RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Cavin3Q91VJ2 260 aa10.36□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Slc52a3Q9D6X5 460 aa10.36□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Kiaa0141Q9DCV6 510 aa10.36□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Prr14lE9Q7C4 1971 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Kntc1Q8C3Y4 2207 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Phf3B2RQG2 2025 aaKnown RBP10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Rnf39A2RT81 352 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 CK137956B1AYM9 596 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Vmn1r5B2RQT2 315 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Vmn1r94K7N6X3 305 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Dok2O70469 412 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Fli1P26323 452 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Gpr160Q3U3F9 336 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Sidt1Q6AXF6 827 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Znf2Q8BIQ3 427 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Neu4Q8BZL1 478 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Lrg1Q91XL1 342 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Cdca3Q99M54 266 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Armc10Q9D0L7 306 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Dmac2Q9D7K5 258 aaKnown RBP10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Sec61a2Q9JLR1 476 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Slc39a1Q9QZ03 324 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Gk2Q9WU65 554 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Klhl15A2AAX3 604 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Olfr547E9PXN3 311 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Olfr373E9Q4J3 314 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 TertO70372 1122 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Msx1P13297 303 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Gstm3P19639 218 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Map2k6P70236 334 aaKnown RBP10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 BglapP86546 95 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Bglap2P86547 95 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Olfr372Q7TRY2 314 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Rspo2Q8BFU0 243 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 OacylQ8BML2 685 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 CenpoQ8K015 298 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Sla2Q8R4L0 259 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Tmem242Q8VCR3 140 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Ndufb2Q9CPU2 105 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Tomm34Q9CYG7 309 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Tex33Q9D9J2 266 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Lhx6Q9R1R0 363 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Scnn1gQ9WU39 655 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Obp1bA2AEP0 171 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Ggta1l1A2AUQ7 319 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Gpr155A2AWR3 868 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Gm14743A2BHD2 171 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Trabd2bB1ATG9 517 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Vmn2r42O35192 852 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 P01809 118 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 H2-Eb2Q3UUV9 287 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Wfdc5Q4KXB6 126 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 TrmoQ562D6 431 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Frg2f1Q6P3A2 227 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Prss43Q76HL1 382 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Flrt3Q8BGT1 649 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Olfm2Q8BM13 448 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 9230110F15RikQ9D262 117 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 C1galt1c1Q9JMG2 316 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Gm5475D3YV11 175 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Gm20390E9PZF0 267 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Ccl26F8VQM2 93 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Hoxb5P09079 269 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Zfp13P10754 512 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Nme2Q01768 152 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Tfb2mQ3TL26 396 aaKnown RBP10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Mettl7a2Q5I0W6 244 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Olfr884Q7TRE1 309 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Olfr776Q7TRI3 312 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 4922502D21RikQ8C634 189 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Alg12Q8VDB2 486 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Teddm3Q9CQH1 294 aa10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Ndufa6Q9CQZ5 131 aaKnown RBP10.35□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Plxna1P70206 1894 aa10.34□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Olfr65A0A1B0GSF4 315 aa10.34□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Zfp707F6QUN2 391 aa10.34□□□□□ -0.75
Topbp1-201ENSMUST00000035164 ArsbP50429 534 aa10.34□□□□□ -0.75
Topbp1-201ENSMUST00000035164 SnrpnP63163 240 aaKnown RBP10.34□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Alg11Q3TZM9 492 aa10.34□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Shisa3Q3UPR0 238 aa10.34□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Mboat1Q8BH98 492 aa10.34□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Clec2fQ8VI21 196 aa10.34□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Hebp2Q9WU63 205 aa10.34□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Scn10aQ6QIY3 1958 aa10.34□□□□□ -0.75
Topbp1-201ENSMUST00000035164 LexmA2AVQ5 414 aa10.34□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Gm21767J3QPV5 180 aa10.34□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Cbfa2t3O54972 620 aa10.34□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Csf1P07141 552 aa10.34□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Gja4P28235 333 aa10.34□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Wnt11P48615 354 aa10.34□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Arf3P61205 181 aa10.34□□□□□ -0.75
Topbp1-201ENSMUST00000035164 HfeP70387 359 aa10.34□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Riiad1Q3KNY5 119 aa10.34□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Ankrd53Q3V0J4 497 aa10.34□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Bloc1s3Q5U5M8 195 aa10.34□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Cxcl17Q5UW37 119 aa10.34□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Tfap2eQ6VUP9 442 aa10.34□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Calm5Q6W3E0 140 aa10.34□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Muc20Q8BUE7 656 aa10.34□□□□□ -0.75
Topbp1-201ENSMUST00000035164 Foxj3Q8BUR3 623 aa10.34□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms