RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 SWI5Q1ZZU3 235 aa12.57□□□□□ -0.4
SCNN1A-201ENST00000228916 OTPQ5XKR4 325 aa12.57□□□□□ -0.4
SCNN1A-201ENST00000228916 OR10K2Q6IF99 312 aa12.57□□□□□ -0.4
SCNN1A-201ENST00000228916 TBC1D3CQ6IPX1 549 aa12.57□□□□□ -0.4
SCNN1A-201ENST00000228916 TBC1D3Q8IZP1 549 aaPredicted RBP12.57□□□□□ -0.4
SCNN1A-201ENST00000228916 OR51A2Q8NGJ7 313 aa12.57□□□□□ -0.4
SCNN1A-201ENST00000228916 NRIP2Q9BQI9 281 aa12.57□□□□□ -0.4
SCNN1A-201ENST00000228916 TMEM231Q9H6L2 316 aa12.57□□□□□ -0.4
SCNN1A-201ENST00000228916 RNF122Q9H9V4 155 aa12.57□□□□□ -0.4
SCNN1A-201ENST00000228916 LOC390937A0A1W2PQ73 354 aa12.56□□□□□ -0.4
SCNN1A-201ENST00000228916 MEGF11A6BM72 1044 aa12.56□□□□□ -0.4
SCNN1A-201ENST00000228916 STK17BO94768 372 aa12.56□□□□□ -0.4
SCNN1A-201ENST00000228916 FOLR2P14207 255 aa12.56□□□□□ -0.4
SCNN1A-201ENST00000228916 CD226Q15762 336 aa12.56□□□□□ -0.4
SCNN1A-201ENST00000228916 ZNF260Q3ZCT1 412 aa12.56□□□□□ -0.4
SCNN1A-201ENST00000228916 C1orf100Q5SVJ3 147 aa12.56□□□□□ -0.4
SCNN1A-201ENST00000228916 NUP54Q7Z3B4 507 aa12.56□□□□□ -0.4
SCNN1A-201ENST00000228916 CATSPERDQ86XM0 798 aa12.56□□□□□ -0.4
SCNN1A-201ENST00000228916 LYPD6Q86Y78 171 aa12.56□□□□□ -0.4
SCNN1A-201ENST00000228916 GATSQ8NAP1 163 aa12.56□□□□□ -0.4
SCNN1A-201ENST00000228916 DCUN1D4Q92564 292 aa12.56□□□□□ -0.4
SCNN1A-201ENST00000228916 ZNF524Q96C55 264 aa12.56□□□□□ -0.4
SCNN1A-201ENST00000228916 RRNAD1Q96FB5 475 aaKnown RBP12.56□□□□□ -0.4
SCNN1A-201ENST00000228916 SLC25A44Q96H78 314 aaPredicted RBP12.56□□□□□ -0.4
SCNN1A-201ENST00000228916 ZNF304Q9HCX3 659 aa12.56□□□□□ -0.4
SCNN1A-201ENST00000228916 RCC2Q9P258 522 aaKnown RBP12.56□□□□□ -0.4
SCNN1A-201ENST00000228916 GTF2A1LQ9UNN4 478 aa12.56□□□□□ -0.4
SCNN1A-201ENST00000228916 RHBDD3Q9Y3P4 386 aa12.56□□□□□ -0.4
SCNN1A-201ENST00000228916 OR2T1O43869 369 aa12.56□□□□□ -0.4
SCNN1A-201ENST00000228916 ERCC1P07992 297 aaPredicted RBP12.56□□□□□ -0.4
SCNN1A-201ENST00000228916 NFYBP25208 207 aa12.56□□□□□ -0.4
SCNN1A-201ENST00000228916 ACTR1BP42025 376 aa12.56□□□□□ -0.4
SCNN1A-201ENST00000228916 GPR3P46089 330 aa12.56□□□□□ -0.4
SCNN1A-201ENST00000228916 ACTR1AP61163 376 aa12.56□□□□□ -0.4
SCNN1A-201ENST00000228916 SKP2Q13309 424 aa12.56□□□□□ -0.4
SCNN1A-201ENST00000228916 SLC18B1Q6NT16 456 aa12.56□□□□□ -0.4
SCNN1A-201ENST00000228916 KCTD9Q7L273 389 aa12.56□□□□□ -0.4
SCNN1A-201ENST00000228916 FJX1Q86VR8 437 aa12.56□□□□□ -0.4
SCNN1A-201ENST00000228916 ZFP82Q8N141 532 aa12.56□□□□□ -0.4
SCNN1A-201ENST00000228916 C16orf52Q8NHV5 167 aa12.56□□□□□ -0.4
SCNN1A-201ENST00000228916 CASTOR1Q8WTX7 329 aa12.56□□□□□ -0.4
SCNN1A-201ENST00000228916 PLA2G2FQ9BZM2 168 aa12.56□□□□□ -0.4
SCNN1A-201ENST00000228916 NMES1Q9C002 83 aa12.56□□□□□ -0.4
SCNN1A-201ENST00000228916 LOC100509620A0A075B734 347 aa12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 DCDC2BA2VCK2 349 aa12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 HCRTR1O43613 425 aa12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 RAB6AP20340 208 aa12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 GFOD2Q3B7J2 385 aa12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 CBLN3Q6UW01 205 aa12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 ZSCAN4Q8NAM6 433 aaPredicted RBP12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 ADAD2Q8NCV1 583 aaKnown RBP12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 OR9A4Q8NGU2 314 aa12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 C8orf44Q96CB5 159 aa12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 ELF4Q99607 663 aaPredicted RBP12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 KXD1Q9BQD3 176 aa12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 LPAR3Q9UBY5 353 aa12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 B9D1Q9UPM9 204 aa12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 COLCA2A8K830 154 aa12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 RAB27BO00194 218 aa12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 NAT2P11245 290 aa12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 VAMP1P23763 118 aa12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 PTGFRP43088 359 aa12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 SMAD2Q15796 467 aaKnown RBP12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 LINC00469Q8N7U9 141 aa12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 ACBD4Q8NC06 268 aa12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 ELP5Q8TE02 316 aa12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 TAAR8Q969N4 342 aa12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 MRPL22Q9NWU5 206 aaKnown RBP12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 GDF2Q9UK05 429 aaPredicted RBP12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 A0A0B4J2A0 478 aa12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 LINC01553A4QN01 128 aa12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 C5orf51A6NDU8 294 aa12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 GLAP06280 429 aa12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 PAX6P26367 422 aa12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 SERPINF1P36955 418 aa12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 SLC6A9P48067 706 aa12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 CX3CR1P49238 355 aa12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 CCR4P51679 360 aa12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 ZNF776Q68DI1 518 aaPredicted RBP12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 TRAPPC6BQ86SZ2 158 aa12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 GVQW1Q8N7I0 195 aa12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 FAM131CQ96AQ9 280 aa12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 ZC3H10Q96K80 434 aaKnown RBP12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 CDC6Q99741 560 aa12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 FN3KRPQ9HA64 309 aa12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 SHPKQ9UHJ6 478 aa12.55□□□□□ -0.4
SCNN1A-201ENST00000228916 KIF26BQ2KJY2 2108 aa12.54□□□□□ -0.4
SCNN1A-201ENST00000228916 LINC00587B1AMM8 73 aa12.54□□□□□ -0.4
SCNN1A-201ENST00000228916 H0YIZ8 118 aa12.54□□□□□ -0.4
SCNN1A-201ENST00000228916 K7EQS6 105 aa12.54□□□□□ -0.4
SCNN1A-201ENST00000228916 HLA-DQA2P01906 255 aa12.54□□□□□ -0.4
SCNN1A-201ENST00000228916 CTSBP07858 339 aa12.54□□□□□ -0.4
SCNN1A-201ENST00000228916 SMIM6P0DI80 62 aa12.54□□□□□ -0.4
SCNN1A-201ENST00000228916 IGLV3-21P80748 117 aaPredicted RBP12.54□□□□□ -0.4
SCNN1A-201ENST00000228916 HABP2Q14520 560 aaPredicted RBP12.54□□□□□ -0.4
SCNN1A-201ENST00000228916 MISPQ8IVT2 679 aa12.54□□□□□ -0.4
SCNN1A-201ENST00000228916 ARHGEF39Q8N4T4 335 aa12.54□□□□□ -0.4
SCNN1A-201ENST00000228916 JAGN1Q8N5M9 183 aa12.54□□□□□ -0.4
SCNN1A-201ENST00000228916 PATE1Q8WXA2 126 aa12.54□□□□□ -0.4
SCNN1A-201ENST00000228916 HOXC4P09017 264 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms