RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 UEVLDQ8IX04 471 aa11.74□□□□□ -0.53
DDX39A-201ENST00000242776 CCDC36Q8IYA8 594 aa11.74□□□□□ -0.53
DDX39A-201ENST00000242776 CBR4Q8N4T8 237 aa11.74□□□□□ -0.53
DDX39A-201ENST00000242776 PACRGLQ8N7B6 248 aa11.74□□□□□ -0.53
DDX39A-201ENST00000242776 ANKK1Q8NFD2 765 aa11.74□□□□□ -0.53
DDX39A-201ENST00000242776 FGFBP3Q8TAT2 258 aa11.74□□□□□ -0.53
DDX39A-201ENST00000242776 FANK1Q8TC84 345 aa11.74□□□□□ -0.53
DDX39A-201ENST00000242776 TXNDC15Q96J42 360 aa11.74□□□□□ -0.53
DDX39A-201ENST00000242776 NIPSNAP1Q9BPW8 284 aa11.74□□□□□ -0.53
DDX39A-201ENST00000242776 PAPOLBQ9NRJ5 636 aaKnown RBP11.74□□□□□ -0.53
DDX39A-201ENST00000242776 UBAP1Q9NZ09 502 aa11.74□□□□□ -0.53
DDX39A-201ENST00000242776 ZNF224Q9NZL3 707 aa11.74□□□□□ -0.53
DDX39A-201ENST00000242776 OPN4Q9UHM6 478 aa11.74□□□□□ -0.53
DDX39A-201ENST00000242776 WIPI2Q9Y4P8 454 aa11.74□□□□□ -0.53
DDX39A-201ENST00000242776 IGHV1-69-2A0A0G2JMI3 117 aa11.73□□□□□ -0.53
DDX39A-201ENST00000242776 DNAJC9-AS1A6NH13 148 aa11.73□□□□□ -0.53
DDX39A-201ENST00000242776 C17orf100A8MU93 164 aa11.73□□□□□ -0.53
DDX39A-201ENST00000242776 SOCS2O14508 198 aa11.73□□□□□ -0.53
DDX39A-201ENST00000242776 CDC42EP2O14613 210 aa11.73□□□□□ -0.53
DDX39A-201ENST00000242776 TRAF3IP2O43734 574 aaPredicted RBP11.73□□□□□ -0.53
DDX39A-201ENST00000242776 AKAP8O43823 692 aaKnown RBP11.73□□□□□ -0.53
DDX39A-201ENST00000242776 IGHV2-5P01817 119 aa11.73□□□□□ -0.53
DDX39A-201ENST00000242776 DAPP51397 102 aa11.73□□□□□ -0.53
DDX39A-201ENST00000242776 LRRC36Q1X8D7 754 aa11.73□□□□□ -0.53
DDX39A-201ENST00000242776 LPCAT4Q643R3 524 aa11.73□□□□□ -0.53
DDX39A-201ENST00000242776 SMARCD3Q6STE5 483 aa11.73□□□□□ -0.53
DDX39A-201ENST00000242776 H1FNTQ75WM6 255 aaPredicted RBP11.73□□□□□ -0.53
DDX39A-201ENST00000242776 C20orf196Q8IYI0 205 aa11.73□□□□□ -0.53
DDX39A-201ENST00000242776 BCL6BQ8N143 479 aaPredicted RBP11.73□□□□□ -0.53
DDX39A-201ENST00000242776 CLDN22Q8N7P3 220 aa11.73□□□□□ -0.53
DDX39A-201ENST00000242776 OR52L1Q8NGH7 329 aa11.73□□□□□ -0.53
DDX39A-201ENST00000242776 OR13C2Q8NGS9 318 aa11.73□□□□□ -0.53
DDX39A-201ENST00000242776 OR6N1Q8NGY5 312 aa11.73□□□□□ -0.53
DDX39A-201ENST00000242776 SNX33Q8WV41 574 aa11.73□□□□□ -0.53
DDX39A-201ENST00000242776 GAL3ST1Q99999 423 aa11.73□□□□□ -0.53
DDX39A-201ENST00000242776 ULBP2Q9BZM5 246 aa11.73□□□□□ -0.53
DDX39A-201ENST00000242776 B3GAT2Q9NPZ5 323 aa11.73□□□□□ -0.53
DDX39A-201ENST00000242776 HINT3Q9NQE9 182 aaKnown RBP11.73□□□□□ -0.53
DDX39A-201ENST00000242776 ZNF346Q9UL40 294 aaKnown RBP11.73□□□□□ -0.53
DDX39A-201ENST00000242776 HIF3AQ9Y2N7 669 aa11.73□□□□□ -0.53
DDX39A-201ENST00000242776 TRAV27A0A087WT01 109 aa11.72□□□□□ -0.53
DDX39A-201ENST00000242776 A0A0G2JK05 382 aa11.72□□□□□ -0.53
DDX39A-201ENST00000242776 CLDN25C9JDP6 229 aa11.72□□□□□ -0.53
DDX39A-201ENST00000242776 BLOC1S5-TXNDC5H3BN57 136 aa11.72□□□□□ -0.53
DDX39A-201ENST00000242776 J3QLI3 93 aa11.72□□□□□ -0.53
DDX39A-201ENST00000242776 ALPLP05186 524 aa11.72□□□□□ -0.53
DDX39A-201ENST00000242776 LCKP06239 509 aa11.72□□□□□ -0.53
DDX39A-201ENST00000242776 ADORA3P0DMS8 318 aa11.72□□□□□ -0.53
DDX39A-201ENST00000242776 OSMP13725 252 aa11.72□□□□□ -0.53
DDX39A-201ENST00000242776 RBMXP38159 391 aaKnown RBP11.72□□□□□ -0.53
DDX39A-201ENST00000242776 MRPS11P82912 194 aaKnown RBP11.72□□□□□ -0.53
DDX39A-201ENST00000242776 PUDPQ08623 228 aa11.72□□□□□ -0.53
DDX39A-201ENST00000242776 SNCBQ16143 134 aa11.72□□□□□ -0.53
DDX39A-201ENST00000242776 ZNF620Q6ZNG0 422 aa11.72□□□□□ -0.53
DDX39A-201ENST00000242776 ZNF584Q8IVC4 421 aa11.72□□□□□ -0.53
DDX39A-201ENST00000242776 PARP8Q8N3A8 854 aa11.72□□□□□ -0.53
DDX39A-201ENST00000242776 PAQR4Q8N4S7 273 aaPredicted RBP11.72□□□□□ -0.53
DDX39A-201ENST00000242776 LRRC17Q8N6Y2 441 aa11.72□□□□□ -0.53
DDX39A-201ENST00000242776 OR51A7Q8NH64 312 aa11.72□□□□□ -0.53
DDX39A-201ENST00000242776 TEX47Q8TBZ9 253 aa11.72□□□□□ -0.53
DDX39A-201ENST00000242776 RDH12Q96NR8 316 aa11.72□□□□□ -0.53
DDX39A-201ENST00000242776 FOXB1Q99853 325 aa11.72□□□□□ -0.53
DDX39A-201ENST00000242776 SMURF2Q9HAU4 748 aa11.72□□□□□ -0.53
DDX39A-201ENST00000242776 DECR2Q9NUI1 292 aa11.72□□□□□ -0.53
DDX39A-201ENST00000242776 SIGLEC7Q9Y286 467 aa11.72□□□□□ -0.53
DDX39A-201ENST00000242776 CDH10Q9Y6N8 788 aa11.72□□□□□ -0.53
DDX39A-201ENST00000242776 PRKDCP78527 4128 aaKnown RBP11.72□□□□□ -0.53
DDX39A-201ENST00000242776 MS4A18H0YCH9 400 aa11.71□□□□□ -0.53
DDX39A-201ENST00000242776 H3BN98 237 aa11.71□□□□□ -0.53
DDX39A-201ENST00000242776 PLPP3O14495 311 aa11.71□□□□□ -0.53
DDX39A-201ENST00000242776 RNF13O43567 381 aa11.71□□□□□ -0.53
DDX39A-201ENST00000242776 NDUFB2O95178 105 aa11.71□□□□□ -0.53
DDX39A-201ENST00000242776 OMGP23515 440 aa11.71□□□□□ -0.53
DDX39A-201ENST00000242776 AHCYP23526 432 aa11.71□□□□□ -0.53
DDX39A-201ENST00000242776 SLC6A6P31641 620 aa11.71□□□□□ -0.53
DDX39A-201ENST00000242776 KLF3P57682 345 aaPredicted RBP11.71□□□□□ -0.53
DDX39A-201ENST00000242776 ESRRGP62508 458 aa11.71□□□□□ -0.53
DDX39A-201ENST00000242776 BAMBIQ13145 260 aa11.71□□□□□ -0.53
DDX39A-201ENST00000242776 MS4A18Q3C1V0 323 aa11.71□□□□□ -0.53
DDX39A-201ENST00000242776 ALG10Q5BKT4 473 aa11.71□□□□□ -0.53
DDX39A-201ENST00000242776 JAZF1Q86VZ6 243 aa11.71□□□□□ -0.53
DDX39A-201ENST00000242776 SKA3Q8IX90 412 aa11.71□□□□□ -0.53
DDX39A-201ENST00000242776 GALNT4Q8N4A0 578 aa11.71□□□□□ -0.53
DDX39A-201ENST00000242776 SYNPRQ8TBG9 265 aa11.71□□□□□ -0.53
DDX39A-201ENST00000242776 DVL3Q92997 716 aaPredicted RBP11.71□□□□□ -0.53
DDX39A-201ENST00000242776 GPA33Q99795 319 aa11.71□□□□□ -0.53
DDX39A-201ENST00000242776 SH3GL3Q99963 347 aa11.71□□□□□ -0.53
DDX39A-201ENST00000242776 OR52D1Q9H346 318 aa11.71□□□□□ -0.53
DDX39A-201ENST00000242776 RNF121Q9H920 327 aa11.71□□□□□ -0.53
DDX39A-201ENST00000242776 TBC1D23Q9NUY8 699 aa11.71□□□□□ -0.53
DDX39A-201ENST00000242776 ZNF69Q9UC07 566 aa11.71□□□□□ -0.53
DDX39A-201ENST00000242776 IGHV3OR16-10A0A075B7F0 116 aa11.7□□□□□ -0.54
DDX39A-201ENST00000242776 ZNF726A6NNF4 738 aa11.7□□□□□ -0.54
DDX39A-201ENST00000242776 C11orf98E9PRG8 122 aa11.7□□□□□ -0.54
DDX39A-201ENST00000242776 UBL3O95164 117 aa11.7□□□□□ -0.54
DDX39A-201ENST00000242776 SOX14O95416 240 aa11.7□□□□□ -0.54
DDX39A-201ENST00000242776 TSPAN19P0C672 248 aa11.7□□□□□ -0.54
DDX39A-201ENST00000242776 PRTN3P24158 256 aa11.7□□□□□ -0.54
DDX39A-201ENST00000242776 RPL4P36578 427 aaKnown RBP11.7□□□□□ -0.54
DDX39A-201ENST00000242776 VHLP40337 213 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms