RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 F8A1P23610 371 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 AK4P27144 223 aaPredicted RBP0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 GCAP28676 217 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 PBLDP30039 288 aaPredicted RBP0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 HOXA9P31269 272 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 CA5AP35218 305 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 ADRA1AP35348 466 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 HPCAL1P37235 193 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 CTRLP40313 264 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 GLP1RP43220 463 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 KLK7P49862 253 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 DAP3P51398 398 aaKnown RBP0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 TPMTP51580 245 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 PRKXP51817 358 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 SUCLG1P53597 346 aaKnown RBP0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 AP3M2P53677 418 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 PLA2G16P53816 162 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 RIPPLY3P57055 190 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 MAP3K7CLP57077 242 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 LINC00315P59091 139 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 TAS2R19P59542 299 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 KRTAP10-10P60014 251 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 POLR2FP61218 127 aaKnown RBP0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 RPS14P62263 151 aaKnown RBP0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 ACTA2P62736 377 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 ACTC1P68032 377 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 IL1RL1Q01638 556 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 PAX5Q02548 391 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 RIPPLY1Q0D2K3 151 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 EGFEM1PQ0D2K5 195 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 PJVKQ0ZLH3 352 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 SMARCB1Q12824 385 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 RAB40BQ12829 278 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 CDC20Q12834 499 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 DAZ2Q13117 558 aaKnown RBP0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 SLAQ13239 276 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 EBI3Q14213 229 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 CST6Q15828 149 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 ATP6AP1Q15904 470 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 INAQ16352 499 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 SLC5A12Q1EHB4 618 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 NADK2Q4G0N4 442 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 TP53I3Q53FA7 332 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 BOLA3Q53S33 107 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 C10orf120Q5SQS8 335 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 C1orf220Q5T0J3 134 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 TSPO2Q5TGU0 170 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 ZNF691Q5VV52 312 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 SLC8B1Q6J4K2 584 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 AFTPHQ6ULP2 937 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 UNC5DQ6UXZ4 953 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 SYT10Q6XYQ8 523 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 ZFP2Q6ZN57 461 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 RFLNAQ6ZTI6 216 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 CLEC20AQ6ZU45 233 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 FAM183BPQ6ZVS7 135 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 GDPD3Q7L5L3 318 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 NIPA1Q7RTP0 329 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 ANKRD37Q7Z713 158 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 SCD5Q86SK9 330 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 SYVN1Q86TM6 617 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 SLC26A11Q86WA9 606 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 RALGPS2Q86X27 583 aaPredicted RBP0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 MMAAQ8IVH4 418 aaKnown RBP0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 SLC35F2Q8IXU6 374 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 RPRMLQ8N4K4 120 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 KIR3DL3Q8N743 410 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 TMEM161BQ8NDZ6 487 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 DUSP18Q8NEJ0 188 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 OR5AU1Q8NGC0 362 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 OR51G1Q8NGK1 321 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 OR5L2Q8NGL0 311 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 OR2L8Q8NGY9 312 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 OR56B4Q8NH76 319 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 OR9G1Q8NH87 305 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 UBA3Q8TBC4 463 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 SPPL2BQ8TCT7 592 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 BLOC1S5Q8TDH9 187 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 LMX1AQ8TE12 382 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 SCFD1Q8WVM8 642 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 CTNNBL1Q8WYA6 563 aaPredicted RBP0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 ARPC1AQ92747 370 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 FAM104AQ969W3 186 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 CCDC127Q96BQ5 260 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 SEC22AQ96IW7 307 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 C8orf76Q96K31 380 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 C12orf66Q96MD2 445 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 TTC25Q96NG3 672 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 OR2M2Q96R28 347 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 RIT2Q99578 217 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 MCHR1Q99705 422 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 KLHDC3Q9BQ90 382 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 TCHPQ9BT92 498 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 SLC17A9Q9BYT1 436 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 ACTR6Q9GZN1 396 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 IFI27L2Q9H2X8 130 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 RBKSQ9H477 322 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 RNF167Q9H6Y7 350 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 WDR76Q9H967 626 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 CALHM2Q9HA72 323 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms