RNA–Protein interactions for RNA: ENST00000640313.1

VPS35-212, Transcript of VPS35, retromer complex component, humanhuman

TSL 5 BASIC

Gene VPS35, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35-212ENST00000640313 AQP8O94778 261 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 GLSO94925 669 aaPredicted RBP0.09□□□□□ -2.4
VPS35-212ENST00000640313 H6PDO95479 791 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 OXTP01178 125 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 IGLV2-8P01709 118 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 IGHV3-11P01762 117 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 IGHDP01880 384 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 HLA-DQB1P01920 261 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 GLAP06280 429 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 CRYGBP07316 175 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 HEXBP07686 556 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 CTSLP07711 333 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 KRT13P13646 458 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 CD99P14209 185 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 CCNB1P14635 433 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 ETS2P15036 469 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 NTF3P20783 257 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 ATP6V1C1P21283 382 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 KITLGP21583 273 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 ME2P23368 584 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 DTYMKP23919 212 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 AK4P27144 223 aaPredicted RBP0.09□□□□□ -2.4
VPS35-212ENST00000640313 BMI1P35226 326 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 ATP6V1E1P36543 226 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 CEACAM6P40199 344 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 NSG1P42857 185 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 CRYBB2P43320 205 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 MAGEA8P43361 318 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 SYKP43405 635 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 IDH2P48735 452 aaKnown RBP0.09□□□□□ -2.4
VPS35-212ENST00000640313 CX3CR1P49238 355 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 PRLHRP49683 370 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 SSR4P51571 173 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 CRISP1P54107 249 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 UGT2B15P54855 530 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 CMC4P56277 68 aaPredicted RBP0.09□□□□□ -2.4
VPS35-212ENST00000640313 SYNJ2BPP57105 145 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 TAS2R31P59538 309 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 PLP1P60201 277 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 KRTAP10-4P60372 401 aaPredicted RBP0.09□□□□□ -2.4
VPS35-212ENST00000640313 PPP1CBP62140 327 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 RPS11P62280 158 aaKnown RBP eCLIP0.09□□□□□ -2.4
VPS35-212ENST00000640313 ACTG2P63267 376 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 CDK5Q00535 292 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 SIGLEC14Q08ET2 396 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 FUT5Q11128 374 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 CDH17Q12864 832 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 IL24Q13007 206 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 MRPL28Q13084 256 aaKnown RBP0.09□□□□□ -2.4
VPS35-212ENST00000640313 ARHGAP19Q14CB8 494 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 MAD2L1BPQ15013 274 aaPredicted RBP0.09□□□□□ -2.4
VPS35-212ENST00000640313 SLC9A3R2Q15599 337 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 TSC22D1Q15714 1073 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 CDC37Q16543 378 aaPredicted RBP0.09□□□□□ -2.4
VPS35-212ENST00000640313 ZSCAN26Q16670 478 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 EXOC3L2Q2M3D2 409 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 KRTAP21-3Q3LHN1 58 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 SP6Q3SY56 376 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 CCDC152Q4G0S7 254 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 ORMDL2Q53FV1 153 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 MPV17L2Q567V2 206 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 TEX30Q5JUR7 227 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 OR2A2Q6IF42 318 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 DEGS2Q6QHC5 323 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 TBPL2Q6SJ96 375 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 SPNS3Q6ZMD2 512 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 H2BFWTQ7Z2G1 175 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 PEX26Q7Z412 305 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 OAFQ86UD1 273 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 CBLN2Q8IUK8 224 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 CCDC65Q8IXS2 484 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 FAM9BQ8IZU0 186 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 PDIK1LQ8N165 341 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 STK40Q8N2I9 435 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 ZNF645Q8N7E2 425 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 ARL10Q8N8L6 244 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 TTLQ8NG68 377 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 OR5T1Q8NG75 326 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 OR2L3Q8NG85 312 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 OR4F6Q8NGB9 312 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 OR4M1Q8NGD0 313 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 OR8J1Q8NGP2 316 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 OR1L6Q8NGR2 347 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 OR2A1Q8NGT9 310 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 OR13G1Q8NGZ3 307 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 OR2G2Q8NGZ5 317 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 LILRB4Q8NHJ6 448 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 CCDC110Q8TBZ0 833 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 RLN3Q8WXF3 142 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 SHC3Q92529 594 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 N4BP2L2Q92802 583 aaPredicted RBP0.09□□□□□ -2.4
VPS35-212ENST00000640313 CPNE4Q96A23 557 aaPredicted RBP0.09□□□□□ -2.4
VPS35-212ENST00000640313 NTAN1Q96AB6 310 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 WDR34Q96EX3 536 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 PIK3IP1Q96FE7 263 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 KCNS1Q96KK3 526 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 SENP8Q96LD8 212 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 HSFY1Q96LI6 401 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 TSGA13Q96PP4 275 aa0.09□□□□□ -2.4
VPS35-212ENST00000640313 RNF157Q96PX1 679 aa0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms