RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 RAF1P04049 648 aa14.59□□□□□ -0.07
PHGDH-216ENST00000641375 STARP49675 285 aa14.59□□□□□ -0.07
PHGDH-216ENST00000641375 KCNMB1Q16558 191 aa14.59□□□□□ -0.07
PHGDH-216ENST00000641375 WDR38Q5JTN6 314 aa14.59□□□□□ -0.07
PHGDH-216ENST00000641375 LRFN4Q6PJG9 635 aa14.59□□□□□ -0.07
PHGDH-216ENST00000641375 SPATC1Q76KD6 591 aa14.59□□□□□ -0.07
PHGDH-216ENST00000641375 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.59□□□□□ -0.07
PHGDH-216ENST00000641375 SNX29P2Q8IUI4 249 aa14.59□□□□□ -0.07
PHGDH-216ENST00000641375 RNF133Q8WVZ7 376 aa14.59□□□□□ -0.07
PHGDH-216ENST00000641375 TMEM54Q969K7 222 aa14.59□□□□□ -0.07
PHGDH-216ENST00000641375 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.59□□□□□ -0.07
PHGDH-216ENST00000641375 ABCB10Q9NRK6 738 aa14.59□□□□□ -0.07
PHGDH-216ENST00000641375 FABP12A6NFH5 140 aa14.58□□□□□ -0.07
PHGDH-216ENST00000641375 GPR171O14626 319 aa14.58□□□□□ -0.07
PHGDH-216ENST00000641375 PDCD5O14737 125 aa14.58□□□□□ -0.07
PHGDH-216ENST00000641375 CXCL13O43927 109 aa14.58□□□□□ -0.07
PHGDH-216ENST00000641375 SLC19A2O60779 497 aa14.58□□□□□ -0.07
PHGDH-216ENST00000641375 RFC3P40938 356 aa14.58□□□□□ -0.07
PHGDH-216ENST00000641375 MAGEA5P43359 124 aa14.58□□□□□ -0.07
PHGDH-216ENST00000641375 MEOX1P50221 254 aa14.58□□□□□ -0.07
PHGDH-216ENST00000641375 ZNF133P52736 654 aaPredicted RBP14.58□□□□□ -0.07
PHGDH-216ENST00000641375 C10orf128Q5T292 105 aa14.58□□□□□ -0.07
PHGDH-216ENST00000641375 RHOUQ7L0Q8 258 aa14.58□□□□□ -0.07
PHGDH-216ENST00000641375 ASCL5Q7RTU5 278 aa14.58□□□□□ -0.07
PHGDH-216ENST00000641375 TMEM123Q8N131 208 aa14.58□□□□□ -0.07
PHGDH-216ENST00000641375 OR2AJ1Q8NGZ0 328 aa14.58□□□□□ -0.07
PHGDH-216ENST00000641375 ZNF552Q9H707 407 aaPredicted RBP14.58□□□□□ -0.07
PHGDH-216ENST00000641375 POLR1DQ9Y2S0 133 aa14.58□□□□□ -0.07
PHGDH-216ENST00000641375 R4GMQ9 66 aa14.58□□□□□ -0.07
PHGDH-216ENST00000641375 A0A0G2JK05 382 aa14.58□□□□□ -0.08
PHGDH-216ENST00000641375 A0A1B0GTH9 108 aa14.58□□□□□ -0.08
PHGDH-216ENST00000641375 ACOD1A6NK06 481 aa14.58□□□□□ -0.08
PHGDH-216ENST00000641375 GLSO94925 669 aaPredicted RBP14.58□□□□□ -0.08
PHGDH-216ENST00000641375 H2BFMP0C1H6 154 aa14.58□□□□□ -0.08
PHGDH-216ENST00000641375 OR10A3P58181 314 aa14.58□□□□□ -0.08
PHGDH-216ENST00000641375 FAM131AQ6UXB0 335 aa14.58□□□□□ -0.08
PHGDH-216ENST00000641375 LYSMD2Q8IV50 215 aa14.58□□□□□ -0.08
PHGDH-216ENST00000641375 TMEM251Q8N6I4 163 aa14.58□□□□□ -0.08
PHGDH-216ENST00000641375 ZIC4Q8N9L1 334 aa14.58□□□□□ -0.08
PHGDH-216ENST00000641375 TMEM178AQ8NBL3 297 aa14.58□□□□□ -0.08
PHGDH-216ENST00000641375 SLITRK2Q9H156 845 aa14.58□□□□□ -0.08
PHGDH-216ENST00000641375 ZCCHC4Q9H5U6 513 aa14.58□□□□□ -0.08
PHGDH-216ENST00000641375 RCE1Q9Y256 329 aa14.58□□□□□ -0.08
PHGDH-216ENST00000641375 GVINP1Q7Z2Y8 2422 aa14.58□□□□□ -0.08
PHGDH-216ENST00000641375 FAM166BA8MTA8 275 aa14.57□□□□□ -0.08
PHGDH-216ENST00000641375 TMEM127O75204 238 aa14.57□□□□□ -0.08
PHGDH-216ENST00000641375 DCTDP32321 178 aa14.57□□□□□ -0.08
PHGDH-216ENST00000641375 KIR3DL2P43630 455 aa14.57□□□□□ -0.08
PHGDH-216ENST00000641375 ABLIM2Q6H8Q1 611 aa14.57□□□□□ -0.08
PHGDH-216ENST00000641375 XKRXQ6PP77 449 aa14.57□□□□□ -0.08
PHGDH-216ENST00000641375 CORO6Q6QEF8 472 aa14.57□□□□□ -0.08
PHGDH-216ENST00000641375 METAP1DQ6UB28 335 aaPredicted RBP14.57□□□□□ -0.08
PHGDH-216ENST00000641375 SLC22A16Q86VW1 577 aa14.57□□□□□ -0.08
PHGDH-216ENST00000641375 CATSPERDQ86XM0 798 aa14.57□□□□□ -0.08
PHGDH-216ENST00000641375 ZFP62Q8NB50 900 aaPredicted RBP14.57□□□□□ -0.08
PHGDH-216ENST00000641375 SUN5Q8TC36 379 aa14.57□□□□□ -0.08
PHGDH-216ENST00000641375 SLAMF6Q96DU3 332 aa14.57□□□□□ -0.08
PHGDH-216ENST00000641375 SCMH1Q96GD3 660 aa14.57□□□□□ -0.08
PHGDH-216ENST00000641375 GTF2A1LQ9UNN4 478 aa14.57□□□□□ -0.08
PHGDH-216ENST00000641375 FLVCR1Q9Y5Y0 555 aa14.57□□□□□ -0.08
PHGDH-216ENST00000641375 ZNF716A6NP11 495 aa14.57□□□□□ -0.08
PHGDH-216ENST00000641375 PIN1P1O15428 100 aa14.57□□□□□ -0.08
PHGDH-216ENST00000641375 HPGDSO60760 199 aa14.57□□□□□ -0.08
PHGDH-216ENST00000641375 ALX3O95076 343 aa14.57□□□□□ -0.08
PHGDH-216ENST00000641375 WNT11O96014 354 aa14.57□□□□□ -0.08
PHGDH-216ENST00000641375 PNPP00491 289 aa14.57□□□□□ -0.08
PHGDH-216ENST00000641375 LHX2P50458 406 aa14.57□□□□□ -0.08
PHGDH-216ENST00000641375 CLDN15P56746 228 aa14.57□□□□□ -0.08
PHGDH-216ENST00000641375 SRSF6Q13247 344 aaKnown RBP14.57□□□□□ -0.08
PHGDH-216ENST00000641375 ZNF766Q5HY98 468 aa14.57□□□□□ -0.08
PHGDH-216ENST00000641375 ANGPTL6Q8NI99 470 aa14.57□□□□□ -0.08
PHGDH-216ENST00000641375 TCF7L1Q9HCS4 588 aa14.57□□□□□ -0.08
PHGDH-216ENST00000641375 POLE4Q9NR33 117 aa14.57□□□□□ -0.08
PHGDH-216ENST00000641375 CENPMQ9NSP4 180 aa14.57□□□□□ -0.08
PHGDH-216ENST00000641375 FOXD3Q9UJU5 478 aaPredicted RBP14.57□□□□□ -0.08
PHGDH-216ENST00000641375 GDF2Q9UK05 429 aaPredicted RBP14.57□□□□□ -0.08
PHGDH-216ENST00000641375 LHFPL6Q9Y693 200 aa14.57□□□□□ -0.08
PHGDH-216ENST00000641375 FAM186AA6NE01 2351 aa14.56□□□□□ -0.08
PHGDH-216ENST00000641375 ANKRD61A6NGH8 418 aa14.56□□□□□ -0.08
PHGDH-216ENST00000641375 SRSF10O75494 262 aaKnown RBP14.56□□□□□ -0.08
PHGDH-216ENST00000641375 TPPPO94811 219 aa14.56□□□□□ -0.08
PHGDH-216ENST00000641375 CELA3AP09093 270 aa14.56□□□□□ -0.08
PHGDH-216ENST00000641375 EPXP11678 715 aa14.56□□□□□ -0.08
PHGDH-216ENST00000641375 PTBP1P26599 531 aaKnown RBP eCLIP14.56□□□□□ -0.08
PHGDH-216ENST00000641375 CDAP32320 146 aa14.56□□□□□ -0.08
PHGDH-216ENST00000641375 THBS2P35442 1172 aa14.56□□□□□ -0.08
PHGDH-216ENST00000641375 EVX1P49640 407 aa14.56□□□□□ -0.08
PHGDH-216ENST00000641375 SELENOPP49908 381 aa14.56□□□□□ -0.08
PHGDH-216ENST00000641375 LSM6P62312 80 aaKnown RBP14.56□□□□□ -0.08
PHGDH-216ENST00000641375 PPIAP62937 165 aaKnown RBP14.56□□□□□ -0.08
PHGDH-216ENST00000641375 ZNF79Q15937 498 aa14.56□□□□□ -0.08
PHGDH-216ENST00000641375 CEP78Q5JTW2 689 aa14.56□□□□□ -0.08
PHGDH-216ENST00000641375 STEAP3Q658P3 488 aa14.56□□□□□ -0.08
PHGDH-216ENST00000641375 FCRLAQ7L513 359 aa14.56□□□□□ -0.08
PHGDH-216ENST00000641375 TMEM106AQ96A25 262 aa14.56□□□□□ -0.08
PHGDH-216ENST00000641375 NELFAQ9H3P2 528 aa14.56□□□□□ -0.08
PHGDH-216ENST00000641375 EMC7Q9NPA0 242 aa14.56□□□□□ -0.08
PHGDH-216ENST00000641375 PAQR5Q9NXK6 330 aaPredicted RBP14.56□□□□□ -0.08
PHGDH-216ENST00000641375 ABRACLQ9P1F3 81 aa14.56□□□□□ -0.08
PHGDH-216ENST00000641375 PHF3Q92576 2039 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms