RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 C5orf34Q96MH7 638 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 MESP1Q9BRJ9 268 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 MRI1Q9BV20 369 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 COMMD4Q9H0A8 199 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 SACM1LQ9NTJ5 587 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 IKZF2Q9UKS7 526 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 LOXL2Q9Y4K0 774 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 B3GALT1Q9Y5Z6 326 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 SHISA3A0PJX4 238 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 TVP23AA6NH52 213 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 LIPT2A6NK58 231 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 MS4A18H0YCH9 400 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 H7C1C5 153 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 ZNF593O00488 134 aaPredicted RBP6.41□□□□□ -1.38
BRCA1-230ENST00000634433 SLC16A7O60669 478 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 FZD7O75084 574 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 SLC2A2P11168 524 aaPredicted RBP6.41□□□□□ -1.38
BRCA1-230ENST00000634433 PSMB10P40306 273 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 INPP1P49441 399 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 GFRA1P56159 465 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 LCN6P62502 163 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 GLO1Q04760 184 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 DBPQ10586 325 aaPredicted RBP6.41□□□□□ -1.38
BRCA1-230ENST00000634433 ASAH1Q13510 395 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 IL18Q14116 193 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 CSRP2Q16527 193 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 MS4A18Q3C1V0 323 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 CLVS2Q5SYC1 327 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 LIPNQ5VXI9 398 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 ARSKQ6UWY0 536 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 GDPD3Q7L5L3 318 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 RFLNBQ8N5W9 214 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 FADS6Q8N9I5 356 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 OTOSQ8NHW6 89 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 NSMAFQ92636 917 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 TTTY10Q9BZA0 68 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 SLC22A4Q9H015 551 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 ZCCHC4Q9H5U6 513 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 PPP1R3EQ9H7J1 279 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 SCPEP1Q9HB40 452 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 CYSLTR2Q9NS75 346 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 MRM2Q9UI43 246 aaKnown RBP6.41□□□□□ -1.38
BRCA1-230ENST00000634433 RASD1Q9Y272 281 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 HDGFL3Q9Y3E1 203 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 HS3ST3B1Q9Y662 390 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 A0A1W2PNV4 684 aa6.4□□□□□ -1.38
BRCA1-230ENST00000634433 TMEM212A6NML5 194 aa6.4□□□□□ -1.38
BRCA1-230ENST00000634433 DCTN6O00399 190 aa6.4□□□□□ -1.38
BRCA1-230ENST00000634433 SNPHO15079 494 aa6.4□□□□□ -1.38
BRCA1-230ENST00000634433 MAGEB4O15481 346 aaPredicted RBP6.4□□□□□ -1.38
BRCA1-230ENST00000634433 AKR7A2O43488 359 aa6.4□□□□□ -1.38
BRCA1-230ENST00000634433 KHDRBS3O75525 346 aaKnown RBP6.4□□□□□ -1.38
BRCA1-230ENST00000634433 STK17BO94768 372 aa6.4□□□□□ -1.38
BRCA1-230ENST00000634433 RAF1P04049 648 aa6.4□□□□□ -1.38
BRCA1-230ENST00000634433 ZNF823P16415 610 aa6.4□□□□□ -1.38
BRCA1-230ENST00000634433 SRMP19623 302 aa6.4□□□□□ -1.38
BRCA1-230ENST00000634433 NPR2P20594 1047 aa6.4□□□□□ -1.38
BRCA1-230ENST00000634433 POLR2GP62487 172 aaKnown RBP eCLIP6.4□□□□□ -1.38
BRCA1-230ENST00000634433 HSF1Q00613 529 aa6.4□□□□□ -1.38
BRCA1-230ENST00000634433 SELENBP1Q13228 472 aa6.4□□□□□ -1.38
BRCA1-230ENST00000634433 SGCAQ16586 387 aa6.4□□□□□ -1.38
BRCA1-230ENST00000634433 BAK1Q16611 211 aa6.4□□□□□ -1.38
BRCA1-230ENST00000634433 PLA2G2CQ5R387 149 aa6.4□□□□□ -1.38
BRCA1-230ENST00000634433 HACD4Q5VWC8 232 aa6.4□□□□□ -1.38
BRCA1-230ENST00000634433 BICRALQ6AI39 1079 aa6.4□□□□□ -1.38
BRCA1-230ENST00000634433 IL20RBQ6UXL0 311 aa6.4□□□□□ -1.38
BRCA1-230ENST00000634433 BAIAP2L2Q6UXY1 529 aa6.4□□□□□ -1.38
BRCA1-230ENST00000634433 SLC35D2Q76EJ3 337 aa6.4□□□□□ -1.38
BRCA1-230ENST00000634433 DPY19L4Q7Z388 723 aa6.4□□□□□ -1.38
BRCA1-230ENST00000634433 RPS19BP1Q86WX3 136 aaKnown RBP6.4□□□□□ -1.38
BRCA1-230ENST00000634433 PLCZ1Q86YW0 608 aa6.4□□□□□ -1.38
BRCA1-230ENST00000634433 Q8N402 240 aa6.4□□□□□ -1.38
BRCA1-230ENST00000634433 TMEM156Q8N614 296 aa6.4□□□□□ -1.38
BRCA1-230ENST00000634433 ASB10Q8WXI3 467 aa6.4□□□□□ -1.38
BRCA1-230ENST00000634433 DDA1Q9BW61 102 aa6.4□□□□□ -1.38
BRCA1-230ENST00000634433 CHODLQ9H9P2 273 aa6.4□□□□□ -1.38
BRCA1-230ENST00000634433 PISDQ9UG56 409 aa6.4□□□□□ -1.38
BRCA1-230ENST00000634433 IGLV1-36A0A0B4J1U3 117 aa6.4□□□□□ -1.39
BRCA1-230ENST00000634433 C4orf47A7E2U8 309 aa6.4□□□□□ -1.39
BRCA1-230ENST00000634433 C1QTNF9BB2RNN3 333 aa6.4□□□□□ -1.39
BRCA1-230ENST00000634433 UPK3AO75631 287 aa6.4□□□□□ -1.39
BRCA1-230ENST00000634433 RPP14O95059 124 aaKnown RBP6.4□□□□□ -1.39
BRCA1-230ENST00000634433 ABHD16AO95870 558 aa6.4□□□□□ -1.39
BRCA1-230ENST00000634433 SCGB1D1O95968 90 aa6.4□□□□□ -1.39
BRCA1-230ENST00000634433 CSF3P09919 207 aa6.4□□□□□ -1.39
BRCA1-230ENST00000634433 OR8G3PP0DMU2 310 aa6.4□□□□□ -1.39
BRCA1-230ENST00000634433 AZGP1P25311 298 aaKnown RBP6.4□□□□□ -1.39
BRCA1-230ENST00000634433 RBMS1P29558 406 aaKnown RBP6.4□□□□□ -1.39
BRCA1-230ENST00000634433 NUP62P37198 522 aaPredicted RBP6.4□□□□□ -1.39
BRCA1-230ENST00000634433 RPS11P62280 158 aaKnown RBP eCLIP6.4□□□□□ -1.39
BRCA1-230ENST00000634433 PITPNAQ00169 270 aa6.4□□□□□ -1.39
BRCA1-230ENST00000634433 INSM1Q01101 510 aaPredicted RBP6.4□□□□□ -1.39
BRCA1-230ENST00000634433 FAM27D1Q5T7N8 215 aa6.4□□□□□ -1.39
BRCA1-230ENST00000634433 SLC22A10Q63ZE4 541 aa6.4□□□□□ -1.39
BRCA1-230ENST00000634433 LYPD4Q6UWN0 246 aa6.4□□□□□ -1.39
BRCA1-230ENST00000634433 ZNF679Q8IYX0 411 aa6.4□□□□□ -1.39
BRCA1-230ENST00000634433 CADM3Q8N126 398 aa6.4□□□□□ -1.39
BRCA1-230ENST00000634433 ARMC10Q8N2F6 343 aa6.4□□□□□ -1.39
BRCA1-230ENST00000634433 ZNF676Q8N7Q3 588 aa6.4□□□□□ -1.39
BRCA1-230ENST00000634433 NLGN4YQ8NFZ3 816 aaPredicted RBP6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms