RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 SEMA4FO95754 770 aa17.84■□□□□ 0.45
CACNA1A-257ENST00000638009 COX19Q49B96 90 aa17.84■□□□□ 0.45
CACNA1A-257ENST00000638009 TMEM184AQ6ZMB5 413 aa17.84■□□□□ 0.45
CACNA1A-257ENST00000638009 MTMR14Q8NCE2 650 aa17.84■□□□□ 0.45
CACNA1A-257ENST00000638009 HIST1H1BP16401 226 aaKnown RBP17.83■□□□□ 0.45
CACNA1A-257ENST00000638009 CD80P33681 288 aa17.83■□□□□ 0.45
CACNA1A-257ENST00000638009 DPPA4Q7L190 304 aa17.83■□□□□ 0.45
CACNA1A-257ENST00000638009 RPL3LQ92901 407 aaKnown RBP17.83■□□□□ 0.45
CACNA1A-257ENST00000638009 ACACAQ13085 2346 aa17.83■□□□□ 0.45
CACNA1A-257ENST00000638009 OR1L1Q8NH94 360 aa17.83■□□□□ 0.45
CACNA1A-257ENST00000638009 FLVCR2Q9UPI3 526 aa17.83■□□□□ 0.45
CACNA1A-257ENST00000638009 KLF7O75840 302 aaPredicted RBP17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 FGF18O76093 207 aa17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 EMP3P54852 163 aa17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 MRPL2Q5T653 305 aaKnown RBP17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 LBX2Q6XYB7 198 aa17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 MBOAT2Q6ZWT7 520 aa17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 ERASQ7Z444 233 aa17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 FUBP1Q96AE4 644 aaKnown RBP17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 FLVCR1Q9Y5Y0 555 aa17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 TRBV11-1A0A0K0K1C0 115 aa17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 ABCD3P28288 659 aa17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 SSR4P51571 173 aa17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 MS4A2Q01362 244 aa17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 SPRED1Q7Z699 444 aa17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 RPUSD4Q96CM3 377 aaKnown RBP17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 NDRG4Q9ULP0 352 aaKnown RBP17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 MST1RQ04912 1400 aa17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 A0A1W2PQU0 124 aa17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 PPP1CAP62136 330 aa17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 DOC2BQ14184 412 aa17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 DRAM2Q6UX65 266 aa17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 NTMT1Q9BV86 223 aa17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 NID2Q14112 1375 aa17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 SNRPGP15A8MWD9 76 aa17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 SNHG28P0DPA3 235 aa17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 ARRDC3Q96B67 414 aa17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 DDOQ99489 341 aa17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 PTDSS2Q9BVG9 487 aa17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 WWTR1Q9GZV5 400 aa17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 HES4Q9HCC6 221 aa17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 ARHGAP32A7KAX9 2087 aa17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 A0A0U1RQF3 1178 aa17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 H3BVH4 76 aa17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 DRD1P21728 446 aa17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 NR0B2Q15466 257 aa17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 EMC4Q5J8M3 183 aa17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 SLC26A10Q8NG04 563 aa17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 GPR150Q8NGU9 434 aa17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 RTL8AQ9BWD3 113 aa17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 OR1A1Q9P1Q5 309 aa17.83■□□□□ 0.44
CACNA1A-257ENST00000638009 GNG4P50150 75 aa17.82■□□□□ 0.44
CACNA1A-257ENST00000638009 MARCH8Q5T0T0 291 aa17.82■□□□□ 0.44
CACNA1A-257ENST00000638009 STUMQ69YW2 141 aa17.82■□□□□ 0.44
CACNA1A-257ENST00000638009 GHSRQ92847 366 aa17.82■□□□□ 0.44
CACNA1A-257ENST00000638009 NEIL1Q96FI4 390 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-257ENST00000638009 SLC45A1Q9Y2W3 748 aa17.82■□□□□ 0.44
CACNA1A-257ENST00000638009 AMDHD2Q9Y303 409 aa17.82■□□□□ 0.44
CACNA1A-257ENST00000638009 NPY4RP50391 375 aa17.82■□□□□ 0.44
CACNA1A-257ENST00000638009 ZNF468Q5VIY5 522 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-257ENST00000638009 LHFPL2Q6ZUX7 228 aa17.82■□□□□ 0.44
CACNA1A-257ENST00000638009 SCCPDHQ8NBX0 429 aa17.82■□□□□ 0.44
CACNA1A-257ENST00000638009 POM121L2Q96KW2 1035 aa17.82■□□□□ 0.44
CACNA1A-257ENST00000638009 ROBO1Q9Y6N7 1651 aa17.82■□□□□ 0.44
CACNA1A-257ENST00000638009 TRABD2BA6NFA1 517 aa17.82■□□□□ 0.44
CACNA1A-257ENST00000638009 OR1L3Q8NH93 324 aa17.82■□□□□ 0.44
CACNA1A-257ENST00000638009 EID2BQ96D98 161 aa17.82■□□□□ 0.44
CACNA1A-257ENST00000638009 TET1Q8NFU7 2136 aa17.82■□□□□ 0.44
CACNA1A-257ENST00000638009 BCL9LQ86UU0 1499 aa17.82■□□□□ 0.44
CACNA1A-257ENST00000638009 TFAP2AP05549 437 aa17.82■□□□□ 0.44
CACNA1A-257ENST00000638009 FECHP22830 423 aa17.82■□□□□ 0.44
CACNA1A-257ENST00000638009 DSC1Q08554 894 aa17.82■□□□□ 0.44
CACNA1A-257ENST00000638009 GGNBP1Q5YKI7 109 aa17.82■□□□□ 0.44
CACNA1A-257ENST00000638009 CLECL1Q8IZS7 167 aa17.82■□□□□ 0.44
CACNA1A-257ENST00000638009 TMEM178AQ8NBL3 297 aa17.82■□□□□ 0.44
CACNA1A-257ENST00000638009 EDEM2Q9BV94 578 aa17.82■□□□□ 0.44
CACNA1A-257ENST00000638009 ZNF716A6NP11 495 aa17.82■□□□□ 0.44
CACNA1A-257ENST00000638009 CDKN2DP55273 166 aa17.82■□□□□ 0.44
CACNA1A-257ENST00000638009 ILKQ13418 452 aa17.82■□□□□ 0.44
CACNA1A-257ENST00000638009 ALKBH1Q13686 389 aaKnown RBP17.82■□□□□ 0.44
CACNA1A-257ENST00000638009 SHHQ15465 462 aa17.82■□□□□ 0.44
CACNA1A-257ENST00000638009 LRP11Q86VZ4 500 aa17.82■□□□□ 0.44
CACNA1A-257ENST00000638009 OR8G1Q15617 311 aa17.82■□□□□ 0.44
CACNA1A-257ENST00000638009 DOLPP1Q86YN1 238 aa17.82■□□□□ 0.44
CACNA1A-257ENST00000638009 OR4C16Q8NGL9 310 aa17.82■□□□□ 0.44
CACNA1A-257ENST00000638009 GALR1P47211 349 aa17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 CDCA2Q69YH5 1023 aaPredicted RBP17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 RPS27LQ71UM5 84 aaKnown RBP17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 ST8SIA2Q92186 375 aa17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 ZNF395Q9H8N7 513 aaPredicted RBP17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 DCCP43146 1447 aa17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 TCN2P20062 427 aa17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 HOXA4Q00056 320 aaPredicted RBP17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 OR4D1Q15615 310 aa17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 ABHD4Q8TB40 342 aa17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 SUCNR1Q9BXA5 334 aa17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 MRPL13Q9BYD1 178 aaKnown RBP17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 ING1Q9UK53 422 aaPredicted RBP17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 TCRBV3S1A0A5B6 114 aa17.81■□□□□ 0.44
CACNA1A-257ENST00000638009 VNN1O95497 513 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms