ969H8 173 aa17.48■□□□□ 0.39
SNRPA-201ENST00000243563 MUCL1Q96DR8 90 aa17.48■□□□□ 0.39
SNRPA-201ENST00000243563 MNTQ99583 582 aa17.48■□□□□ 0.39
SNRPA-201ENST00000243563 DDX28Q9NUL7 540 aaKnown RBP17.48■□□□□ 0.39
SNRPA-201ENST00000243563 PCDHGB1Q9Y5G3 927 aa17.48■□□□□ 0.39
SNRPA-201ENST00000243563 HEATR1Q9H583 2144 aaKnown RBP17.48■□□□□ 0.39
SNRPA-201ENST00000243563 A1L4Q6 167 aa17.47■□□□□ 0.39
SNRPA-201ENST00000243563 C5orf63A6NC05 138 aa17.47■□□□□ 0.39
SNRPA-201ENST00000243563 M0R1B8 84 aa17.47■□□□□ 0.39
SNRPA-201ENST00000243563 ROM1Q03395 351 aa17.47■□□□□ 0.39
SNRPA-201ENST00000243563 SPOCK1Q08629 439 aa17.47■□□□□ 0.39
SNRPA-201ENST00000243563 CDONQ4KMG0 1287 aa17.47■□□□□ 0.39
SNRPA-201ENST00000243563 DPPA2Q7Z7J5 298 aa17.47■□□□□ 0.39
SNRPA-201ENST00000243563 ZNF485Q8NCK3 441 aa17.47■□□□□ 0.39
SNRPA-201ENST00000243563 LRRC46Q96FV0 321 aa17.47■□□□□ 0.39
SNRPA-201ENST00000243563 ATF6BQ99941 703 aa17.47■□□□□ 0.39
SNRPA-201ENST00000243563 WACQ9BTA9 647 aa17.47■□□□□ 0.39
SNRPA-201ENST00000243563 CCDC90BQ9GZT6 254 aa17.47■□□□□ 0.39
SNRPA-201ENST00000243563 ELOVL3Q9HB03 270 aa17.47■□□□□ 0.39
SNRPA-201ENST00000243563 IKZF2Q9UKS7 526 aa17.47■□□□□ 0.39
SNRPA-201ENST00000243563 BLOC1S6Q9UL45 172 aa17.47■□□□□ 0.39
SNRPA-201ENST00000243563 TMEM14AQ9Y6G1 99 aa17.47■□□□□ 0.39
SNRPA-201ENST00000243563 HELZ2Q9BYK8 2649 aaKnown RBP17.47■□□□□ 0.39
SNRPA-201ENST00000243563 IRGMA1A4Y4 181 aa17.47■□□□□ 0.39
SNRPA-201ENST00000243563 ZNF878C9JN71 531 aa17.47■□□□□ 0.39
SNRPA-201ENST00000243563 PTHP01270 115 aa17.47■□□□□ 0.39
SNRPA-201ENST00000243563 SERPINA5P05154 406 aa17.47■□□□□ 0.39
SNRPA-201ENST00000243563 PRSS48Q7RTY5 328 aa17.47■□□□□ 0.39
SNRPA-201ENST00000243563 POM121L2Q96KW2 1035 aa17.47■□□□□ 0.39
SNRPA-201ENST00000243563 C4orf36Q96KX1 117 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms