RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 REG4Q9BYZ8 158 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 TRBV2A0A0J9YWF9 115 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 A8MVM7 634 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 CREBL2O60519 120 aaPredicted RBP10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 WISP1O95388 367 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 DEFB109BQ30KR1 87 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 NHLRC3Q5JS37 347 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 RPL13AP3Q6NVV1 102 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 TMPRSS11FQ6ZWK6 438 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 TMPRSS7Q7RTY8 843 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 TMED4Q7Z7H5 227 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 ZNF417Q8TAU3 575 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 DVL3Q92997 716 aaPredicted RBP10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 TSSK2Q96PF2 358 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 ZNF587Q96SQ5 575 aaPredicted RBP10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 GTF2A1LQ9UNN4 478 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 AUP1Q9Y679 476 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 A0A0G2JK05 382 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 IMPA2O14732 288 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 AKR7A3O95154 331 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 RLN2P04090 185 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 FBXO45P0C2W1 286 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 EPXP11678 715 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 APEHP13798 732 aaKnown RBP10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 LIFP15018 202 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 HIST1H1CP16403 213 aaKnown RBP10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 NIPAL3Q6P499 406 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 TMUB2Q71RG4 321 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 PDZD9Q8IXQ8 264 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 TEAD3Q99594 435 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 ISYNA1Q9NPH2 558 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 A0A1W2PQD3 144 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 FAM166BA8MTA8 275 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 RAB40ALP0C0E4 278 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 TMIGD3P0DMS9 266 aaPredicted RBP10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 PTBP1P26599 531 aaKnown RBP eCLIP10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 GDI2P50395 445 aaKnown RBP10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 MLF1P58340 268 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 PRPS1P60891 318 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 Q0VFX4 171 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 ZNF169Q14929 603 aaPredicted RBP10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 C4orf46Q504U0 113 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 TMEM69Q5SWH9 247 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 FAM69AQ5T7M9 428 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 CARD17Q5XLA6 110 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 PTP4A1Q93096 173 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 DDIT4LQ96D03 193 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 SHARPINQ9H0F6 387 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 EVA1AQ9H8M9 152 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 MYEF2Q9P2K5 600 aaKnown RBP10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 ZNF346Q9UL40 294 aaKnown RBP10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 ZMIZ1Q9ULJ6 1067 aa10.5□□□□□ -0.73
TNFAIP1-201ENST00000226225 PIEZO2Q9H5I5 2752 aa10.49□□□□□ -0.73
TNFAIP1-201ENST00000226225 TRAV36DV7A0A075B6V5 113 aa10.49□□□□□ -0.73
TNFAIP1-201ENST00000226225 TMEM72A0PK05 275 aa10.49□□□□□ -0.73
TNFAIP1-201ENST00000226225 MCRIP1C9JLW8 97 aa10.49□□□□□ -0.73
TNFAIP1-201ENST00000226225 SULT2B1O00204 365 aa10.49□□□□□ -0.73
TNFAIP1-201ENST00000226225 KCNAB3O43448 404 aa10.49□□□□□ -0.73
TNFAIP1-201ENST00000226225 MST1P26927 711 aa10.49□□□□□ -0.73
TNFAIP1-201ENST00000226225 S100A11P31949 105 aa10.49□□□□□ -0.73
TNFAIP1-201ENST00000226225 RPL18Q07020 188 aaKnown RBP10.49□□□□□ -0.73
TNFAIP1-201ENST00000226225 PON3Q15166 354 aa10.49□□□□□ -0.73
TNFAIP1-201ENST00000226225 SGCBQ16585 318 aa10.49□□□□□ -0.73
TNFAIP1-201ENST00000226225 ZNF74Q16587 644 aa10.49□□□□□ -0.73
TNFAIP1-201ENST00000226225 RGS7BPQ6MZT1 257 aaPredicted RBP10.49□□□□□ -0.73
TNFAIP1-201ENST00000226225 HGDQ93099 445 aa10.49□□□□□ -0.73
TNFAIP1-201ENST00000226225 SGCZQ96LD1 299 aa10.49□□□□□ -0.73
TNFAIP1-201ENST00000226225 NOX4Q9NPH5 578 aa10.49□□□□□ -0.73
TNFAIP1-201ENST00000226225 EXOSC3Q9NQT5 275 aaKnown RBP10.49□□□□□ -0.73
TNFAIP1-201ENST00000226225 LHX6Q9UPM6 363 aa10.49□□□□□ -0.73
TNFAIP1-201ENST00000226225 IGF2RP11717 2491 aa10.49□□□□□ -0.73
TNFAIP1-201ENST00000226225 OR2T1O43869 369 aa10.49□□□□□ -0.73
TNFAIP1-201ENST00000226225 ATG12O94817 140 aa10.49□□□□□ -0.73
TNFAIP1-201ENST00000226225 IL11P20809 199 aa10.49□□□□□ -0.73
TNFAIP1-201ENST00000226225 STARP49675 285 aa10.49□□□□□ -0.73
TNFAIP1-201ENST00000226225 KLF9Q13886 244 aaPredicted RBP10.49□□□□□ -0.73
TNFAIP1-201ENST00000226225 DCAF12L2Q5VW00 463 aa10.49□□□□□ -0.73
TNFAIP1-201ENST00000226225 ARHGAP11AQ6P4F7 1023 aa10.49□□□□□ -0.73
TNFAIP1-201ENST00000226225 GSG1LQ6UXU4 331 aa10.49□□□□□ -0.73
TNFAIP1-201ENST00000226225 LINC00518Q8N0U6 118 aa10.49□□□□□ -0.73
TNFAIP1-201ENST00000226225 GALNT16Q8N428 558 aa10.49□□□□□ -0.73
TNFAIP1-201ENST00000226225 DNAJC13O75165 2243 aa10.49□□□□□ -0.73
TNFAIP1-201ENST00000226225 MED13Q9UHV7 2174 aa10.49□□□□□ -0.73
TNFAIP1-201ENST00000226225 ANKUB1A6NFN9 424 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 FAM25EA8MYX2 175 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 NPIPA5E9PKD4 350 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 LINC01387J3KSC0 135 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 ONECUT2O95948 504 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 IGHA1P01876 353 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 GLAP06280 429 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 CSRP1P21291 193 aaKnown RBP10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 POU3F1Q03052 451 aaPredicted RBP10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 SLC25A30Q5SVS4 291 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 METTL11BQ5VVY1 283 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 FCAMRQ8WWV6 532 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 C12orf57Q99622 126 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 TIMP4Q99727 224 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 EMC6Q9BV81 110 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 HES7Q9BYE0 225 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 TSPAN10Q9H1Z9 355 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms