RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 IL18R1Q13478 541 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 RAB35Q15286 201 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 TBC1D28Q2M2D7 210 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 ZNF691Q5VV52 312 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 SLC22A25Q6T423 547 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 CFAP77Q6ZQR2 320 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 CDC20BQ86Y33 519 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 KBTBD8Q8NFY9 601 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 OR1J2Q8NGS2 313 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 OR6N2Q8NGY6 317 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 RFKQ969G6 155 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 POM121L2Q96KW2 1035 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 HDHD2Q9H0R4 259 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 PLEK2Q9NYT0 353 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 DNAJC27Q9NZQ0 273 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 WARS2Q9UGM6 360 aaKnown RBP20.46■□□□□ 0.87
HOMER3-201ENST00000221222 CELSR1Q9NYQ6 3014 aa20.45■□□□□ 0.86
HOMER3-201ENST00000221222 RTTNQ86VV8 2226 aa20.45■□□□□ 0.86
HOMER3-201ENST00000221222 OR6C6A6NF89 314 aa20.45■□□□□ 0.86
HOMER3-201ENST00000221222 ATP6V1G2-DDX39BF2Z307 99 aa20.45■□□□□ 0.86
HOMER3-201ENST00000221222 APLNRP35414 380 aa20.45■□□□□ 0.86
HOMER3-201ENST00000221222 ELFN2Q5R3F8 820 aa20.45■□□□□ 0.86
HOMER3-201ENST00000221222 SHFQ7M4L6 423 aa20.45■□□□□ 0.86
HOMER3-201ENST00000221222 DPY19L4Q7Z388 723 aa20.45■□□□□ 0.86
HOMER3-201ENST00000221222 LILRB1Q8NHL6 650 aaPredicted RBP20.45■□□□□ 0.86
HOMER3-201ENST00000221222 MAP6Q96JE9 813 aa20.45■□□□□ 0.86
HOMER3-201ENST00000221222 LOC100509620A0A075B734 347 aa20.44■□□□□ 0.86
HOMER3-201ENST00000221222 SELENOFO60613 162 aa20.44■□□□□ 0.86
HOMER3-201ENST00000221222 CLIC3O95833 236 aa20.44■□□□□ 0.86
HOMER3-201ENST00000221222 ZNF672Q499Z4 452 aaPredicted RBP20.44■□□□□ 0.86
HOMER3-201ENST00000221222 SLC16A9Q7RTY1 509 aa20.44■□□□□ 0.86
HOMER3-201ENST00000221222 DCXRQ7Z4W1 244 aa20.44■□□□□ 0.86
HOMER3-201ENST00000221222 CDH24Q86UP0 819 aa20.44■□□□□ 0.86
HOMER3-201ENST00000221222 SETD9Q8NE22 299 aa20.44■□□□□ 0.86
HOMER3-201ENST00000221222 OR4F15Q8NGB8 312 aa20.44■□□□□ 0.86
HOMER3-201ENST00000221222 OR1F12Q8NHA8 337 aa20.44■□□□□ 0.86
HOMER3-201ENST00000221222 ST7LQ8TDW4 575 aa20.44■□□□□ 0.86
HOMER3-201ENST00000221222 TFAP2CQ92754 450 aa20.44■□□□□ 0.86
HOMER3-201ENST00000221222 COQ7Q99807 217 aa20.44■□□□□ 0.86
HOMER3-201ENST00000221222 PLEKHF2Q9H8W4 249 aa20.44■□□□□ 0.86
HOMER3-201ENST00000221222 PNRC2Q9NPJ4 139 aaKnown RBP20.44■□□□□ 0.86
HOMER3-201ENST00000221222 SPG11Q96JI7 2443 aa20.43■□□□□ 0.86
HOMER3-201ENST00000221222 ENTPD6O75354 484 aa20.43■□□□□ 0.86
HOMER3-201ENST00000221222 NAA10P41227 235 aaPredicted RBP20.43■□□□□ 0.86
HOMER3-201ENST00000221222 HTR5AP47898 357 aa20.43■□□□□ 0.86
HOMER3-201ENST00000221222 GDI2P50395 445 aaKnown RBP20.43■□□□□ 0.86
HOMER3-201ENST00000221222 PAQR4Q8N4S7 273 aaPredicted RBP20.43■□□□□ 0.86
HOMER3-201ENST00000221222 ZNF454Q8N9F8 522 aa20.43■□□□□ 0.86
HOMER3-201ENST00000221222 OTOSQ8NHW6 89 aa20.43■□□□□ 0.86
HOMER3-201ENST00000221222 CNN2Q99439 309 aaKnown RBP20.43■□□□□ 0.86
HOMER3-201ENST00000221222 YIPF3Q9GZM5 350 aa20.43■□□□□ 0.86
HOMER3-201ENST00000221222 CDH20Q9HBT6 801 aa20.43■□□□□ 0.86
HOMER3-201ENST00000221222 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.43■□□□□ 0.86
HOMER3-201ENST00000221222 HSPE1-MOB4S4R3N1 261 aa20.43■□□□□ 0.86
HOMER3-201ENST00000221222 CCL2P13500 99 aa20.42■□□□□ 0.86
HOMER3-201ENST00000221222 HGFACQ04756 655 aa20.42■□□□□ 0.86
HOMER3-201ENST00000221222 ECH1Q13011 328 aa20.42■□□□□ 0.86
HOMER3-201ENST00000221222 MAD2L1BPQ15013 274 aaPredicted RBP20.42■□□□□ 0.86
HOMER3-201ENST00000221222 USP51Q70EK9 711 aa20.42■□□□□ 0.86
HOMER3-201ENST00000221222 NUP37Q8NFH4 326 aa20.42■□□□□ 0.86
HOMER3-201ENST00000221222 OR10S1Q8NGN2 331 aa20.42■□□□□ 0.86
HOMER3-201ENST00000221222 APH1BQ8WW43 257 aa20.42■□□□□ 0.86
HOMER3-201ENST00000221222 AKAP1Q92667 903 aaKnown RBP eCLIP20.42■□□□□ 0.86
HOMER3-201ENST00000221222 NEUROG1Q92886 237 aa20.42■□□□□ 0.86
HOMER3-201ENST00000221222 Q96MT0 163 aa20.42■□□□□ 0.86
HOMER3-201ENST00000221222 ADGRL4Q9HBW9 690 aa20.42■□□□□ 0.86
HOMER3-201ENST00000221222 DDX28Q9NUL7 540 aaKnown RBP20.42■□□□□ 0.86
HOMER3-201ENST00000221222 CLN6Q9NWW5 311 aa20.42■□□□□ 0.86
HOMER3-201ENST00000221222 AASSQ9UDR5 926 aa20.42■□□□□ 0.86
HOMER3-201ENST00000221222 HIVEP1P15822 2718 aa20.42■□□□□ 0.86
HOMER3-201ENST00000221222 C5orf49A4QMS7 147 aa20.41■□□□□ 0.86
HOMER3-201ENST00000221222 SNTNA6NMZ2 147 aa20.41■□□□□ 0.86
HOMER3-201ENST00000221222 HS3ST1O14792 307 aa20.41■□□□□ 0.86
HOMER3-201ENST00000221222 ICMTO60725 284 aa20.41■□□□□ 0.86
HOMER3-201ENST00000221222 PCSK6P29122 969 aa20.41■□□□□ 0.86
HOMER3-201ENST00000221222 VHLP40337 213 aa20.41■□□□□ 0.86
HOMER3-201ENST00000221222 ISL1P61371 349 aa20.41■□□□□ 0.86
HOMER3-201ENST00000221222 NKX6-1P78426 367 aaPredicted RBP20.41■□□□□ 0.86
HOMER3-201ENST00000221222 IL5RAQ01344 420 aa20.41■□□□□ 0.86
HOMER3-201ENST00000221222 POU4F2Q12837 409 aa20.41■□□□□ 0.86
HOMER3-201ENST00000221222 EIF2B1Q14232 305 aaKnown RBP20.41■□□□□ 0.86
HOMER3-201ENST00000221222 TMEM154Q6P9G4 183 aa20.41■□□□□ 0.86
HOMER3-201ENST00000221222 IZUMO2Q6UXV1 221 aa20.41■□□□□ 0.86
HOMER3-201ENST00000221222 ATF6BQ99941 703 aa20.41■□□□□ 0.86
HOMER3-201ENST00000221222 ABHD6Q9BV23 337 aa20.41■□□□□ 0.86
HOMER3-201ENST00000221222 POU2F3Q9UKI9 436 aa20.41■□□□□ 0.86
HOMER3-201ENST00000221222 ATP23Q9Y6H3 246 aa20.41■□□□□ 0.86
HOMER3-201ENST00000221222 E7EQL1 145 aa20.4■□□□□ 0.86
HOMER3-201ENST00000221222 MRPL3P09001 348 aaKnown RBP20.4■□□□□ 0.86
HOMER3-201ENST00000221222 GNAO1P09471 354 aa20.4■□□□□ 0.86
HOMER3-201ENST00000221222 SBK2P0C263 348 aa20.4■□□□□ 0.86
HOMER3-201ENST00000221222 NR4A1P22736 598 aa20.4■□□□□ 0.86
HOMER3-201ENST00000221222 GALK2Q01415 458 aa20.4■□□□□ 0.86
HOMER3-201ENST00000221222 KRTAP27-1Q3LI81 207 aa20.4■□□□□ 0.86
HOMER3-201ENST00000221222 RHOUQ7L0Q8 258 aa20.4■□□□□ 0.86
HOMER3-201ENST00000221222 SLAMF6Q96DU3 332 aa20.4■□□□□ 0.86
HOMER3-201ENST00000221222 CISD1Q9NZ45 108 aaKnown RBP20.4■□□□□ 0.86
HOMER3-201ENST00000221222 SPEF1Q9Y4P9 236 aa20.4■□□□□ 0.86
HOMER3-201ENST00000221222 WBP4O75554 376 aaKnown RBP20.39■□□□□ 0.85
HOMER3-201ENST00000221222 LYNP07948 512 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms