RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 SULT1B1O43704 296 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 VAMP5O95183 116 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 ABCD3P28288 659 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 SELENBP1Q13228 472 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 GUSBP11Q6P575 273 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 GABRG3Q99928 467 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 VN1R1Q9GZP7 353 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 SLCO1C1Q9NYB5 712 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 NRXN2Q9P2S2 1712 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 B3GALT5Q9Y2C3 310 aa13.03□□□□□ -0.32
SCARB2-208ENST00000638372 A0A0B4J2A0 478 aa13.02□□□□□ -0.32
SCARB2-208ENST00000638372 AIPO00170 330 aa13.02□□□□□ -0.32
SCARB2-208ENST00000638372 ATG12O94817 140 aa13.02□□□□□ -0.32
SCARB2-208ENST00000638372 WISP3O95389 354 aaPredicted RBP13.02□□□□□ -0.32
SCARB2-208ENST00000638372 SF3B4Q15427 424 aaKnown RBP eCLIP13.02□□□□□ -0.32
SCARB2-208ENST00000638372 RHOUQ7L0Q8 258 aa13.02□□□□□ -0.32
SCARB2-208ENST00000638372 STK35Q8TDR2 534 aa13.02□□□□□ -0.32
SCARB2-208ENST00000638372 GPR84Q9NQS5 396 aa13.02□□□□□ -0.32
SCARB2-208ENST00000638372 SHPKQ9UHJ6 478 aa13.02□□□□□ -0.32
SCARB2-208ENST00000638372 FADS1O60427 444 aa13.02□□□□□ -0.32
SCARB2-208ENST00000638372 C1QCP02747 245 aa13.02□□□□□ -0.32
SCARB2-208ENST00000638372 GRB2P62993 217 aaKnown RBP13.02□□□□□ -0.32
SCARB2-208ENST00000638372 C1QTNF6Q9BXI9 259 aa13.02□□□□□ -0.32
SCARB2-208ENST00000638372 OR6C76A6NM76 312 aa13.02□□□□□ -0.33
SCARB2-208ENST00000638372 ZNF628Q5EBL2 1059 aa13.02□□□□□ -0.33
SCARB2-208ENST00000638372 CBLN3Q6UW01 205 aa13.02□□□□□ -0.33
SCARB2-208ENST00000638372 THSD4Q6ZMP0 1018 aa13.02□□□□□ -0.33
SCARB2-208ENST00000638372 TMPRSS11FQ6ZWK6 438 aa13.02□□□□□ -0.33
SCARB2-208ENST00000638372 OR1N1Q8NGS0 311 aa13.02□□□□□ -0.33
SCARB2-208ENST00000638372 SULT4A1Q9BR01 284 aa13.02□□□□□ -0.33
SCARB2-208ENST00000638372 SLCO5A1Q9H2Y9 848 aa13.02□□□□□ -0.33
SCARB2-208ENST00000638372 NELFAQ9H3P2 528 aa13.02□□□□□ -0.33
SCARB2-208ENST00000638372 GPR173Q9NS66 373 aa13.02□□□□□ -0.33
SCARB2-208ENST00000638372 CDC42EP2O14613 210 aa13.02□□□□□ -0.33
SCARB2-208ENST00000638372 CCSO14618 274 aa13.02□□□□□ -0.33
SCARB2-208ENST00000638372 LIMS3P0CW19 117 aa13.02□□□□□ -0.33
SCARB2-208ENST00000638372 LIMS4P0CW20 117 aa13.02□□□□□ -0.33
SCARB2-208ENST00000638372 UBE2MP61081 183 aaKnown RBP13.02□□□□□ -0.33
SCARB2-208ENST00000638372 CDK5Q00535 292 aa13.02□□□□□ -0.33
SCARB2-208ENST00000638372 ACSM1Q08AH1 577 aa13.02□□□□□ -0.33
SCARB2-208ENST00000638372 PRICKLE4Q2TBC4 344 aa13.02□□□□□ -0.33
SCARB2-208ENST00000638372 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.02□□□□□ -0.33
SCARB2-208ENST00000638372 GLCCI1Q86VQ1 547 aa13.02□□□□□ -0.33
SCARB2-208ENST00000638372 KMT5CQ86Y97 462 aa13.02□□□□□ -0.33
SCARB2-208ENST00000638372 KIAA1958Q8N8K9 716 aa13.02□□□□□ -0.33
SCARB2-208ENST00000638372 TMEM178AQ8NBL3 297 aa13.02□□□□□ -0.33
SCARB2-208ENST00000638372 OR1L3Q8NH93 324 aa13.02□□□□□ -0.33
SCARB2-208ENST00000638372 SLAMF9Q96A28 289 aa13.02□□□□□ -0.33
SCARB2-208ENST00000638372 APH1AQ96BI3 265 aa13.02□□□□□ -0.33
SCARB2-208ENST00000638372 C3orf49Q96BT1 292 aa13.02□□□□□ -0.33
SCARB2-208ENST00000638372 LRFN5Q96NI6 719 aa13.02□□□□□ -0.33
SCARB2-208ENST00000638372 B9D1Q9UPM9 204 aa13.02□□□□□ -0.33
SCARB2-208ENST00000638372 CACNA1GO43497 2377 aa13.02□□□□□ -0.33
SCARB2-208ENST00000638372 IGHV1OR21-1A0A087WYE8 117 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 PRSS23O95084 383 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 TPOP07202 933 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 BDH1Q02338 343 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 HNF4GQ14541 408 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 STAC2Q6ZMT1 411 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 OR2I1PQ8NGU4 316 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 SLC25A21Q9BQT8 299 aaPredicted RBP13.01□□□□□ -0.33
SCARB2-208ENST00000638372 MENTQ9BUN1 341 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 ABHD6Q9BV23 337 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 ARRDC1-AS1Q9H2J1 176 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 PTTG3PQ9NZH4 202 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 NTN1O95631 604 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 UBBP0CG47 229 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 LAP3P28838 519 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 KIR2DL1P43626 348 aaPredicted RBP13.01□□□□□ -0.33
SCARB2-208ENST00000638372 GPR3P46089 330 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 DUSP2Q05923 314 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 SLC17A1Q14916 467 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 ZNF74Q16587 644 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 ACTBL2Q562R1 376 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 RBM38Q9H0Z9 239 aaKnown RBP13.01□□□□□ -0.33
SCARB2-208ENST00000638372 NPAP1Q9NZP6 1156 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 IGHV1OR15-9A0A0B4J2B8 117 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 ARGFXA6NJG6 315 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 RAB6AP20340 208 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 ERVK-16P61578 105 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 C8orf82Q6P1X6 216 aaPredicted RBP13.01□□□□□ -0.33
SCARB2-208ENST00000638372 UBE3DQ7Z6J8 389 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 SFTPA2Q8IWL1 248 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 CNTNAP3BQ96NU0 1288 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 NKX3-1Q99801 234 aaPredicted RBP13.01□□□□□ -0.33
SCARB2-208ENST00000638372 DEFB127Q9H1M4 99 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 FLVCR2Q9UPI3 526 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 LOXL2Q9Y4K0 774 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 M0R135 149 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 IFNA1P01562 189 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 CHRM2P08172 466 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 PHLDA2Q53GA4 152 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 OR1M1Q8NGA1 313 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 OR52N5Q8NH56 324 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 ZNF799Q96GE5 643 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 AUNIPQ9H7T9 357 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 MMP25Q9NPA2 562 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 LANCL2Q9NS86 450 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 TP53TG5Q9Y2B4 290 aa13.01□□□□□ -0.33
SCARB2-208ENST00000638372 ZFC3H1O60293 1989 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms