RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 CDC6Q99741 560 aa11.13□□□□□ -0.63
TM9SF4-201ENST00000217315 SLC25A21Q9BQT8 299 aaPredicted RBP11.13□□□□□ -0.63
TM9SF4-201ENST00000217315 CHRDQ9H2X0 955 aa11.13□□□□□ -0.63
TM9SF4-201ENST00000217315 ACKR4Q9NPB9 350 aa11.13□□□□□ -0.63
TM9SF4-201ENST00000217315 SLC39A1Q9NY26 324 aa11.13□□□□□ -0.63
TM9SF4-201ENST00000217315 TAS2R5Q9NYW4 299 aa11.13□□□□□ -0.63
TM9SF4-201ENST00000217315 B3GALT5Q9Y2C3 310 aa11.13□□□□□ -0.63
TM9SF4-201ENST00000217315 R4GMQ9 66 aa11.13□□□□□ -0.63
TM9SF4-201ENST00000217315 SLC22A23A1A5C7 686 aa11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 OR4C45A6NMZ5 311 aa11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 GLSO94925 669 aaPredicted RBP11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 QDPRP09417 244 aa11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 BCKDHBP21953 392 aa11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 EXOSC2Q13868 293 aaKnown RBP11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 PLA1AQ53H76 456 aa11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 EIF5AL1Q6IS14 154 aaKnown RBP11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 GUSBP11Q6P575 273 aa11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 TMEM71Q6P5X7 295 aa11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 GLIPR1L1Q6UWM5 242 aa11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 NLRC3Q7RTR2 1065 aa11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 STK35Q8TDR2 534 aa11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 EXOSC3Q9NQT5 275 aaKnown RBP11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 RAB22AQ9UL26 194 aa11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 SLC7A11Q9UPY5 501 aa11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 RGS13O14921 159 aa11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 ZNF254O75437 659 aa11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 ADRB1P08588 477 aa11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 GIPP09681 153 aaPredicted RBP11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 MSX1P28360 303 aa11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 S100GP29377 79 aa11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 GLP1RP43220 463 aa11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 RPS15P62841 145 aaKnown RBP11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 PDSS1Q5T2R2 415 aa11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 ARSKQ6UWY0 536 aa11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 RHOUQ7L0Q8 258 aa11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 RABEPKQ7Z6M1 372 aa11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 OR1J4Q8NGS1 313 aa11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 DOCK8Q8NF50 2099 aa11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 STK17BO94768 372 aa11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 IL9P15248 144 aa11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 CDAP32320 146 aa11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 HERV-K104P61576 105 aa11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 ZBTB37Q5TC79 503 aa11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 LCN10Q6JVE6 187 aa11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 RHBDD1Q8TEB9 315 aa11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 UBL7Q96S82 380 aaPredicted RBP11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 SLCO5A1Q9H2Y9 848 aa11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 KCNIP3Q9Y2W7 256 aa11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 TMEM184BQ9Y519 407 aaPredicted RBP11.12□□□□□ -0.63
TM9SF4-201ENST00000217315 TGFBR3LH3BV60 316 aa11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 PMP2P02689 132 aa11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 TMIGD3P0DMS9 266 aaPredicted RBP11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 NAGAP17050 411 aa11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 MAP2K6P52564 334 aa11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 FXYD4P59646 89 aa11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 SLC35A1P78382 337 aa11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 CLVS2Q5SYC1 327 aa11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 C9orf40Q8IXQ3 194 aa11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 OR11H7Q8NGC8 314 aa11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 RNF128Q8TEB7 428 aa11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 C11orf40Q8WZ69 217 aa11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 ZNF442Q9H7R0 627 aa11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 TPRP12270 2363 aaKnown RBP11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 HOXB5P09067 269 aa11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 BLVRBP30043 206 aaPredicted RBP11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 GAS1P54826 345 aa11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 FAM199XQ6PEV8 388 aaPredicted RBP11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 KMT5CQ86Y97 462 aa11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 OR2AK2Q8NG84 335 aa11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 OR10G3Q8NGC4 313 aa11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 KCNG3Q8TAE7 436 aa11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 FLVCR1-AS1Q8TAF5 88 aa11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 BORCS8Q96FH0 119 aa11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 EHFQ9NZC4 300 aa11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 SLC5A6Q9Y289 635 aa11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 MTCH2Q9Y6C9 303 aa11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 TP53BP1Q12888 1972 aaPredicted RBP11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 EP300Q09472 2414 aaPredicted RBP11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 SPTBN2O15020 2390 aa11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 FCGR2AP12318 317 aa11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 PPP3CBP16298 524 aa11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 LAP3P28838 519 aa11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 SEC61A1P61619 476 aaKnown RBP11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 ISXQ2M1V0 245 aa11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 C9orf135Q5VTT2 229 aa11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 TEX261Q6UWH6 196 aa11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 GTPBP8Q8N3Z3 284 aaPredicted RBP11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 OR1M1Q8NGA1 313 aa11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 OR4S1Q8NGB4 309 aa11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 GPR84Q9NQS5 396 aa11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 U3KQ87 197 aa11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 KIF26BQ2KJY2 2108 aa11.11□□□□□ -0.63
TM9SF4-201ENST00000217315 PLXND1Q9Y4D7 1925 aa11.1□□□□□ -0.63
TM9SF4-201ENST00000217315 PMS2P2O95744 297 aa11.1□□□□□ -0.63
TM9SF4-201ENST00000217315 EIF1P41567 113 aaKnown RBP11.1□□□□□ -0.63
TM9SF4-201ENST00000217315 SSR4P51571 173 aa11.1□□□□□ -0.63
TM9SF4-201ENST00000217315 CEBPGP53567 150 aa11.1□□□□□ -0.63
TM9SF4-201ENST00000217315 PER3P56645 1201 aa11.1□□□□□ -0.63
TM9SF4-201ENST00000217315 CCL7P80098 99 aa11.1□□□□□ -0.63
TM9SF4-201ENST00000217315 EFNB1P98172 346 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms