RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 MRPL28Q13084 256 aaKnown RBP11.57□□□□□ -0.56
PHGDH-221ENST00000641573 LSAMPQ13449 338 aa11.57□□□□□ -0.56
PHGDH-221ENST00000641573 CDK5R1Q15078 307 aa11.57□□□□□ -0.56
PHGDH-221ENST00000641573 KCNMB1Q16558 191 aa11.57□□□□□ -0.56
PHGDH-221ENST00000641573 PLEKHN1Q494U1 663 aaPredicted RBP11.57□□□□□ -0.56
PHGDH-221ENST00000641573 CCDC58Q4VC31 144 aa11.57□□□□□ -0.56
PHGDH-221ENST00000641573 LIPNQ5VXI9 398 aa11.57□□□□□ -0.56
PHGDH-221ENST00000641573 RPUSD3Q6P087 351 aaKnown RBP11.57□□□□□ -0.56
PHGDH-221ENST00000641573 KCTD18Q6PI47 426 aaPredicted RBP11.57□□□□□ -0.56
PHGDH-221ENST00000641573 SPATC1Q76KD6 591 aa11.57□□□□□ -0.56
PHGDH-221ENST00000641573 LINC00346Q8IVM7 164 aa11.57□□□□□ -0.56
PHGDH-221ENST00000641573 CDADC1Q9BWV3 514 aa11.57□□□□□ -0.56
PHGDH-221ENST00000641573 PRDM14Q9GZV8 571 aa11.57□□□□□ -0.56
PHGDH-221ENST00000641573 RNF122Q9H9V4 155 aa11.57□□□□□ -0.56
PHGDH-221ENST00000641573 ELOVL3Q9HB03 270 aa11.57□□□□□ -0.56
PHGDH-221ENST00000641573 B3GAT2Q9NPZ5 323 aa11.57□□□□□ -0.56
PHGDH-221ENST00000641573 POLE4Q9NR33 117 aa11.57□□□□□ -0.56
PHGDH-221ENST00000641573 TXNL4BQ9NX01 149 aaKnown RBP11.57□□□□□ -0.56
PHGDH-221ENST00000641573 ERRFI1Q9UJM3 462 aaPredicted RBP11.57□□□□□ -0.56
PHGDH-221ENST00000641573 B3GNT3Q9Y2A9 372 aa11.57□□□□□ -0.56
PHGDH-221ENST00000641573 NOSIPQ9Y314 301 aaKnown RBP11.57□□□□□ -0.56
PHGDH-221ENST00000641573 TNRC6AQ8NDV7 1962 aaKnown RBP11.57□□□□□ -0.56
PHGDH-221ENST00000641573 HSPB2A8KAH6 182 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 ZNF724A8MTY0 619 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 GRNP28799 593 aaKnown RBP11.56□□□□□ -0.56
PHGDH-221ENST00000641573 GDI2P50395 445 aaKnown RBP11.56□□□□□ -0.56
PHGDH-221ENST00000641573 ZNF84P51523 738 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 TUBA1BP68363 451 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 ROM1Q03395 351 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 RNPS1Q15287 305 aaKnown RBP11.56□□□□□ -0.56
PHGDH-221ENST00000641573 TRAM1Q15629 374 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 HSPB2Q16082 182 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 INAQ16352 499 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 SGCAQ16586 387 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 C22orf42Q6IC83 251 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 CD200R1LQ6Q8B3 271 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 LRRN1Q6UXK5 716 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 FOXL2NBQ6ZUU3 175 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 TUBA1AQ71U36 451 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 DCXRQ7Z4W1 244 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 KRT77Q7Z794 578 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 MCEMP1Q8IX19 187 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 TUSC5Q8IXB3 177 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 ZNF679Q8IYX0 411 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 GPR137CQ8N3F9 429 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 OR52N5Q8NH56 324 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 DYNC2LI1Q8TCX1 351 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 HAVCR2Q8TDQ0 301 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 ST7LQ8TDW4 575 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 RNF166Q96A37 237 aaPredicted RBP11.56□□□□□ -0.56
PHGDH-221ENST00000641573 SARAFQ96BY9 339 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 PGLYRP3Q96LB9 341 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 COQ7Q99807 217 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 RBM24Q9BX46 236 aaKnown RBP11.56□□□□□ -0.56
PHGDH-221ENST00000641573 HDHD5Q9BXW7 423 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 MROQ9BYG7 248 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 CXorf56Q9H5V9 222 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 CALHM2Q9HA72 323 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 BCO1Q9HAY6 547 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 PLSCR2Q9NRY7 297 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 PARPBPQ9NWS1 579 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 CYB5R1Q9UHQ9 305 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 CLEC4AQ9UMR7 237 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 SLC5A6Q9Y289 635 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 POLR1DQ9Y2S0 133 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 ZNF175Q9Y473 711 aa11.56□□□□□ -0.56
PHGDH-221ENST00000641573 F8P00451 2351 aa11.55□□□□□ -0.56
PHGDH-221ENST00000641573 TRBV2A0A0J9YWF9 115 aa11.55□□□□□ -0.56
PHGDH-221ENST00000641573 CD8B2A6NJW9 211 aa11.55□□□□□ -0.56
PHGDH-221ENST00000641573 SLC22A20A6NK97 555 aa11.55□□□□□ -0.56
PHGDH-221ENST00000641573 GABRPO00591 440 aa11.55□□□□□ -0.56
PHGDH-221ENST00000641573 MRPL33O75394 65 aaKnown RBP11.55□□□□□ -0.56
PHGDH-221ENST00000641573 RGS9O75916 674 aaPredicted RBP11.55□□□□□ -0.56
PHGDH-221ENST00000641573 WNT11O96014 354 aa11.55□□□□□ -0.56
PHGDH-221ENST00000641573 CD1AP06126 327 aa11.55□□□□□ -0.56
PHGDH-221ENST00000641573 YES1P07947 543 aa11.55□□□□□ -0.56
PHGDH-221ENST00000641573 CD8BP10966 210 aa11.55□□□□□ -0.56
PHGDH-221ENST00000641573 FGF9P31371 208 aaPredicted RBP11.55□□□□□ -0.56
PHGDH-221ENST00000641573 GUCA1AP43080 201 aaPredicted RBP11.55□□□□□ -0.56
PHGDH-221ENST00000641573 SH3BGRP55822 239 aaPredicted RBP11.55□□□□□ -0.56
PHGDH-221ENST00000641573 NANOS3P60323 173 aaKnown RBP11.55□□□□□ -0.56
PHGDH-221ENST00000641573 DGUOKQ16854 277 aa11.55□□□□□ -0.56
PHGDH-221ENST00000641573 CORO6Q6QEF8 472 aa11.55□□□□□ -0.56
PHGDH-221ENST00000641573 TMEM91Q6ZNR0 172 aa11.55□□□□□ -0.56
PHGDH-221ENST00000641573 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.55□□□□□ -0.56
PHGDH-221ENST00000641573 OR2AJ1Q8NGZ0 328 aa11.55□□□□□ -0.56
PHGDH-221ENST00000641573 ABHD4Q8TB40 342 aa11.55□□□□□ -0.56
PHGDH-221ENST00000641573 HTRA1Q92743 480 aa11.55□□□□□ -0.56
PHGDH-221ENST00000641573 GHSRQ92847 366 aa11.55□□□□□ -0.56
PHGDH-221ENST00000641573 MARVELD3Q96A59 401 aa11.55□□□□□ -0.56
PHGDH-221ENST00000641573 SMIM19Q96E16 107 aa11.55□□□□□ -0.56
PHGDH-221ENST00000641573 DCLRE1CQ96SD1 692 aaKnown RBP11.55□□□□□ -0.56
PHGDH-221ENST00000641573 C1orf198Q9H425 327 aa11.55□□□□□ -0.56
PHGDH-221ENST00000641573 GSTK1Q9Y2Q3 226 aa11.55□□□□□ -0.56
PHGDH-221ENST00000641573 LHFPL6Q9Y693 200 aa11.55□□□□□ -0.56
PHGDH-221ENST00000641573 SHANK1Q9Y566 2161 aa11.54□□□□□ -0.56
PHGDH-221ENST00000641573 APCP25054 2843 aa11.54□□□□□ -0.56
PHGDH-221ENST00000641573 A0A1B0GTH9 108 aa11.54□□□□□ -0.56
PHGDH-221ENST00000641573 ZNHIT1O43257 154 aa11.54□□□□□ -0.56
PHGDH-221ENST00000641573 ZNF254O75437 659 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms