RNA–Protein interactions for RNA: ENST00000637551.2

CLN3-259, Transcript of CLN3, battenin, humanhuman

TSL 5 BASIC

Gene CLN3, Length 1,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-259ENST00000637551 PAPOLBQ9NRJ5 636 aaKnown RBP15.78■□□□□ 0.12
CLN3-259ENST00000637551 ACANP16112 2415 aa15.78■□□□□ 0.12
CLN3-259ENST00000637551 DCTN6O00399 190 aa15.77■□□□□ 0.12
CLN3-259ENST00000637551 SGCEO43556 437 aa15.77■□□□□ 0.12
CLN3-259ENST00000637551 SOX14O95416 240 aa15.77■□□□□ 0.12
CLN3-259ENST00000637551 OR4A8P0C604 315 aa15.77■□□□□ 0.12
CLN3-259ENST00000637551 FOSL1P15407 271 aa15.77■□□□□ 0.12
CLN3-259ENST00000637551 GDI2P50395 445 aaKnown RBP15.77■□□□□ 0.12
CLN3-259ENST00000637551 ATP5J2P56134 94 aa15.77■□□□□ 0.12
CLN3-259ENST00000637551 CDK5Q00535 292 aa15.77■□□□□ 0.12
CLN3-259ENST00000637551 ECH1Q13011 328 aa15.77■□□□□ 0.12
CLN3-259ENST00000637551 RAB35Q15286 201 aa15.77■□□□□ 0.12
CLN3-259ENST00000637551 CPEB3Q8NE35 698 aaKnown RBP15.77■□□□□ 0.12
CLN3-259ENST00000637551 MRPL24Q96A35 216 aaKnown RBP15.77■□□□□ 0.12
CLN3-259ENST00000637551 WNT5BQ9H1J7 359 aa15.77■□□□□ 0.12
CLN3-259ENST00000637551 ELOVL3Q9HB03 270 aa15.77■□□□□ 0.12
CLN3-259ENST00000637551 MYOZ1Q9NP98 299 aaPredicted RBP15.77■□□□□ 0.12
CLN3-259ENST00000637551 OR6C6A6NF89 314 aa15.76■□□□□ 0.11
CLN3-259ENST00000637551 CSF3P09919 207 aa15.76■□□□□ 0.11
CLN3-259ENST00000637551 PATE4P0C8F1 98 aa15.76■□□□□ 0.11
CLN3-259ENST00000637551 RGS6P49758 472 aa15.76■□□□□ 0.11
CLN3-259ENST00000637551 DSCR9P59020 149 aa15.76■□□□□ 0.11
CLN3-259ENST00000637551 SELENOVP59797 346 aa15.76■□□□□ 0.11
CLN3-259ENST00000637551 ADAM8P78325 824 aa15.76■□□□□ 0.11
CLN3-259ENST00000637551 MOGQ16653 247 aa15.76■□□□□ 0.11
CLN3-259ENST00000637551 PCK2Q16822 640 aa15.76■□□□□ 0.11
CLN3-259ENST00000637551 MST1LQ2TV78 715 aa15.76■□□□□ 0.11
CLN3-259ENST00000637551 TEX30Q5JUR7 227 aa15.76■□□□□ 0.11
CLN3-259ENST00000637551 Q5PR19 223 aa15.76■□□□□ 0.11
CLN3-259ENST00000637551 KDM4DQ6B0I6 523 aa15.76■□□□□ 0.11
CLN3-259ENST00000637551 RHOUQ7L0Q8 258 aa15.76■□□□□ 0.11
CLN3-259ENST00000637551 KRTAP1-3Q8IUG1 177 aa15.76■□□□□ 0.11
CLN3-259ENST00000637551 SLC37A3Q8NCC5 494 aa15.76■□□□□ 0.11
CLN3-259ENST00000637551 OR10H5Q8NGA6 315 aa15.76■□□□□ 0.11
CLN3-259ENST00000637551 OR4Q3Q8NH05 313 aa15.76■□□□□ 0.11
CLN3-259ENST00000637551 C11orf40Q8WZ69 217 aa15.76■□□□□ 0.11
CLN3-259ENST00000637551 COQ7Q99807 217 aa15.76■□□□□ 0.11
CLN3-259ENST00000637551 FN3KQ9H479 309 aa15.76■□□□□ 0.11
CLN3-259ENST00000637551 TBCCD1Q9NVR7 557 aa15.76■□□□□ 0.11
CLN3-259ENST00000637551 ASH2LQ9UBL3 628 aa15.76■□□□□ 0.11
CLN3-259ENST00000637551 EIF3KQ9UBQ5 218 aaKnown RBP15.76■□□□□ 0.11
CLN3-259ENST00000637551 CGGBP1Q9UFW8 167 aaPredicted RBP15.76■□□□□ 0.11
CLN3-259ENST00000637551 GPR160Q9UJ42 338 aa15.76■□□□□ 0.11
CLN3-259ENST00000637551 IGLV3-9A0A075B6K5 115 aa15.75■□□□□ 0.11
CLN3-259ENST00000637551 PRODHO43272 600 aa15.75■□□□□ 0.11
CLN3-259ENST00000637551 SYNGR3O43761 229 aa15.75■□□□□ 0.11
CLN3-259ENST00000637551 ERCC1P07992 297 aaPredicted RBP15.75■□□□□ 0.11
CLN3-259ENST00000637551 ZNF250P15622 560 aa15.75■□□□□ 0.11
CLN3-259ENST00000637551 ZNF23P17027 643 aa15.75■□□□□ 0.11
CLN3-259ENST00000637551 APEX1P27695 318 aaKnown RBP15.75■□□□□ 0.11
CLN3-259ENST00000637551 THBS4P35443 961 aa15.75■□□□□ 0.11
CLN3-259ENST00000637551 UCP2P55851 309 aa15.75■□□□□ 0.11
CLN3-259ENST00000637551 GABPB1Q06547 395 aaPredicted RBP15.75■□□□□ 0.11
CLN3-259ENST00000637551 SLC35F1Q5T1Q4 408 aa15.75■□□□□ 0.11
CLN3-259ENST00000637551 VASH1Q7L8A9 365 aaPredicted RBP15.75■□□□□ 0.11
CLN3-259ENST00000637551 CACNG6Q9BXT2 260 aa15.75■□□□□ 0.11
CLN3-259ENST00000637551 CYB5R1Q9UHQ9 305 aa15.75■□□□□ 0.11
CLN3-259ENST00000637551 POLR1DQ9Y2S0 133 aa15.75■□□□□ 0.11
CLN3-259ENST00000637551 DOK2O60496 412 aa15.74■□□□□ 0.11
CLN3-259ENST00000637551 FMO3P31513 532 aa15.74■□□□□ 0.11
CLN3-259ENST00000637551 CRISP1P54107 249 aa15.74■□□□□ 0.11
CLN3-259ENST00000637551 TEKQ02763 1124 aa15.74■□□□□ 0.11
CLN3-259ENST00000637551 CRMP1Q14194 572 aa15.74■□□□□ 0.11
CLN3-259ENST00000637551 KPNB1Q14974 876 aaKnown RBP15.74■□□□□ 0.11
CLN3-259ENST00000637551 KRT80Q6KB66 452 aa15.74■□□□□ 0.11
CLN3-259ENST00000637551 RGS7BPQ6MZT1 257 aaPredicted RBP15.74■□□□□ 0.11
CLN3-259ENST00000637551 DNM1P46Q6ZS02 220 aa15.74■□□□□ 0.11
CLN3-259ENST00000637551 HS3ST5Q8IZT8 346 aa15.74■□□□□ 0.11
CLN3-259ENST00000637551 PROKR2Q8NFJ6 384 aa15.74■□□□□ 0.11
CLN3-259ENST00000637551 HTRA1Q92743 480 aa15.74■□□□□ 0.11
CLN3-259ENST00000637551 PERPQ96FX8 193 aa15.74■□□□□ 0.11
CLN3-259ENST00000637551 TSSK2Q96PF2 358 aa15.74■□□□□ 0.11
CLN3-259ENST00000637551 DOK1Q99704 481 aa15.74■□□□□ 0.11
CLN3-259ENST00000637551 RBM4BQ9BQ04 359 aaKnown RBP15.74■□□□□ 0.11
CLN3-259ENST00000637551 MS4A5Q9H3V2 200 aa15.74■□□□□ 0.11
CLN3-259ENST00000637551 MARCH7Q9H992 704 aa15.74■□□□□ 0.11
CLN3-259ENST00000637551 SRA1Q9HD15 236 aaKnown RBP15.74■□□□□ 0.11
CLN3-259ENST00000637551 EMC7Q9NPA0 242 aa15.74■□□□□ 0.11
CLN3-259ENST00000637551 KRT84Q9NSB2 600 aa15.74■□□□□ 0.11
CLN3-259ENST00000637551 SLCO1C1Q9NYB5 712 aa15.74■□□□□ 0.11
CLN3-259ENST00000637551 PLEK2Q9NYT0 353 aa15.74■□□□□ 0.11
CLN3-259ENST00000637551 LHFPL6Q9Y693 200 aa15.74■□□□□ 0.11
CLN3-259ENST00000637551 LOC100509620A0A075B734 347 aa15.73■□□□□ 0.11
CLN3-259ENST00000637551 SURF4O15260 269 aa15.73■□□□□ 0.11
CLN3-259ENST00000637551 TFP02787 698 aa15.73■□□□□ 0.11
CLN3-259ENST00000637551 SCG5P05408 212 aa15.73■□□□□ 0.11
CLN3-259ENST00000637551 SPI1P17947 270 aa15.73■□□□□ 0.11
CLN3-259ENST00000637551 PRKACGP22612 351 aa15.73■□□□□ 0.11
CLN3-259ENST00000637551 GGT2P36268 569 aa15.73■□□□□ 0.11
CLN3-259ENST00000637551 DAPP51397 102 aa15.73■□□□□ 0.11
CLN3-259ENST00000637551 EFNA4P52798 201 aa15.73■□□□□ 0.11
CLN3-259ENST00000637551 PPP2R2BQ00005 443 aa15.73■□□□□ 0.11
CLN3-259ENST00000637551 GINS1Q14691 196 aa15.73■□□□□ 0.11
CLN3-259ENST00000637551 FAM209AQ5JX71 171 aa15.73■□□□□ 0.11
CLN3-259ENST00000637551 SLC35D3Q5M8T2 416 aa15.73■□□□□ 0.11
CLN3-259ENST00000637551 ELFN2Q5R3F8 820 aa15.73■□□□□ 0.11
CLN3-259ENST00000637551 MBNL2Q5VZF2 373 aaKnown RBP15.73■□□□□ 0.11
CLN3-259ENST00000637551 SLC18B1Q6NT16 456 aa15.73■□□□□ 0.11
CLN3-259ENST00000637551 UGT2A3Q6UWM9 527 aa15.73■□□□□ 0.11
CLN3-259ENST00000637551 OR2AJ1Q8NGZ0 328 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms