RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 LOC107986453A0A1B0GWG9 222 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 EEF1E1-BLOC1S5C9J1V9 151 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 ZNF354AO60765 605 aaPredicted RBP12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 HLA-AP01891 365 aaKnown RBP12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 CD1AP06126 327 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 CD2P06729 351 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 AKR1C4P17516 323 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 MRPS10P82664 201 aaKnown RBP12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 FOXK1P85037 733 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 DEFA5Q01523 94 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 POU3F1Q03052 451 aaPredicted RBP12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 GK2Q14410 553 aaPredicted RBP12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 INPP5JQ15735 1006 aaPredicted RBP12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 RSPO4Q2I0M5 234 aaPredicted RBP12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 ZNF660Q6AZW8 331 aaPredicted RBP12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 RGS7BPQ6MZT1 257 aaPredicted RBP12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 GPAT4Q86UL3 456 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 SLC43A2Q8N370 569 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 OR6N1Q8NGY5 312 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 ADIPOR1Q96A54 375 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 WBP1Q96G27 269 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 C5orf34Q96MH7 638 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 CMTM3Q96MX0 182 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 SOX7Q9BT81 388 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 FBRSQ9HAH7 460 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 ZC4H2Q9NQZ6 224 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 A0A1W2PPC4 97 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 RHPN2P1A8MT19 583 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 SNRPGP15A8MWD9 76 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 ZNF736B4DX44 427 aaPredicted RBP12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 HOXD4P09016 255 aaPredicted RBP12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 FOLR1P15328 257 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 CSNK1EP49674 416 aaKnown RBP12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 BLKP51451 505 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 PRKXP51817 358 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 LUMP51884 338 aaPredicted RBP12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 FBXW4P57775 412 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 CXADRP78310 365 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 EGR3Q06889 387 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 EBPQ15125 230 aaKnown RBP12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 CARD17Q5XLA6 110 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 C12orf45Q8N5I9 185 aaPredicted RBP12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 TEX51A0A1B0GUA7 166 aa12.58□□□□□ -0.4
CACNA1A-228ENST00000636610 C13orf42A0A1B0GVH6 325 aa12.58□□□□□ -0.4
CACNA1A-228ENST00000636610 SLC22A23A1A5C7 686 aa12.58□□□□□ -0.4
CACNA1A-228ENST00000636610 MFSD2BA6NFX1 497 aa12.58□□□□□ -0.4
CACNA1A-228ENST00000636610 C2CD4DB7Z1M9 353 aa12.58□□□□□ -0.4
CACNA1A-228ENST00000636610 IL5P05113 134 aa12.58□□□□□ -0.4
CACNA1A-228ENST00000636610 ZNF823P16415 610 aa12.58□□□□□ -0.4
CACNA1A-228ENST00000636610 PI3P19957 117 aa12.58□□□□□ -0.4
CACNA1A-228ENST00000636610 SERTAD2Q14140 314 aa12.58□□□□□ -0.4
CACNA1A-228ENST00000636610 ISXQ2M1V0 245 aa12.58□□□□□ -0.4
CACNA1A-228ENST00000636610 ARSKQ6UWY0 536 aa12.58□□□□□ -0.4
CACNA1A-228ENST00000636610 UNQ6126/PRO20091Q6UXV3 157 aa12.58□□□□□ -0.4
CACNA1A-228ENST00000636610 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.58□□□□□ -0.4
CACNA1A-228ENST00000636610 SLC41A2Q96JW4 573 aa12.58□□□□□ -0.4
CACNA1A-228ENST00000636610 SLC46A1Q96NT5 459 aa12.58□□□□□ -0.4
CACNA1A-228ENST00000636610 TWSG1Q9GZX9 223 aa12.58□□□□□ -0.4
CACNA1A-228ENST00000636610 ADAM19Q9H013 955 aa12.58□□□□□ -0.4
CACNA1A-228ENST00000636610 SEC61A2Q9H9S3 476 aa12.58□□□□□ -0.4
CACNA1A-228ENST00000636610 KLK13Q9UKR3 277 aa12.58□□□□□ -0.4
CACNA1A-228ENST00000636610 RNF215Q9Y6U7 377 aa12.58□□□□□ -0.4
CACNA1A-228ENST00000636610 PMPCAQ10713 525 aa12.58□□□□□ -0.4
CACNA1A-228ENST00000636610 GLT8D1Q68CQ7 371 aa12.58□□□□□ -0.4
CACNA1A-228ENST00000636610 EID2Q8N6I1 236 aa12.58□□□□□ -0.4
CACNA1A-228ENST00000636610 OR1L3Q8NH93 324 aa12.58□□□□□ -0.4
CACNA1A-228ENST00000636610 ZNF471Q9BX82 626 aaPredicted RBP12.58□□□□□ -0.4
CACNA1A-228ENST00000636610 EXOSC3Q9NQT5 275 aaKnown RBP12.58□□□□□ -0.4
CACNA1A-228ENST00000636610 DCNP07585 359 aaKnown RBP12.57□□□□□ -0.4
CACNA1A-228ENST00000636610 GNB3P16520 340 aa12.57□□□□□ -0.4
CACNA1A-228ENST00000636610 M6PRP20645 277 aa12.57□□□□□ -0.4
CACNA1A-228ENST00000636610 C4BPBP20851 252 aa12.57□□□□□ -0.4
CACNA1A-228ENST00000636610 GMFBP60983 142 aa12.57□□□□□ -0.4
CACNA1A-228ENST00000636610 DHRS2Q13268 280 aa12.57□□□□□ -0.4
CACNA1A-228ENST00000636610 CCINQ13939 588 aa12.57□□□□□ -0.4
CACNA1A-228ENST00000636610 ATPAF1Q5TC12 328 aaPredicted RBP12.57□□□□□ -0.4
CACNA1A-228ENST00000636610 OR13C9Q8NGT0 318 aa12.57□□□□□ -0.4
CACNA1A-228ENST00000636610 RNF128Q8TEB7 428 aa12.57□□□□□ -0.4
CACNA1A-228ENST00000636610 EMC3Q9P0I2 261 aa12.57□□□□□ -0.4
CACNA1A-228ENST00000636610 MRTO4Q9UKD2 239 aaKnown RBP12.57□□□□□ -0.4
CACNA1A-228ENST00000636610 SESN1Q9Y6P5 492 aa12.57□□□□□ -0.4
CACNA1A-228ENST00000636610 AHSA1O95433 338 aa12.57□□□□□ -0.4
CACNA1A-228ENST00000636610 LDOC1O95751 146 aaPredicted RBP12.57□□□□□ -0.4
CACNA1A-228ENST00000636610 PGCP20142 388 aa12.57□□□□□ -0.4
CACNA1A-228ENST00000636610 LTBRP36941 435 aa12.57□□□□□ -0.4
CACNA1A-228ENST00000636610 GABRA4P48169 554 aa12.57□□□□□ -0.4
CACNA1A-228ENST00000636610 CAPZA1P52907 286 aa12.57□□□□□ -0.4
CACNA1A-228ENST00000636610 GLO1Q04760 184 aa12.57□□□□□ -0.4
CACNA1A-228ENST00000636610 LY6G6FQ5SQ64 297 aa12.57□□□□□ -0.4
CACNA1A-228ENST00000636610 OR52N4Q8NGI2 321 aa12.57□□□□□ -0.4
CACNA1A-228ENST00000636610 OR2I1PQ8NGU4 316 aa12.57□□□□□ -0.4
CACNA1A-228ENST00000636610 ADAMTS18Q8TE60 1221 aa12.57□□□□□ -0.4
CACNA1A-228ENST00000636610 SCARB1Q8WTV0 552 aa12.57□□□□□ -0.4
CACNA1A-228ENST00000636610 NPRL2Q8WTW4 380 aa12.57□□□□□ -0.4
CACNA1A-228ENST00000636610 SLC7A5P2Q9GIP4 190 aa12.57□□□□□ -0.4
CACNA1A-228ENST00000636610 LAT2Q9GZY6 243 aa12.57□□□□□ -0.4
CACNA1A-228ENST00000636610 EPHA6Q9UF33 1036 aa12.57□□□□□ -0.4
CACNA1A-228ENST00000636610 TRAV14DV4A0A0A6YYC5 116 aa12.56□□□□□ -0.4
CACNA1A-228ENST00000636610 IGLV1-36A0A0B4J1U3 117 aa12.56□□□□□ -0.4
CACNA1A-228ENST00000636610 A0A1W2PPC1 479 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms