RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 PLSCR5A0PG75 271 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 CCSO14618 274 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 HCRTR1O43613 425 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 FABP4P15090 132 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 RPL27P61353 136 aaKnown RBP7.52□□□□□ -1.21
APOB-201ENST00000233242 HYAL4Q2M3T9 481 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 H1FNTQ75WM6 255 aaPredicted RBP7.52□□□□□ -1.21
APOB-201ENST00000233242 TMEM25Q86YD3 366 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 SLC35G3Q8N808 338 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 TSACCQ96A04 125 aaPredicted RBP7.52□□□□□ -1.21
APOB-201ENST00000233242 TMED7Q9Y3B3 224 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 LTBP3Q9NS15 1303 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 G0S2P27469 103 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 RPS15P62841 145 aaKnown RBP7.52□□□□□ -1.21
APOB-201ENST00000233242 TCTEX1D1Q8N7M0 179 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 DLL4Q9NR61 685 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 A0A1W2PPQ1 181 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 TCRBV21S2A2A0A5A6 115 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 UBE2G1P62253 170 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 PNRC1Q12796 327 aaPredicted RBP7.52□□□□□ -1.21
APOB-201ENST00000233242 DUSP8Q13202 625 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 GPNMBQ14956 572 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 TOMM34Q15785 309 aaPredicted RBP7.52□□□□□ -1.21
APOB-201ENST00000233242 TMEM207Q6UWW9 146 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 TOMM20LQ6UXN7 152 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 SNRPNP63162 240 aaKnown RBP7.52□□□□□ -1.21
APOB-201ENST00000233242 ZMAT3Q9HA38 289 aaKnown RBP7.52□□□□□ -1.21
APOB-201ENST00000233242 VDAC3Q9Y277 283 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 PIGLQ9Y2B2 252 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 CLDN34H7C241 214 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 SPINT2O43291 252 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 HRH1P35367 487 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 ALKAL1Q6UXT8 129 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 C19orf53Q9UNZ5 99 aaPredicted RBP7.52□□□□□ -1.21
APOB-201ENST00000233242 TMEM218A2RU14 115 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 FAM166BA8MTA8 275 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 SLC6A1P30531 599 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 RGRP47804 291 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 ARSJQ5FYB0 599 aaPredicted RBP7.52□□□□□ -1.21
APOB-201ENST00000233242 SLC24A4Q8NFF2 622 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 UBR2Q8IWV8 1755 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 OR52A4PA6NMU1 304 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 PRAMEF26H0Y7S4 382 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 POU3F2P20265 443 aaPredicted RBP7.52□□□□□ -1.21
APOB-201ENST00000233242 YOD1Q5VVQ6 348 aaPredicted RBP7.52□□□□□ -1.21
APOB-201ENST00000233242 C1orf140Q5VVS0 124 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 SLC16A14Q7RTX9 510 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 CALHM3Q86XJ0 350 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 BVESQ8NE79 360 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 TMEM231Q9H6L2 316 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 CACNA1DQ01668 2161 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 CNMDO75829 334 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 CD3DP04234 171 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 RPL13AP40429 203 aaKnown RBP7.52□□□□□ -1.21
APOB-201ENST00000233242 PAQR6Q6TCH4 344 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 ZFP62Q8NB50 900 aaPredicted RBP7.52□□□□□ -1.21
APOB-201ENST00000233242 ESPL1Q14674 2120 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 A0A0A6YYC8 382 aaPredicted RBP7.52□□□□□ -1.21
APOB-201ENST00000233242 I3L1I5 382 aaPredicted RBP7.52□□□□□ -1.21
APOB-201ENST00000233242 SDHBP21912 280 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 SUB1P53999 127 aaKnown RBP eCLIP7.52□□□□□ -1.21
APOB-201ENST00000233242 ELLP55199 621 aaPredicted RBP7.52□□□□□ -1.21
APOB-201ENST00000233242 EEF1A1P68104 462 aaKnown RBP7.52□□□□□ -1.21
APOB-201ENST00000233242 RNF175Q8N4F7 328 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 RAB18Q9NP72 206 aa7.52□□□□□ -1.21
APOB-201ENST00000233242 HEYLQ9NQ87 328 aaPredicted RBP7.52□□□□□ -1.21
APOB-201ENST00000233242 OR5K3A6NET4 321 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 H7C1C5 153 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 RFC3P40938 356 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 HTR5AP47898 357 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 C17orf67Q0P5P2 114 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 CAPNS2Q96L46 248 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 APOOQ9BUR5 198 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 PARD6AQ9NPB6 346 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 SLC5A6Q9Y289 635 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 DCTDP32321 178 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 TMEM176BQ3YBM2 270 aaPredicted RBP7.51□□□□□ -1.21
APOB-201ENST00000233242 H2BFWTQ7Z2G1 175 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 HLA-CQ95604 372 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 FBXW5Q969U6 566 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 PAAF1Q9BRP4 392 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 TAS2R4Q9NYW5 299 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 FLVCR2Q9UPI3 526 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.51□□□□□ -1.21
APOB-201ENST00000233242 CEP250Q9BV73 2442 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 XKRY2A2RUG3 117 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 GFYI3L273 518 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 SSSCA1O60232 199 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 RD3LP0DJH9 198 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 SULT1A2P50226 295 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 LINC00303Q3SY05 128 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 GGNBP1Q5YKI7 109 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 TCTN3Q6NUS6 607 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 REEP6Q96HR9 211 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 TAAR2Q9P1P5 351 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 LRP3O75074 770 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 UTS2O95399 124 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 GSG1Q2KHT4 349 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 ABHD17BQ5VST6 288 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 DCXRQ7Z4W1 244 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms