RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 SLC46A1Q96NT5 459 aa15.85■□□□□ 0.13
PCF11-207ENST00000624931 CDCP1Q9H5V8 836 aa15.85■□□□□ 0.13
PCF11-207ENST00000624931 MYOZ1Q9NP98 299 aaPredicted RBP15.85■□□□□ 0.13
PCF11-207ENST00000624931 PTRH2Q9Y3E5 179 aaKnown RBP15.85■□□□□ 0.13
PCF11-207ENST00000624931 SDK2Q58EX2 2172 aa15.85■□□□□ 0.13
PCF11-207ENST00000624931 A0A0D9SG52 128 aa15.84■□□□□ 0.13
PCF11-207ENST00000624931 ARPC5O15511 151 aa15.84■□□□□ 0.13
PCF11-207ENST00000624931 UPK3AO75631 287 aa15.84■□□□□ 0.13
PCF11-207ENST00000624931 UBBP0CG47 229 aa15.84■□□□□ 0.13
PCF11-207ENST00000624931 UBCP0CG48 685 aaKnown RBP15.84■□□□□ 0.13
PCF11-207ENST00000624931 VSIG10L2P0DP72 767 aa15.84■□□□□ 0.13
PCF11-207ENST00000624931 RPS18P62269 152 aaKnown RBP15.84■□□□□ 0.13
PCF11-207ENST00000624931 RPS27AP62979 156 aaKnown RBP15.84■□□□□ 0.13
PCF11-207ENST00000624931 UBA52P62987 128 aaKnown RBP15.84■□□□□ 0.13
PCF11-207ENST00000624931 NFAM1Q8NET5 270 aaPredicted RBP15.84■□□□□ 0.13
PCF11-207ENST00000624931 OR1N1Q8NGS0 311 aa15.84■□□□□ 0.13
PCF11-207ENST00000624931 GPR148Q8TDV2 347 aa15.84■□□□□ 0.13
PCF11-207ENST00000624931 ADIPOR1Q96A54 375 aa15.84■□□□□ 0.13
PCF11-207ENST00000624931 SMAD5Q99717 465 aaKnown RBP15.84■□□□□ 0.13
PCF11-207ENST00000624931 DDA1Q9BW61 102 aa15.84■□□□□ 0.13
PCF11-207ENST00000624931 SLC6A15Q9H2J7 730 aa15.84■□□□□ 0.13
PCF11-207ENST00000624931 RFPL4AA6NLU0 287 aa15.83■□□□□ 0.13
PCF11-207ENST00000624931 RFPL4AL1F8VTS6 287 aa15.83■□□□□ 0.13
PCF11-207ENST00000624931 ZNF292O60281 2723 aa15.83■□□□□ 0.13
PCF11-207ENST00000624931 KLF7O75840 302 aaPredicted RBP15.83■□□□□ 0.13
PCF11-207ENST00000624931 CD14P08571 375 aa15.83■□□□□ 0.13
PCF11-207ENST00000624931 LEG1Q6P5S2 330 aa15.83■□□□□ 0.13
PCF11-207ENST00000624931 TMEM205Q6UW68 189 aa15.83■□□□□ 0.13
PCF11-207ENST00000624931 C6orf15Q6UXA7 325 aaPredicted RBP15.83■□□□□ 0.13
PCF11-207ENST00000624931 C16orf47Q6ZP98 133 aaPredicted RBP15.83■□□□□ 0.13
PCF11-207ENST00000624931 CPEB2Q7Z5Q1 589 aaKnown RBP15.83■□□□□ 0.13
PCF11-207ENST00000624931 TMPRSS12Q86WS5 348 aa15.83■□□□□ 0.13
PCF11-207ENST00000624931 EXD3Q8N9H8 876 aa15.83■□□□□ 0.13
PCF11-207ENST00000624931 OR5T2Q8NGG2 359 aa15.83■□□□□ 0.13
PCF11-207ENST00000624931 CT55Q8WUE5 264 aa15.83■□□□□ 0.13
PCF11-207ENST00000624931 RNF166Q96A37 237 aaPredicted RBP15.83■□□□□ 0.13
PCF11-207ENST00000624931 WWTR1Q9GZV5 400 aa15.83■□□□□ 0.13
PCF11-207ENST00000624931 C1orf198Q9H425 327 aa15.83■□□□□ 0.13
PCF11-207ENST00000624931 WDR54Q9H977 334 aa15.83■□□□□ 0.13
PCF11-207ENST00000624931 COPS7AQ9UBW8 275 aa15.83■□□□□ 0.13
PCF11-207ENST00000624931 ZNF107Q9UII5 783 aaPredicted RBP15.83■□□□□ 0.13
PCF11-207ENST00000624931 HIF3AQ9Y2N7 669 aa15.83■□□□□ 0.13
PCF11-207ENST00000624931 ADAM18Q9Y3Q7 739 aa15.83■□□□□ 0.13
PCF11-207ENST00000624931 SLC22A23A1A5C7 686 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 GGT3PA6NGU5 568 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 CDC40O60508 579 aaKnown RBP eCLIP15.82■□□□□ 0.122e-10■■■■□ 21.6
PCF11-207ENST00000624931 DKK1O94907 266 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 PMS2P2O95744 297 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 LPLP06858 475 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 MGMTP16455 207 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 CLDN12P56749 244 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 ACTBP60709 375 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 ERVK-25P63136 954 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 ACTG1P63261 375 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 CLVS2Q5SYC1 327 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 LIPNQ5VXI9 398 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 CDC20BQ86Y33 519 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 STPG2Q8N412 459 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 OR4C16Q8NGL9 310 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 TNFAIP8L1Q8WVP5 186 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 GCDHQ92947 438 aaPredicted RBP15.82■□□□□ 0.12
PCF11-207ENST00000624931 CXorf58Q96LI9 332 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 SLC25A21Q9BQT8 299 aaPredicted RBP15.82■□□□□ 0.12
PCF11-207ENST00000624931 SLCO5A1Q9H2Y9 848 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 FXYD6-FXYD2A0A087WZ82 144 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 SERINC4A6NH21 518 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 H3BUI4 141 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 ABHD16AO95870 558 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 CSTAP01040 98 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 RLN1P04808 185 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 SDHAP31040 664 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 PRSS3P35030 304 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 PPICP45877 212 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 NR0B1P51843 470 aaKnown RBP15.82■□□□□ 0.12
PCF11-207ENST00000624931 LPCAT3Q6P1A2 487 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 FDX2Q6P4F2 183 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 ALKAL2Q6UX46 152 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 APCDD1LQ8NCL9 501 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 THAP3Q8WTV1 239 aaPredicted RBP15.82■□□□□ 0.12
PCF11-207ENST00000624931 ZNRF4Q8WWF5 429 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 SPRY4Q9C004 299 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 MFFQ9GZY8 342 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 FXYD6Q9H0Q3 95 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 COQ3Q9NZJ6 369 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 FRRS1LQ9P0K9 344 aa15.82■□□□□ 0.12
PCF11-207ENST00000624931 MRM2Q9UI43 246 aaKnown RBP15.82■□□□□ 0.12
PCF11-207ENST00000624931 NXT1Q9UKK6 140 aaKnown RBP15.82■□□□□ 0.12
PCF11-207ENST00000624931 RIF1Q5UIP0 2472 aaKnown RBP15.82■□□□□ 0.12
PCF11-207ENST00000624931 FRG2CA6NGY1 282 aa15.81■□□□□ 0.12
PCF11-207ENST00000624931 GOSR2O14653 212 aa15.81■□□□□ 0.12
PCF11-207ENST00000624931 TNFSF15O95150 251 aa15.81■□□□□ 0.12
PCF11-207ENST00000624931 HPP00738 406 aa15.81■□□□□ 0.12
PCF11-207ENST00000624931 CELA2AP08217 269 aa15.81■□□□□ 0.12
PCF11-207ENST00000624931 ZNF35P13682 527 aa15.81■□□□□ 0.12
PCF11-207ENST00000624931 NAT1P18440 290 aa15.81■□□□□ 0.12
PCF11-207ENST00000624931 ADRA2CP18825 462 aa15.81■□□□□ 0.12
PCF11-207ENST00000624931 CSRP1P21291 193 aaKnown RBP15.81■□□□□ 0.12
PCF11-207ENST00000624931 DBPQ10586 325 aaPredicted RBP15.81■□□□□ 0.12
PCF11-207ENST00000624931 NHLRC1Q6VVB1 395 aa15.81■□□□□ 0.12
PCF11-207ENST00000624931 ZNF454Q8N9F8 522 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms