RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 FGF23Q9GZV9 251 aaPredicted RBP1.25□□□□□ -2.21
CCDC7-211ENST00000638889 EXOSC4Q9NPD3 245 aaKnown RBP1.25□□□□□ -2.21
CCDC7-211ENST00000638889 C8orf17Q9NRJ1 99 aa1.25□□□□□ -2.21
CCDC7-211ENST00000638889 DDX49Q9Y6V7 483 aaKnown RBP1.25□□□□□ -2.21
CCDC7-211ENST00000638889 ZNF407Q9C0G0 2248 aa1.24□□□□□ -2.21
CCDC7-211ENST00000638889 CNTNAP1P78357 1384 aa1.24□□□□□ -2.21
CCDC7-211ENST00000638889 ZNF816-ZNF321PA0A0X1KG74 233 aa1.24□□□□□ -2.21
CCDC7-211ENST00000638889 TMEM120BA0PK00 339 aa1.24□□□□□ -2.21
CCDC7-211ENST00000638889 FAM47DPA6NHR8 397 aa1.24□□□□□ -2.21
CCDC7-211ENST00000638889 BTNL10A8MVZ5 291 aa1.24□□□□□ -2.21
CCDC7-211ENST00000638889 GLAP06280 429 aa1.24□□□□□ -2.21
CCDC7-211ENST00000638889 ATP1B2P14415 290 aaPredicted RBP1.24□□□□□ -2.21
CCDC7-211ENST00000638889 ME2P23368 584 aa1.24□□□□□ -2.21
CCDC7-211ENST00000638889 WARSP23381 471 aaKnown RBP1.24□□□□□ -2.21
CCDC7-211ENST00000638889 TAS2R31P59538 309 aa1.24□□□□□ -2.21
CCDC7-211ENST00000638889 CRADDP78560 199 aa1.24□□□□□ -2.21
CCDC7-211ENST00000638889 RCAN2Q14206 197 aa1.24□□□□□ -2.21
CCDC7-211ENST00000638889 MPV17L2Q567V2 206 aa1.24□□□□□ -2.21
CCDC7-211ENST00000638889 RNASE13Q5GAN3 156 aaKnown RBP1.24□□□□□ -2.21
CCDC7-211ENST00000638889 FAM222AQ5U5X8 452 aa1.24□□□□□ -2.21
CCDC7-211ENST00000638889 LIX1Q8N485 282 aa1.24□□□□□ -2.21
CCDC7-211ENST00000638889 OR5M1Q8NGP8 315 aa1.24□□□□□ -2.21
CCDC7-211ENST00000638889 KLF14Q8TD94 323 aaPredicted RBP1.24□□□□□ -2.21
CCDC7-211ENST00000638889 PIBF1Q8WXW3 757 aa1.24□□□□□ -2.21
CCDC7-211ENST00000638889 SHANK2-AS3Q9BTD1 123 aa1.24□□□□□ -2.21
CCDC7-211ENST00000638889 SGK2Q9HBY8 427 aa1.24□□□□□ -2.21
CCDC7-211ENST00000638889 NT5MQ9NPB1 228 aa1.24□□□□□ -2.21
CCDC7-211ENST00000638889 ING4Q9UNL4 249 aa1.24□□□□□ -2.21
CCDC7-211ENST00000638889 SIGLEC7Q9Y286 467 aa1.24□□□□□ -2.21
CCDC7-211ENST00000638889 PCP4L1A6NKN8 68 aa1.23□□□□□ -2.21
CCDC7-211ENST00000638889 ZNF878C9JN71 531 aa1.23□□□□□ -2.21
CCDC7-211ENST00000638889 H6PDO95479 791 aa1.23□□□□□ -2.21
CCDC7-211ENST00000638889 TMEM50AO95807 157 aa1.23□□□□□ -2.21
CCDC7-211ENST00000638889 IGLV3-25P01717 112 aa1.23□□□□□ -2.21
CCDC7-211ENST00000638889 CD3GP09693 182 aa1.23□□□□□ -2.21
CCDC7-211ENST00000638889 KITLGP21583 273 aa1.23□□□□□ -2.21
CCDC7-211ENST00000638889 F2RP25116 425 aa1.23□□□□□ -2.21
CCDC7-211ENST00000638889 MRPS22P82650 360 aaKnown RBP1.23□□□□□ -2.21
CCDC7-211ENST00000638889 PRKCDQ05655 676 aa1.23□□□□□ -2.21
CCDC7-211ENST00000638889 ZNF235Q14590 738 aa1.23□□□□□ -2.21
CCDC7-211ENST00000638889 ATAD3BQ5T9A4 648 aa1.23□□□□□ -2.21
CCDC7-211ENST00000638889 GUSBP11Q6P575 273 aa1.23□□□□□ -2.21
CCDC7-211ENST00000638889 CASP12Q6UXS9 341 aa1.23□□□□□ -2.21
CCDC7-211ENST00000638889 PDIK1LQ8N165 341 aa1.23□□□□□ -2.21
CCDC7-211ENST00000638889 EID2Q8N6I1 236 aa1.23□□□□□ -2.21
CCDC7-211ENST00000638889 ZNF680Q8NEM1 530 aa1.23□□□□□ -2.21
CCDC7-211ENST00000638889 SDR9C7Q8NEX9 313 aa1.23□□□□□ -2.21
CCDC7-211ENST00000638889 TTLQ8NG68 377 aa1.23□□□□□ -2.21
CCDC7-211ENST00000638889 OR1S2Q8NGQ3 325 aa1.23□□□□□ -2.21
CCDC7-211ENST00000638889 UBE2Q2Q8WVN8 375 aa1.23□□□□□ -2.21
CCDC7-211ENST00000638889 HSD17B10Q99714 261 aaKnown RBP1.23□□□□□ -2.21
CCDC7-211ENST00000638889 ZNF639Q9UID6 485 aa1.23□□□□□ -2.21
CCDC7-211ENST00000638889 NPTNQ9Y639 398 aa1.23□□□□□ -2.21
CCDC7-211ENST00000638889 C15orf38-AP3S2A0A0A6YYH1 394 aa1.22□□□□□ -2.21
CCDC7-211ENST00000638889 IGLV1-36A0A0B4J1U3 117 aa1.22□□□□□ -2.21
CCDC7-211ENST00000638889 CLRN2A0PK11 232 aa1.22□□□□□ -2.21
CCDC7-211ENST00000638889 OR6C74A6NCV1 312 aa1.22□□□□□ -2.21
CCDC7-211ENST00000638889 GPR89AB7ZAQ6 455 aa1.22□□□□□ -2.21
CCDC7-211ENST00000638889 PPP1R2P9O14990 202 aa1.22□□□□□ -2.21
CCDC7-211ENST00000638889 CHST10O43529 356 aa1.22□□□□□ -2.21
CCDC7-211ENST00000638889 IGLV6-57P01721 117 aa1.22□□□□□ -2.21
CCDC7-211ENST00000638889 CTSLP07711 333 aa1.22□□□□□ -2.21
CCDC7-211ENST00000638889 GPR89BP0CG08 455 aa1.22□□□□□ -2.21
CCDC7-211ENST00000638889 ZNF250P15622 560 aa1.22□□□□□ -2.21
CCDC7-211ENST00000638889 RAB3AP20336 220 aa1.22□□□□□ -2.21
CCDC7-211ENST00000638889 LOXP28300 417 aaPredicted RBP1.22□□□□□ -2.21
CCDC7-211ENST00000638889 IFNA8P32881 189 aa1.22□□□□□ -2.21
CCDC7-211ENST00000638889 HCAR3P49019 387 aa1.22□□□□□ -2.21
CCDC7-211ENST00000638889 SSR4P51571 173 aa1.22□□□□□ -2.21
CCDC7-211ENST00000638889 RND2P52198 227 aa1.22□□□□□ -2.21
CCDC7-211ENST00000638889 VSX2P58304 361 aaPredicted RBP1.22□□□□□ -2.21
CCDC7-211ENST00000638889 SEC61GP60059 68 aa1.22□□□□□ -2.21
CCDC7-211ENST00000638889 YWHAGP61981 247 aaKnown RBP eCLIP1.22□□□□□ -2.21
CCDC7-211ENST00000638889 SLC25A11Q02978 314 aaKnown RBP1.22□□□□□ -2.21
CCDC7-211ENST00000638889 IMMTQ16891 758 aaKnown RBP1.22□□□□□ -2.21
CCDC7-211ENST00000638889 HCP5Q6MZN7 132 aa1.22□□□□□ -2.21
CCDC7-211ENST00000638889 ANKRD26P1Q6NSI1 321 aa1.22□□□□□ -2.21
CCDC7-211ENST00000638889 CCDC73Q6ZRK6 1079 aa1.22□□□□□ -2.21
CCDC7-211ENST00000638889 TMEM136Q6ZRR5 245 aa1.22□□□□□ -2.21
CCDC7-211ENST00000638889 ZFP41Q8N8Y5 198 aa1.22□□□□□ -2.21
CCDC7-211ENST00000638889 SLC41A3Q96GZ6 507 aa1.22□□□□□ -2.21
CCDC7-211ENST00000638889 DNAJC1Q96KC8 554 aaKnown RBP1.22□□□□□ -2.21
CCDC7-211ENST00000638889 PKNOX2Q96KN3 472 aa1.22□□□□□ -2.21
CCDC7-211ENST00000638889 IP6K3Q96PC2 410 aa1.22□□□□□ -2.21
CCDC7-211ENST00000638889 RBBP8Q99708 897 aa1.22□□□□□ -2.21
CCDC7-211ENST00000638889 ETNK2Q9NVF9 386 aa1.22□□□□□ -2.21
CCDC7-211ENST00000638889 VANGL2Q9ULK5 521 aa1.22□□□□□ -2.21
CCDC7-211ENST00000638889 IGHV7-4-1A0A0J9YVY3 117 aa1.21□□□□□ -2.22
CCDC7-211ENST00000638889 EEDO75530 441 aaKnown RBP1.21□□□□□ -2.22
CCDC7-211ENST00000638889 CLIC3O95833 236 aa1.21□□□□□ -2.22
CCDC7-211ENST00000638889 GPX4P36969 197 aaPredicted RBP1.21□□□□□ -2.22
CCDC7-211ENST00000638889 CDKN2DP55273 166 aa1.21□□□□□ -2.22
CCDC7-211ENST00000638889 KCNJ2P63252 427 aa1.21□□□□□ -2.22
CCDC7-211ENST00000638889 CCNA1P78396 465 aa1.21□□□□□ -2.22
CCDC7-211ENST00000638889 CDK5Q00535 292 aa1.21□□□□□ -2.22
CCDC7-211ENST00000638889 TCEAL5Q5H9L2 206 aa1.21□□□□□ -2.22
CCDC7-211ENST00000638889 C6orf226Q5I0X4 101 aa1.21□□□□□ -2.22
CCDC7-211ENST00000638889 MS4A15Q8N5U1 240 aa1.21□□□□□ -2.22
CCDC7-211ENST00000638889 SLC35G3Q8N808 338 aa1.21□□□□□ -2.22
CCDC7-211ENST00000638889 PLPPR1Q8TBJ4 325 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms