RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 EFNA3P52797 238 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 RPS27AP62979 156 aaKnown RBP15.47■□□□□ 0.07
USB1-201ENST00000219281 UBA52P62987 128 aaKnown RBP15.47■□□□□ 0.07
USB1-201ENST00000219281 NKPD1Q17RQ9 610 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 PRAMEF17Q5VTA0 474 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 ACBD4Q8NC06 268 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 OR5M8Q8NGP6 311 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 OR13C8Q8NGS7 320 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 EDAQ92838 391 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 SLC25A32Q9H2D1 315 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 TMEM185BQ9H7F4 350 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 DHCR7Q9UBM7 475 aaKnown RBP15.47■□□□□ 0.07
USB1-201ENST00000219281 HHLA2Q9UM44 414 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 R4GMQ9 66 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 IGKV3D-11A0A0A0MRZ8 115 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 LOC107986453A0A1B0GWG9 222 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 ATP6V1G2-DDX39BF2Z307 99 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 LDLRAD4O15165 306 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 SRSF10O75494 262 aaKnown RBP15.47■□□□□ 0.07
USB1-201ENST00000219281 CD74P04233 296 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 GLO1Q04760 184 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 TAF13Q15543 124 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 LRRC37A5PQ49AS3 106 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 CORO6Q6QEF8 472 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 CD163Q86VB7 1156 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 PRSS58Q8IYP2 241 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 LMX1AQ8TE12 382 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 SEC22AQ96IW7 307 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 PDCD10Q9BUL8 212 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 SLCO5A1Q9H2Y9 848 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 LDAHQ9H6V9 325 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 ZC4H2Q9NQZ6 224 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 NOP16Q9Y3C1 178 aaKnown RBP15.47■□□□□ 0.07
USB1-201ENST00000219281 ABCA7Q8IZY2 2146 aa15.46■□□□□ 0.07
USB1-201ENST00000219281 LOC100509620A0A075B734 347 aa15.46■□□□□ 0.07
USB1-201ENST00000219281 A0A0D9SG52 128 aa15.46■□□□□ 0.07
USB1-201ENST00000219281 A0A1B0GTI1 187 aa15.46■□□□□ 0.07
USB1-201ENST00000219281 A0A1W2PQD3 144 aa15.46■□□□□ 0.07
USB1-201ENST00000219281 A8MVM7 634 aa15.46■□□□□ 0.07
USB1-201ENST00000219281 CD8AP01732 235 aa15.46■□□□□ 0.07
USB1-201ENST00000219281 APOC3P02656 99 aa15.46■□□□□ 0.07
USB1-201ENST00000219281 CD37P11049 281 aa15.46■□□□□ 0.07
USB1-201ENST00000219281 NME1P15531 152 aaKnown RBP15.46■□□□□ 0.07
USB1-201ENST00000219281 IL11P20809 199 aa15.46■□□□□ 0.07
USB1-201ENST00000219281 CD27P26842 260 aa15.46■□□□□ 0.07
USB1-201ENST00000219281 CD38P28907 300 aa15.46■□□□□ 0.07
USB1-201ENST00000219281 ATRAIDQ6UW56 229 aa15.46■□□□□ 0.07
USB1-201ENST00000219281 LINC00346Q8IVM7 164 aa15.46■□□□□ 0.07
USB1-201ENST00000219281 OR4D6Q8NGJ1 314 aa15.46■□□□□ 0.07
USB1-201ENST00000219281 OR10K1Q8NGX5 313 aa15.46■□□□□ 0.07
USB1-201ENST00000219281 EDEM2Q9BV94 578 aa15.46■□□□□ 0.07
USB1-201ENST00000219281 WDR13Q9H1Z4 485 aa15.46■□□□□ 0.07
USB1-201ENST00000219281 MYOZ1Q9NP98 299 aaPredicted RBP15.46■□□□□ 0.07
USB1-201ENST00000219281 G6PC2Q9NQR9 355 aa15.46■□□□□ 0.07
USB1-201ENST00000219281 TRIOBPQ9H2D6 2365 aa15.46■□□□□ 0.07
USB1-201ENST00000219281 LOC101059948A0A1B0GTJ6 334 aa15.46■□□□□ 0.06
USB1-201ENST00000219281 MEGF11A6BM72 1044 aa15.46■□□□□ 0.06
USB1-201ENST00000219281 TLCD2A6NGC4 264 aa15.46■□□□□ 0.06
USB1-201ENST00000219281 SOX1O00570 391 aaPredicted RBP15.46■□□□□ 0.06
USB1-201ENST00000219281 SIGLEC5O15389 551 aa15.46■□□□□ 0.06
USB1-201ENST00000219281 HLA-AP01891 365 aaKnown RBP15.46■□□□□ 0.06
USB1-201ENST00000219281 CRABP1P29762 137 aa15.46■□□□□ 0.06
USB1-201ENST00000219281 DCAF7P61962 342 aa15.46■□□□□ 0.06
USB1-201ENST00000219281 FGL1Q08830 312 aa15.46■□□□□ 0.06
USB1-201ENST00000219281 SIGLEC14Q08ET2 396 aa15.46■□□□□ 0.06
USB1-201ENST00000219281 ELAVL1Q15717 326 aaKnown RBP15.46■□□□□ 0.06
USB1-201ENST00000219281 SMAD2Q15796 467 aaKnown RBP15.46■□□□□ 0.06
USB1-201ENST00000219281 BEX5Q5H9J7 111 aa15.46■□□□□ 0.06
USB1-201ENST00000219281 FAM122CQ6P4D5 195 aa15.46■□□□□ 0.06
USB1-201ENST00000219281 PAPD4Q6PIY7 484 aaKnown RBP15.46■□□□□ 0.06
USB1-201ENST00000219281 DCXRQ7Z4W1 244 aa15.46■□□□□ 0.06
USB1-201ENST00000219281 ZNF584Q8IVC4 421 aa15.46■□□□□ 0.06
USB1-201ENST00000219281 OR52H1Q8NGJ2 320 aa15.46■□□□□ 0.06
USB1-201ENST00000219281 ZBTB8AQ96BR9 441 aa15.46■□□□□ 0.06
USB1-201ENST00000219281 FOXQ1Q9C009 403 aa15.46■□□□□ 0.06
USB1-201ENST00000219281 CHRDQ9H2X0 955 aa15.46■□□□□ 0.06
USB1-201ENST00000219281 GPN3Q9UHW5 284 aaPredicted RBP15.46■□□□□ 0.06
USB1-201ENST00000219281 OR52A1Q9UKL2 312 aa15.46■□□□□ 0.06
USB1-201ENST00000219281 VSIG4Q9Y279 399 aa15.46■□□□□ 0.06
USB1-201ENST00000219281 ZNF823P16415 610 aa15.45■□□□□ 0.06
USB1-201ENST00000219281 ARRB1P49407 418 aaPredicted RBP15.45■□□□□ 0.06
USB1-201ENST00000219281 FMODQ06828 376 aa15.45■□□□□ 0.06
USB1-201ENST00000219281 CDNFQ49AH0 187 aa15.45■□□□□ 0.06
USB1-201ENST00000219281 VWA2Q5GFL6 755 aa15.45■□□□□ 0.06
USB1-201ENST00000219281 LIN54Q6MZP7 749 aa15.45■□□□□ 0.06
USB1-201ENST00000219281 JMJD6Q6NYC1 403 aaPredicted RBP15.45■□□□□ 0.06
USB1-201ENST00000219281 GPR119Q8TDV5 335 aa15.45■□□□□ 0.06
USB1-201ENST00000219281 WWTR1Q9GZV5 400 aa15.45■□□□□ 0.06
USB1-201ENST00000219281 RASL12Q9NYN1 266 aa15.45■□□□□ 0.06
USB1-201ENST00000219281 SDK1Q7Z5N4 2213 aa15.45■□□□□ 0.06
USB1-201ENST00000219281 DISC1C4P0D8 188 aa15.45■□□□□ 0.06
USB1-201ENST00000219281 P2RY10O00398 339 aa15.45■□□□□ 0.06
USB1-201ENST00000219281 TSPAN9O75954 239 aa15.45■□□□□ 0.06
USB1-201ENST00000219281 AHSA1O95433 338 aa15.45■□□□□ 0.06
USB1-201ENST00000219281 IGHMP01871 453 aa15.45■□□□□ 0.06
USB1-201ENST00000219281 ABCD3P28288 659 aa15.45■□□□□ 0.06
USB1-201ENST00000219281 LUMP51884 338 aaPredicted RBP15.45■□□□□ 0.06
USB1-201ENST00000219281 ATXN7L3Q14CW9 347 aaPredicted RBP15.45■□□□□ 0.06
USB1-201ENST00000219281 ZMYND11Q15326 602 aa15.45■□□□□ 0.06
USB1-201ENST00000219281 ELOCQ15369 112 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms