RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 HTR1FP30939 366 aa13.91□□□□□ -0.18
CLN6-216ENST00000636876 HSPA13P48723 471 aa13.91□□□□□ -0.18
CLN6-216ENST00000636876 CDH11P55287 796 aa13.91□□□□□ -0.18
CLN6-216ENST00000636876 HIST1H3AP68431 136 aa13.91□□□□□ -0.18
CLN6-216ENST00000636876 PSG4Q00888 419 aa13.91□□□□□ -0.18
CLN6-216ENST00000636876 IL5RAQ01344 420 aa13.91□□□□□ -0.18
CLN6-216ENST00000636876 SCRN3Q0VDG4 424 aa13.91□□□□□ -0.18
CLN6-216ENST00000636876 RAB39AQ14964 217 aa13.91□□□□□ -0.18
CLN6-216ENST00000636876 PCK2Q16822 640 aa13.91□□□□□ -0.18
CLN6-216ENST00000636876 TEX30Q5JUR7 227 aa13.91□□□□□ -0.18
CLN6-216ENST00000636876 NCMAPQ5T1S8 102 aa13.91□□□□□ -0.18
CLN6-216ENST00000636876 HIST2H3PS2Q5TEC6 136 aa13.91□□□□□ -0.18
CLN6-216ENST00000636876 MEDAGQ5VYS4 303 aa13.91□□□□□ -0.18
CLN6-216ENST00000636876 SLC18B1Q6NT16 456 aa13.91□□□□□ -0.18
CLN6-216ENST00000636876 TMEM108Q6UXF1 575 aa13.91□□□□□ -0.18
CLN6-216ENST00000636876 HIST2H3AQ71DI3 136 aa13.91□□□□□ -0.18
CLN6-216ENST00000636876 MYPOPQ86VE0 399 aaPredicted RBP13.91□□□□□ -0.18
CLN6-216ENST00000636876 ERI1Q8IV48 349 aaKnown RBP13.91□□□□□ -0.18
CLN6-216ENST00000636876 LINC00346Q8IVM7 164 aa13.91□□□□□ -0.18
CLN6-216ENST00000636876 SETD9Q8NE22 299 aa13.91□□□□□ -0.18
CLN6-216ENST00000636876 AKR7LQ8NHP1 331 aa13.91□□□□□ -0.18
CLN6-216ENST00000636876 RFKQ969G6 155 aa13.91□□□□□ -0.18
CLN6-216ENST00000636876 PLPPR2Q96GM1 343 aa13.91□□□□□ -0.18
CLN6-216ENST00000636876 CDADC1Q9BWV3 514 aa13.91□□□□□ -0.18
CLN6-216ENST00000636876 RASSF4Q9H2L5 321 aa13.91□□□□□ -0.18
CLN6-216ENST00000636876 ESRP2Q9H6T0 727 aaKnown RBP13.91□□□□□ -0.18
CLN6-216ENST00000636876 AASSQ9UDR5 926 aa13.91□□□□□ -0.18
CLN6-216ENST00000636876 CYB5R1Q9UHQ9 305 aa13.91□□□□□ -0.18
CLN6-216ENST00000636876 ROS1P08922 2347 aa13.91□□□□□ -0.18
CLN6-216ENST00000636876 HEATR1Q9H583 2144 aaKnown RBP13.9□□□□□ -0.18
CLN6-216ENST00000636876 ZNF593O00488 134 aaPredicted RBP13.9□□□□□ -0.18
CLN6-216ENST00000636876 SGCEO43556 437 aa13.9□□□□□ -0.18
CLN6-216ENST00000636876 TMCC2O75069 709 aa13.9□□□□□ -0.18
CLN6-216ENST00000636876 GNAO1P09471 354 aa13.9□□□□□ -0.18
CLN6-216ENST00000636876 SPARCP09486 303 aa13.9□□□□□ -0.18
CLN6-216ENST00000636876 PSKH1P11801 424 aa13.9□□□□□ -0.18
CLN6-216ENST00000636876 CD40P25942 277 aa13.9□□□□□ -0.18
CLN6-216ENST00000636876 RPS27P42677 84 aaKnown RBP13.9□□□□□ -0.18
CLN6-216ENST00000636876 NR1H2P55055 460 aa13.9□□□□□ -0.18
CLN6-216ENST00000636876 PLP2Q04941 152 aa13.9□□□□□ -0.18
CLN6-216ENST00000636876 BSPH1Q075Z2 132 aa13.9□□□□□ -0.18
CLN6-216ENST00000636876 GGTLC2Q14390 218 aa13.9□□□□□ -0.18
CLN6-216ENST00000636876 MAD2L1BPQ15013 274 aaPredicted RBP13.9□□□□□ -0.18
CLN6-216ENST00000636876 SNCBQ16143 134 aa13.9□□□□□ -0.18
CLN6-216ENST00000636876 C6orf52Q5T4I8 152 aa13.9□□□□□ -0.18
CLN6-216ENST00000636876 CORO6Q6QEF8 472 aa13.9□□□□□ -0.18
CLN6-216ENST00000636876 USP51Q70EK9 711 aa13.9□□□□□ -0.18
CLN6-216ENST00000636876 ZNF584Q8IVC4 421 aa13.9□□□□□ -0.18
CLN6-216ENST00000636876 ZNF295-AS1Q8N0V1 137 aa13.9□□□□□ -0.18
CLN6-216ENST00000636876 GJC3Q8NFK1 279 aa13.9□□□□□ -0.18
CLN6-216ENST00000636876 OR6N2Q8NGY6 317 aa13.9□□□□□ -0.18
CLN6-216ENST00000636876 OR2AJ1Q8NGZ0 328 aa13.9□□□□□ -0.18
CLN6-216ENST00000636876 PIK3IP1Q96FE7 263 aa13.9□□□□□ -0.18
CLN6-216ENST00000636876 MS4A3Q96HJ5 214 aa13.9□□□□□ -0.18
CLN6-216ENST00000636876 CLN6Q9NWW5 311 aa13.9□□□□□ -0.18
CLN6-216ENST00000636876 HAO2Q9NYQ3 351 aa13.9□□□□□ -0.18
CLN6-216ENST00000636876 WARS2Q9UGM6 360 aaKnown RBP13.9□□□□□ -0.18
CLN6-216ENST00000636876 GDF2Q9UK05 429 aaPredicted RBP13.9□□□□□ -0.18
CLN6-216ENST00000636876 IQCMA0A1B0GVH7 501 aa13.89□□□□□ -0.19
CLN6-216ENST00000636876 FAM221AA4D161 298 aa13.89□□□□□ -0.19
CLN6-216ENST00000636876 RER1O15258 196 aa13.89□□□□□ -0.19
CLN6-216ENST00000636876 SELENOFO60613 162 aa13.89□□□□□ -0.19
CLN6-216ENST00000636876 PTHP01270 115 aa13.89□□□□□ -0.19
CLN6-216ENST00000636876 NAA10P41227 235 aaPredicted RBP13.89□□□□□ -0.19
CLN6-216ENST00000636876 TMED1Q13445 227 aa13.89□□□□□ -0.19
CLN6-216ENST00000636876 CCDC92Q53HC0 331 aaPredicted RBP13.89□□□□□ -0.19
CLN6-216ENST00000636876 ZNF787Q6DD87 383 aa13.89□□□□□ -0.19
CLN6-216ENST00000636876 ZNF774Q6NX45 483 aa13.89□□□□□ -0.19
CLN6-216ENST00000636876 CFAP77Q6ZQR2 320 aa13.89□□□□□ -0.19
CLN6-216ENST00000636876 VASH1Q7L8A9 365 aaPredicted RBP13.89□□□□□ -0.19
CLN6-216ENST00000636876 SHFQ7M4L6 423 aa13.89□□□□□ -0.19
CLN6-216ENST00000636876 SLC16A9Q7RTY1 509 aa13.89□□□□□ -0.19
CLN6-216ENST00000636876 ALDH16A1Q8IZ83 802 aa13.89□□□□□ -0.19
CLN6-216ENST00000636876 C8orf59Q8N0T1 100 aaPredicted RBP13.89□□□□□ -0.19
CLN6-216ENST00000636876 CPEB3Q8NE35 698 aaKnown RBP13.89□□□□□ -0.19
CLN6-216ENST00000636876 Q96MT0 163 aa13.89□□□□□ -0.19
CLN6-216ENST00000636876 C1orf198Q9H425 327 aa13.89□□□□□ -0.19
CLN6-216ENST00000636876 HSPE1-MOB4S4R3N1 261 aa13.89□□□□□ -0.19
CLN6-216ENST00000636876 LRBAP50851 2863 aa13.89□□□□□ -0.19
CLN6-216ENST00000636876 PLCE1Q9P212 2302 aa13.89□□□□□ -0.19
CLN6-216ENST00000636876 ABCA12Q86UK0 2595 aa13.88□□□□□ -0.19
CLN6-216ENST00000636876 DOK2O60496 412 aa13.88□□□□□ -0.19
CLN6-216ENST00000636876 WBP4O75554 376 aaKnown RBP13.88□□□□□ -0.19
CLN6-216ENST00000636876 CD3EP07766 207 aa13.88□□□□□ -0.19
CLN6-216ENST00000636876 MRPL3P09001 348 aaKnown RBP13.88□□□□□ -0.19
CLN6-216ENST00000636876 COX5BP10606 129 aa13.88□□□□□ -0.19
CLN6-216ENST00000636876 APEX1P27695 318 aaKnown RBP13.88□□□□□ -0.19
CLN6-216ENST00000636876 ISL1P61371 349 aa13.88□□□□□ -0.19
CLN6-216ENST00000636876 NAAAQ02083 359 aa13.88□□□□□ -0.19
CLN6-216ENST00000636876 RAB35Q15286 201 aa13.88□□□□□ -0.19
CLN6-216ENST00000636876 DPY19L4Q7Z388 723 aa13.88□□□□□ -0.19
CLN6-216ENST00000636876 SLC30A7Q8NEW0 376 aa13.88□□□□□ -0.19
CLN6-216ENST00000636876 IL17RDQ8NFM7 739 aa13.88□□□□□ -0.19
CLN6-216ENST00000636876 APH1BQ8WW43 257 aa13.88□□□□□ -0.19
CLN6-216ENST00000636876 MARVELD3Q96A59 401 aa13.88□□□□□ -0.19
CLN6-216ENST00000636876 C14orf79Q96F83 325 aa13.88□□□□□ -0.19
CLN6-216ENST00000636876 MAP6Q96JE9 813 aa13.88□□□□□ -0.19
CLN6-216ENST00000636876 HS3ST6Q96QI5 342 aa13.88□□□□□ -0.19
CLN6-216ENST00000636876 CNN2Q99439 309 aaKnown RBP13.88□□□□□ -0.19
CLN6-216ENST00000636876 KCNS3Q9BQ31 491 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms