RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	LINC00032	P0C843	101 aa		5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	DANCR	P0C864	163 aa		5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	BCKDHA	P12694	445 aa		5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	CD99	P14209	185 aa		5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	NCF2	P19878	526 aa	Predicted RBP	5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	PRPS1L1	P21108	318 aa		5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	TBXA2R	P21731	343 aa		5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	PAICS	P22234	425 aa	Known RBP	5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	ELK4	P28324	431 aa		5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	CD79B	P40259	229 aa		5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	CDKN1B	P46527	198 aa		5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	STAR	P49675	285 aa		5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	SRSF4	Q08170	494 aa	Known RBP	5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	SIGIRR	Q6IA17	410 aa		5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	MFSD12	Q6NUT3	480 aa		5.47	□□□□□ -1.53
CASC19-238	ENST00000641523		Q6ZSR9	355 aa		5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	MTERF4	Q7Z6M4	381 aa	Known RBP	5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	PATL1	Q86TB9	770 aa	Known RBP	5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	MARCH3	Q86UD3	253 aa		5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	TGIF2LY	Q8IUE0	185 aa		5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	UBQLNL	Q8IYU4	475 aa		5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	OFCC1	Q8IZS5	231 aa		5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	TRIML2	Q8N7C3	387 aa		5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	BBS10	Q8TAM1	723 aa		5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	RAB3IL1	Q8TBN0	382 aa		5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	TMEM163	Q8TC26	289 aa		5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	COQ8B	Q96D53	544 aa		5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	SLC41A3	Q96GZ6	507 aa		5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	C4orf36	Q96KX1	117 aa		5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	TSSK3	Q96PN8	268 aa		5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	MED18	Q9BUE0	208 aa		5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	PINK1	Q9BXM7	581 aa		5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	PRRG4	Q9BZD6	226 aa		5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	RNF122	Q9H9V4	155 aa		5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	TIGAR	Q9NQ88	270 aa		5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	MED11	Q9P086	117 aa		5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	FAF1	Q9UNN5	650 aa	Predicted RBP	5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	PROCR	Q9UNN8	238 aa		5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	FIS1	Q9Y3D6	152 aa		5.47	□□□□□ -1.53
CASC19-238	ENST00000641523	HRNR	Q86YZ3	2850 aa	Predicted RBP	5.47	□□□□□ -1.53
CASC19-238	ENST00000641523		A0A1W2PRB8	838 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	ZNF879	B4DU55	563 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	HSBP1L1	C9JCN9	74 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	C16orf97	H3BN30	126 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	ARHGEF9	O43307	516 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	RAD51D	O75771	328 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	SYNGR4	O95473	234 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	OXSR1	O95747	527 aa	Predicted RBP	5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	TGM6	O95932	706 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	S100A6	P06703	90 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	POU2F1	P14859	743 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	ZNF3	P17036	446 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	MAP3K8	P41279	467 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	SLC1A3	P43003	542 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	ENTPD1	P49961	510 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	CTBP2	P56545	445 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	CLDN15	P56746	228 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	PDK3	Q15120	406 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	PON3	Q15166	354 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	PNLIPRP3	Q17RR3	467 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	DEFB113	Q30KQ7	82 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	ODF3L2	Q3SX64	289 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	FAM174B	Q3ZCQ3	159 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	RFTN2	Q52LD8	501 aa	Predicted RBP	5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	XKR7	Q5GH72	579 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	CPTP	Q5TA50	214 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	ZNF367	Q7RTV3	350 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	NRARP	Q7Z6K4	114 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	CROCCP2	Q86T23	111 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	PRIMA1	Q86XR5	153 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	MED12L	Q86YW9	2145 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	C1orf87	Q8N0U7	546 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	ARFGAP2	Q8N6H7	521 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	FNDC5	Q8NAU1	212 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	BPIFC	Q8NFQ6	507 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	OR6K3	Q8NGY3	331 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	SFXN5	Q8TD22	340 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	OR5P2	Q8WZ92	322 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	PIGT	Q969N2	578 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	CIDEC	Q96AQ7	238 aa	Predicted RBP	5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	STARD4	Q96DR4	205 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	CHMP6	Q96FZ7	201 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	GMPPA	Q96IJ6	420 aa	Predicted RBP	5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	MRPL37	Q9BZE1	423 aa	Known RBP	5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	PKIB	Q9C010	78 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	PIGU	Q9H490	435 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	TUBB1	Q9H4B7	451 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	PPP1R3E	Q9H7J1	279 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	FN3KRP	Q9HA64	309 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	KLHL9	Q9P2J3	617 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	VDAC3	Q9Y277	283 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	ZNF337	Q9Y3M9	751 aa		5.46	□□□□□ -1.53
CASC19-238	ENST00000641523	AKR7A2	O43488	359 aa		5.46	□□□□□ -1.54
CASC19-238	ENST00000641523	KCNK2	O95069	426 aa		5.46	□□□□□ -1.54
CASC19-238	ENST00000641523	OR6A2	O95222	327 aa		5.46	□□□□□ -1.54
CASC19-238	ENST00000641523	CSTA	P01040	98 aa		5.46	□□□□□ -1.54
CASC19-238	ENST00000641523	HMGN2	P05204	90 aa	Known RBP	5.46	□□□□□ -1.54
CASC19-238	ENST00000641523	CHRNG	P07510	517 aa		5.46	□□□□□ -1.54
CASC19-238	ENST00000641523	OR8G3P	P0DMU2	310 aa		5.46	□□□□□ -1.54

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms