RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 BCL2L15Q5TBC7 163 aa16.38■□□□□ 0.21
HOXC11-201ENST00000243082 TMEM244Q5VVB8 128 aa16.38■□□□□ 0.21
HOXC11-201ENST00000243082 FAM166AQ6J272 317 aa16.38■□□□□ 0.21
HOXC11-201ENST00000243082 SIAH3Q8IW03 269 aa16.38■□□□□ 0.21
HOXC11-201ENST00000243082 ZIC4Q8N9L1 334 aa16.38■□□□□ 0.21
HOXC11-201ENST00000243082 OR13C3Q8NGS6 347 aa16.38■□□□□ 0.21
HOXC11-201ENST00000243082 OR2AJ1Q8NGZ0 328 aa16.38■□□□□ 0.21
HOXC11-201ENST00000243082 TMEM54Q969K7 222 aa16.38■□□□□ 0.21
HOXC11-201ENST00000243082 POLR1DQ9Y2S0 133 aa16.38■□□□□ 0.21
HOXC11-201ENST00000243082 PCNX2A6NKB5 2137 aa16.38■□□□□ 0.21
HOXC11-201ENST00000243082 NPIPA2E9PIF3 369 aa16.38■□□□□ 0.21
HOXC11-201ENST00000243082 NPIPA3F8WFD2 350 aa16.38■□□□□ 0.21
HOXC11-201ENST00000243082 P2RY10O00398 339 aa16.38■□□□□ 0.21
HOXC11-201ENST00000243082 UBCP0CG48 685 aaKnown RBP16.38■□□□□ 0.21
HOXC11-201ENST00000243082 CD37P11049 281 aa16.38■□□□□ 0.21
HOXC11-201ENST00000243082 CNR1P21554 472 aa16.38■□□□□ 0.21
HOXC11-201ENST00000243082 CDK2P24941 298 aa16.38■□□□□ 0.21
HOXC11-201ENST00000243082 CD96P40200 585 aa16.38■□□□□ 0.21
HOXC11-201ENST00000243082 TATDN3Q17R31 274 aa16.38■□□□□ 0.21
HOXC11-201ENST00000243082 SPINK14Q6IE38 97 aa16.38■□□□□ 0.21
HOXC11-201ENST00000243082 JMJD6Q6NYC1 403 aaPredicted RBP16.38■□□□□ 0.21
HOXC11-201ENST00000243082 KLHL24Q6TFL4 600 aa16.38■□□□□ 0.21
HOXC11-201ENST00000243082 LINGO2Q7L985 606 aa16.38■□□□□ 0.21
HOXC11-201ENST00000243082 GGNQ86UU5 652 aa16.38■□□□□ 0.21
HOXC11-201ENST00000243082 OR51D1Q8NGF3 324 aa16.38■□□□□ 0.21
HOXC11-201ENST00000243082 KCNE4Q8WWG9 221 aa16.38■□□□□ 0.21
HOXC11-201ENST00000243082 DDX28Q9NUL7 540 aaKnown RBP16.38■□□□□ 0.21
HOXC11-201ENST00000243082 ASH2LQ9UBL3 628 aa16.38■□□□□ 0.21
HOXC11-201ENST00000243082 SLC17A2O00624 439 aa16.37■□□□□ 0.21
HOXC11-201ENST00000243082 LMX1BO60663 402 aa16.37■□□□□ 0.21
HOXC11-201ENST00000243082 TTRP02766 147 aa16.37■□□□□ 0.21
HOXC11-201ENST00000243082 ACSM4P0C7M7 580 aa16.37■□□□□ 0.21
HOXC11-201ENST00000243082 TRAPPC2P0DI81 140 aa16.37■□□□□ 0.21
HOXC11-201ENST00000243082 TRAPPC2BP0DI82 140 aa16.37■□□□□ 0.21
HOXC11-201ENST00000243082 TMIGD3P0DMS9 266 aaPredicted RBP16.37■□□□□ 0.21
HOXC11-201ENST00000243082 CSNK1A1P48729 337 aa16.37■□□□□ 0.21
HOXC11-201ENST00000243082 ZNF133P52736 654 aaPredicted RBP16.37■□□□□ 0.21
HOXC11-201ENST00000243082 RAC3P60763 192 aa16.37■□□□□ 0.21
HOXC11-201ENST00000243082 GABREP78334 506 aa16.37■□□□□ 0.21
HOXC11-201ENST00000243082 FOXO1Q12778 655 aa16.37■□□□□ 0.21
HOXC11-201ENST00000243082 TRIP6Q15654 476 aaKnown RBP16.37■□□□□ 0.21
HOXC11-201ENST00000243082 RHOUQ7L0Q8 258 aa16.37■□□□□ 0.21
HOXC11-201ENST00000243082 ELMOD2Q8IZ81 293 aa16.37■□□□□ 0.21
HOXC11-201ENST00000243082 TMEM123Q8N131 208 aa16.37■□□□□ 0.21
HOXC11-201ENST00000243082 PLPP7Q8NBV4 271 aa16.37■□□□□ 0.21
HOXC11-201ENST00000243082 GCDHQ92947 438 aaPredicted RBP16.37■□□□□ 0.21
HOXC11-201ENST00000243082 ST6GAL2Q96JF0 529 aa16.37■□□□□ 0.21
HOXC11-201ENST00000243082 PBOV1Q9GZY1 135 aa16.37■□□□□ 0.21
HOXC11-201ENST00000243082 PNRC2Q9NPJ4 139 aaKnown RBP16.37■□□□□ 0.21
HOXC11-201ENST00000243082 LRFN1Q9P244 771 aa16.37■□□□□ 0.21
HOXC11-201ENST00000243082 CKLFQ9UBR5 152 aa16.37■□□□□ 0.21
HOXC11-201ENST00000243082 IL17BQ9UHF5 180 aa16.37■□□□□ 0.21
HOXC11-201ENST00000243082 MRPS18CQ9Y3D5 142 aaKnown RBP16.37■□□□□ 0.21
HOXC11-201ENST00000243082 CACNA1HO95180 2353 aa16.37■□□□□ 0.21
HOXC11-201ENST00000243082 PHF3Q92576 2039 aaKnown RBP16.37■□□□□ 0.21
HOXC11-201ENST00000243082 ZNF878C9JN71 531 aa16.36■□□□□ 0.21
HOXC11-201ENST00000243082 SMAD9O15198 467 aaKnown RBP16.36■□□□□ 0.21
HOXC11-201ENST00000243082 RER1O15258 196 aa16.36■□□□□ 0.21
HOXC11-201ENST00000243082 DNPH1O43598 174 aa16.36■□□□□ 0.21
HOXC11-201ENST00000243082 SULT1B1O43704 296 aa16.36■□□□□ 0.21
HOXC11-201ENST00000243082 ORC5O43913 435 aa16.36■□□□□ 0.21
HOXC11-201ENST00000243082 NR2C1P13056 603 aa16.36■□□□□ 0.21
HOXC11-201ENST00000243082 HLA-DMAP28067 261 aa16.36■□□□□ 0.21
HOXC11-201ENST00000243082 MNDAP41218 407 aa16.36■□□□□ 0.21
HOXC11-201ENST00000243082 KLF9Q13886 244 aaPredicted RBP16.36■□□□□ 0.21
HOXC11-201ENST00000243082 DCAF10Q5QP82 559 aa16.36■□□□□ 0.21
HOXC11-201ENST00000243082 TMEM69Q5SWH9 247 aa16.36■□□□□ 0.21
HOXC11-201ENST00000243082 C10orf128Q5T292 105 aa16.36■□□□□ 0.21
HOXC11-201ENST00000243082 OR6N1Q8NGY5 312 aa16.36■□□□□ 0.21
HOXC11-201ENST00000243082 CREB3L1Q96BA8 519 aa16.36■□□□□ 0.21
HOXC11-201ENST00000243082 PLEKHA1Q9HB21 404 aa16.36■□□□□ 0.21
HOXC11-201ENST00000243082 ZFP64Q9NPA5 681 aa16.36■□□□□ 0.21
HOXC11-201ENST00000243082 NEURL1O76050 574 aa16.36■□□□□ 0.21
HOXC11-201ENST00000243082 WDPCPO95876 746 aa16.36■□□□□ 0.21
HOXC11-201ENST00000243082 GDNFP39905 211 aa16.36■□□□□ 0.21
HOXC11-201ENST00000243082 RAB11BQ15907 218 aa16.36■□□□□ 0.21
HOXC11-201ENST00000243082 WIPI1Q5MNZ9 446 aaPredicted RBP16.36■□□□□ 0.21
HOXC11-201ENST00000243082 PIP4P1Q86T03 277 aa16.36■□□□□ 0.21
HOXC11-201ENST00000243082 OR51A2Q8NGJ7 313 aa16.36■□□□□ 0.21
HOXC11-201ENST00000243082 OR52I2Q8NH67 350 aa16.36■□□□□ 0.21
HOXC11-201ENST00000243082 UBASH3BQ8TF42 649 aa16.36■□□□□ 0.21
HOXC11-201ENST00000243082 SLC7A6Q92536 515 aa16.36■□□□□ 0.21
HOXC11-201ENST00000243082 NKX3-1Q99801 234 aaPredicted RBP16.36■□□□□ 0.21
HOXC11-201ENST00000243082 FAM117AQ9C073 453 aa16.36■□□□□ 0.21
HOXC11-201ENST00000243082 NUFIP1Q9UHK0 495 aaKnown RBP16.36■□□□□ 0.21
HOXC11-201ENST00000243082 ALG5Q9Y673 324 aa16.36■□□□□ 0.21
HOXC11-201ENST00000243082 INMT-MINDY4F8WBC2 141 aa16.35■□□□□ 0.21
HOXC11-201ENST00000243082 GABARAPH6UMI1 98 aa16.35■□□□□ 0.21
HOXC11-201ENST00000243082 TRAPPC6AO75865 159 aa16.35■□□□□ 0.21
HOXC11-201ENST00000243082 POU3F4P49335 361 aa16.35■□□□□ 0.21
HOXC11-201ENST00000243082 STARP49675 285 aa16.35■□□□□ 0.21
HOXC11-201ENST00000243082 SELENOPP49908 381 aa16.35■□□□□ 0.21
HOXC11-201ENST00000243082 EFNB2P52799 333 aa16.35■□□□□ 0.21
HOXC11-201ENST00000243082 SUCLG1P53597 346 aaKnown RBP16.35■□□□□ 0.21
HOXC11-201ENST00000243082 C2orf76Q3KRA6 126 aa16.35■□□□□ 0.21
HOXC11-201ENST00000243082 ATAD3CQ5T2N8 411 aa16.35■□□□□ 0.21
HOXC11-201ENST00000243082 ZBTB8BQ8NAP8 495 aaPredicted RBP16.35■□□□□ 0.21
HOXC11-201ENST00000243082 SLC25A28Q96A46 364 aa16.35■□□□□ 0.21
HOXC11-201ENST00000243082 FAM3DQ96BQ1 224 aa16.35■□□□□ 0.21
HOXC11-201ENST00000243082 ADGRG7Q96K78 797 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms