RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 PIGCQ92535 297 aa13.92□□□□□ -0.18
UBE3A-227ENST00000638011 ISG20Q96AZ6 181 aaKnown RBP13.92□□□□□ -0.18
UBE3A-227ENST00000638011 ADGRG7Q96K78 797 aa13.92□□□□□ -0.18
UBE3A-227ENST00000638011 GPR78Q96P69 363 aa13.92□□□□□ -0.18
UBE3A-227ENST00000638011 DUXBA0A1W2PPF3 345 aa13.92□□□□□ -0.18
UBE3A-227ENST00000638011 BMPR1BO00238 502 aa13.92□□□□□ -0.18
UBE3A-227ENST00000638011 ZNF593O00488 134 aaPredicted RBP13.92□□□□□ -0.18
UBE3A-227ENST00000638011 ATXN1LP0C7T5 689 aaKnown RBP13.92□□□□□ -0.18
UBE3A-227ENST00000638011 BMPR1AP36894 532 aa13.92□□□□□ -0.18
UBE3A-227ENST00000638011 HIST3H3Q16695 136 aa13.92□□□□□ -0.18
UBE3A-227ENST00000638011 C12orf54Q6X4T0 127 aa13.92□□□□□ -0.18
UBE3A-227ENST00000638011 FAM57BQ71RH2 274 aa13.92□□□□□ -0.18
UBE3A-227ENST00000638011 ZNF595Q8IYB9 648 aa13.92□□□□□ -0.18
UBE3A-227ENST00000638011 STPG2Q8N412 459 aa13.92□□□□□ -0.18
UBE3A-227ENST00000638011 OR4C16Q8NGL9 310 aa13.92□□□□□ -0.18
UBE3A-227ENST00000638011 RPUSD4Q96CM3 377 aaKnown RBP13.92□□□□□ -0.18
UBE3A-227ENST00000638011 TRAV27A0A087WT01 109 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 FEZF1A0PJY2 475 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 TBX18O95935 607 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 TNFRSF1BP20333 461 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 ZNF718Q3SXZ3 478 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 PLAC9Q5JTB6 97 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 MRPL2Q5T653 305 aaKnown RBP13.91□□□□□ -0.18
UBE3A-227ENST00000638011 ACOT4Q8N9L9 421 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 SMIM19Q96E16 107 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 SLC17A5Q9NRA2 495 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 FZD1Q9UP38 647 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 NWD2Q9ULI1 1742 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 FAM74A7A6NL05 159 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 SCGB1A1P11684 91 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 EVX1P49640 407 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 PNLIPRP3Q17RR3 467 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 UTP4Q969X6 686 aaKnown RBP13.91□□□□□ -0.18
UBE3A-227ENST00000638011 NPAS1Q99742 590 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 ZNF426Q9BUY5 554 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 VCX2Q9H322 139 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 SH3BGRL2Q9UJC5 107 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 GPR34Q9UPC5 381 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 Q9Y3F1 56 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 ACOD1A6NK06 481 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 RNGTTO60942 597 aaKnown RBP13.91□□□□□ -0.18
UBE3A-227ENST00000638011 ITGB7P26010 798 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 Q6ZVL8 140 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 ZNF429Q86V71 674 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 NALCNQ8IZF0 1738 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 NARFLQ9H6Q4 476 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 TMX2-CTNND1H3BSU7 103 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 GASTP01350 101 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 IGHEP01854 428 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 GPM6AP51674 278 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 TMEM128Q5BJH2 165 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 ZFP62Q8NB50 900 aaPredicted RBP13.91□□□□□ -0.18
UBE3A-227ENST00000638011 TMEM191AQ9H0A3 160 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 INSL6Q9Y581 213 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 ZNF142P52746 1687 aaPredicted RBP13.91□□□□□ -0.18
UBE3A-227ENST00000638011 TRBV4-1A0A0J9YWV2 114 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 ELAVL4P26378 380 aaKnown RBP13.91□□□□□ -0.18
UBE3A-227ENST00000638011 CSF2RBP32927 897 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 XCR1P46094 333 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 IHHQ14623 411 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 PRAMEF19Q5SWL8 479 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 NECAP1Q8NC96 275 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 COL25A1Q9BXS0 654 aaPredicted RBP13.91□□□□□ -0.18
UBE3A-227ENST00000638011 IKZF5Q9H5V7 419 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 CBLCQ9ULV8 474 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 SOCS6O14544 535 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 FDX2Q6P4F2 183 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 ARHGEF39Q8N4T4 335 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 DTWD2Q8NBA8 298 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 OR52R1Q8NGF1 315 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 PPP1R1CQ8WVI7 109 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 SCMH1Q96GD3 660 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 H3BML4 177 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 HOXC11O43248 304 aaPredicted RBP13.91□□□□□ -0.18
UBE3A-227ENST00000638011 HIST1H1TP22492 207 aaPredicted RBP13.91□□□□□ -0.18
UBE3A-227ENST00000638011 CMTM8Q8IZV2 173 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 SLC26A10Q8NG04 563 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 BCL2L2Q92843 193 aaPredicted RBP13.91□□□□□ -0.18
UBE3A-227ENST00000638011 MUCL1Q96DR8 90 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 FAM210BQ96KR6 192 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 ULBP2Q9BZM5 246 aa13.91□□□□□ -0.18
UBE3A-227ENST00000638011 ATXN7L1Q9ULK2 861 aaPredicted RBP13.91□□□□□ -0.18
UBE3A-227ENST00000638011 RIMBP3CA6NJZ7 1639 aa13.9□□□□□ -0.18
UBE3A-227ENST00000638011 RIMBP3BA6NNM3 1639 aa13.9□□□□□ -0.18
UBE3A-227ENST00000638011 RIMBP3Q9UFD9 1639 aa13.9□□□□□ -0.18
UBE3A-227ENST00000638011 NKX6-3A6NJ46 265 aa13.9□□□□□ -0.18
UBE3A-227ENST00000638011 HMGN2P05204 90 aaKnown RBP13.9□□□□□ -0.18
UBE3A-227ENST00000638011 NANOGP1Q8N7R0 232 aa13.9□□□□□ -0.18
UBE3A-227ENST00000638011 PRSS16Q9NQE7 514 aa13.9□□□□□ -0.18
UBE3A-227ENST00000638011 NXPH2O95156 264 aa13.9□□□□□ -0.18
UBE3A-227ENST00000638011 CD14P08571 375 aa13.9□□□□□ -0.18
UBE3A-227ENST00000638011 POU3F1Q03052 451 aaPredicted RBP13.9□□□□□ -0.18
UBE3A-227ENST00000638011 NNATQ16517 81 aa13.9□□□□□ -0.18
UBE3A-227ENST00000638011 TTC32Q5I0X7 151 aa13.9□□□□□ -0.18
UBE3A-227ENST00000638011 FCRLBQ6BAA4 426 aa13.9□□□□□ -0.18
UBE3A-227ENST00000638011 C11orf42Q8N5U0 333 aa13.9□□□□□ -0.18
UBE3A-227ENST00000638011 RTP3Q9BQQ7 232 aa13.9□□□□□ -0.18
UBE3A-227ENST00000638011 AAMDCQ9H7C9 122 aa13.9□□□□□ -0.18
UBE3A-227ENST00000638011 LRIT1Q9P2V4 623 aa13.9□□□□□ -0.18
UBE3A-227ENST00000638011 GBF1Q92538 1859 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms