RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 C9orf40Q8IXQ3 194 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 PDZD9Q8IXQ8 264 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 OR4S1Q8NGB4 309 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 OR1J2Q8NGS2 313 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 FAM174AQ8TBP5 190 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 RBM14Q96PK6 669 aaKnown RBP12.41□□□□□ -0.42
PHGDH-233ENST00000642021 CMKLR1Q99788 373 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 SLC17A5Q9NRA2 495 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 CD207Q9UJ71 328 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 FARSAQ9Y285 508 aaKnown RBP12.41□□□□□ -0.42
PHGDH-233ENST00000642021 COA3Q9Y2R0 106 aaPredicted RBP12.41□□□□□ -0.42
PHGDH-233ENST00000642021 SESN1Q9Y6P5 492 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 FREM3P0C091 2139 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 LOC101059948A0A1B0GTJ6 334 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 FITM1A5D6W6 292 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 WIPF3A6NGB9 483 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 KRBOX1C9JBD0 128 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 HPP00738 406 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 CSN2P05814 226 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 IL11P20809 199 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 TAS2R19P59542 299 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 RIPPLY1Q0D2K3 151 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 SGCBQ16585 318 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 FAM74A1Q5RGS3 127 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 MAMDC2Q7Z304 686 aaPredicted RBP12.41□□□□□ -0.42
PHGDH-233ENST00000642021 RLN3Q8WXF3 142 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 ASB17Q8WXJ9 295 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 INTS12Q96CB8 462 aaKnown RBP12.41□□□□□ -0.42
PHGDH-233ENST00000642021 DHCR7Q9UBM7 475 aaKnown RBP12.41□□□□□ -0.42
PHGDH-233ENST00000642021 H0YIG0 161 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 YKT6O15498 198 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 SDC3O75056 442 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 NPIPB7O75200 414 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 PMS2P2O95744 297 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 MELTFP08582 738 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 ACTBP60709 375 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 ACTG1P63261 375 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 GLT8D1Q68CQ7 371 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 ARSKQ6UWY0 536 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 TFAP2EQ6VUC0 442 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 ZNF546Q86UE3 836 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 PRSS58Q8IYP2 241 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 TMEM229BQ8NBD8 167 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 OR13C8Q8NGS7 320 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 NPAS1Q99742 590 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 SLC6A7Q99884 636 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 TXNIPQ9H3M7 391 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 FANCFQ9NPI8 374 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 VSX1Q9NZR4 365 aaPredicted RBP12.41□□□□□ -0.42
PHGDH-233ENST00000642021 MSRAQ9UJ68 235 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 MMP17Q9ULZ9 603 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 EMC9Q9Y3B6 208 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 TMEM235A6NFC5 223 aa12.4□□□□□ -0.42
PHGDH-233ENST00000642021 SHISA7A6NL88 538 aa12.4□□□□□ -0.42
PHGDH-233ENST00000642021 SLC25A12O75746 678 aa12.4□□□□□ -0.42
PHGDH-233ENST00000642021 DXOO77932 396 aaKnown RBP12.4□□□□□ -0.42
PHGDH-233ENST00000642021 AQP8O94778 261 aa12.4□□□□□ -0.42
PHGDH-233ENST00000642021 S100A6P06703 90 aa12.4□□□□□ -0.42
PHGDH-233ENST00000642021 SLC6A8P48029 635 aa12.4□□□□□ -0.42
PHGDH-233ENST00000642021 RIDAP52758 137 aaKnown RBP12.4□□□□□ -0.42
PHGDH-233ENST00000642021 EBPQ15125 230 aaKnown RBP12.4□□□□□ -0.42
PHGDH-233ENST00000642021 SCGB2B2Q4G0G5 96 aa12.4□□□□□ -0.42
PHGDH-233ENST00000642021 Q6ZS52 159 aa12.4□□□□□ -0.42
PHGDH-233ENST00000642021 JAGN1Q8N5M9 183 aa12.4□□□□□ -0.42
PHGDH-233ENST00000642021 STEAP2Q8NFT2 490 aa12.4□□□□□ -0.42
PHGDH-233ENST00000642021 KLHDC7BQ96G42 594 aa12.4□□□□□ -0.42
PHGDH-233ENST00000642021 SLC38A3Q99624 504 aa12.4□□□□□ -0.42
PHGDH-233ENST00000642021 DPYSL5Q9BPU6 564 aa12.4□□□□□ -0.42
PHGDH-233ENST00000642021 PELOQ9BRX2 385 aaKnown RBP12.4□□□□□ -0.42
PHGDH-233ENST00000642021 KLK13Q9UKR3 277 aa12.4□□□□□ -0.42
PHGDH-233ENST00000642021 BRWD1Q9NSI6 2320 aa12.4□□□□□ -0.42
PHGDH-233ENST00000642021 NUP210LQ5VU65 1888 aa12.4□□□□□ -0.42
PHGDH-233ENST00000642021 TMEM131Q92545 1883 aa12.4□□□□□ -0.42
PHGDH-233ENST00000642021 IGKV3D-11A0A0A0MRZ8 115 aa12.4□□□□□ -0.43
PHGDH-233ENST00000642021 TTLL8A6PVC2 850 aa12.4□□□□□ -0.43
PHGDH-233ENST00000642021 CCSO14618 274 aa12.4□□□□□ -0.43
PHGDH-233ENST00000642021 LDLRAD4O15165 306 aa12.4□□□□□ -0.43
PHGDH-233ENST00000642021 TSPAN2O60636 221 aa12.4□□□□□ -0.43
PHGDH-233ENST00000642021 SRSF10O75494 262 aaKnown RBP12.4□□□□□ -0.43
PHGDH-233ENST00000642021 IL12BP29460 328 aa12.4□□□□□ -0.43
PHGDH-233ENST00000642021 PMPCAQ10713 525 aa12.4□□□□□ -0.43
PHGDH-233ENST00000642021 DHRS2Q13268 280 aa12.4□□□□□ -0.43
PHGDH-233ENST00000642021 ZNF273Q14593 569 aa12.4□□□□□ -0.43
PHGDH-233ENST00000642021 NKPD1Q17RQ9 610 aa12.4□□□□□ -0.43
PHGDH-233ENST00000642021 VWA2Q5GFL6 755 aa12.4□□□□□ -0.43
PHGDH-233ENST00000642021 LRFN4Q6PJG9 635 aa12.4□□□□□ -0.43
PHGDH-233ENST00000642021 HSD17B13Q7Z5P4 300 aaPredicted RBP12.4□□□□□ -0.43
PHGDH-233ENST00000642021 DEFB119Q8N690 84 aa12.4□□□□□ -0.43
PHGDH-233ENST00000642021 OR4D6Q8NGJ1 314 aa12.4□□□□□ -0.43
PHGDH-233ENST00000642021 MRPS24Q96EL2 167 aaKnown RBP12.4□□□□□ -0.43
PHGDH-233ENST00000642021 SEC22AQ96IW7 307 aa12.4□□□□□ -0.43
PHGDH-233ENST00000642021 ZNF587Q96SQ5 575 aaPredicted RBP12.4□□□□□ -0.43
PHGDH-233ENST00000642021 POTEKPQ9BYX7 375 aa12.4□□□□□ -0.43
PHGDH-233ENST00000642021 WBP1LQ9NX94 342 aa12.4□□□□□ -0.43
PHGDH-233ENST00000642021 TMED7-TICAM2A0A0A6YYA0 188 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 TMEM150CB9EJG8 249 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 ALG1L2C9J202 215 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 D6RAR5 112 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 LINC01387J3KSC0 135 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 EIF4E2O60573 245 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms