RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 RYDENQ9NUL5 291 aaKnown RBP17.57■□□□□ 0.4
PCDHB11-202ENST00000624887 HPF1Q9NWY4 346 aa17.57■□□□□ 0.4
PCDHB11-202ENST00000624887 NUBP2Q9Y5Y2 271 aa17.57■□□□□ 0.4
PCDHB11-202ENST00000624887 SULT2B1O00204 365 aa17.56■□□□□ 0.4
PCDHB11-202ENST00000624887 TCRBP04435 133 aa17.56■□□□□ 0.4
PCDHB11-202ENST00000624887 H2BFMP0C1H6 154 aa17.56■□□□□ 0.4
PCDHB11-202ENST00000624887 DSCR4P56555 118 aaPredicted RBP17.56■□□□□ 0.4
PCDHB11-202ENST00000624887 RAB25P57735 213 aa17.56■□□□□ 0.4
PCDHB11-202ENST00000624887 MRPS10P82664 201 aaKnown RBP17.56■□□□□ 0.4
PCDHB11-202ENST00000624887 SNTB2Q13425 540 aaKnown RBP17.56■□□□□ 0.4
PCDHB11-202ENST00000624887 LRFN4Q6PJG9 635 aa17.56■□□□□ 0.4
PCDHB11-202ENST00000624887 C15orf40Q8WUR7 153 aa17.56■□□□□ 0.4
PCDHB11-202ENST00000624887 GNRHR2Q96P88 292 aa17.56■□□□□ 0.4
PCDHB11-202ENST00000624887 HHLA2Q9UM44 414 aa17.56■□□□□ 0.4
PCDHB11-202ENST00000624887 TMEM269A0A1B0GVZ9 245 aa17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 PMS2P2O95744 297 aa17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 ZNF43P17038 809 aa17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 IGFBP3P17936 291 aaPredicted RBP17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 FSTP19883 344 aa17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 ACHEP22303 614 aa17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 GIFP27352 417 aa17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 MMP16P51512 607 aa17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 RRAS2P62070 204 aaPredicted RBP17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 CD83Q01151 205 aa17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 ZNF704Q6ZNC4 412 aaPredicted RBP17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 PPP1R32Q7Z5V6 425 aa17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 TCTE3Q8IZS6 198 aa17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 OR1J4Q8NGS1 313 aa17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 OR52I2Q8NH67 350 aa17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 CAPSLQ8WWF8 208 aa17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 ZPBPQ9BS86 351 aa17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 CACNG6Q9BXT2 260 aa17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 CENPMQ9NSP4 180 aa17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 NUDT15Q9NV35 164 aa17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 CKLFQ9UBR5 152 aa17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 TCFL5Q9UL49 500 aa17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 KMT2EQ8IZD2 1858 aa17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 SLC17A2O00624 439 aa17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 RAMP1O60894 148 aa17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 KRT33AO76009 404 aa17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 ECDO95905 644 aaPredicted RBP17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 DHFRP00374 187 aa17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 ITGA5P08648 1049 aa17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 TIGD3Q6B0B8 471 aa17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 C6orf15Q6UXA7 325 aaPredicted RBP17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 FCAMRQ8WWV6 532 aa17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 GCDHQ92947 438 aaPredicted RBP17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 SLAMF6Q96DU3 332 aa17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 BEX2Q9BXY8 128 aa17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 STRADBQ9C0K7 418 aa17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 C1orf198Q9H425 327 aa17.55■□□□□ 0.4
PCDHB11-202ENST00000624887 LOC107986453A0A1B0GWG9 222 aa17.54■□□□□ 0.4
PCDHB11-202ENST00000624887 MASP2O00187 686 aa17.54■□□□□ 0.4
PCDHB11-202ENST00000624887 DCTDP32321 178 aa17.54■□□□□ 0.4
PCDHB11-202ENST00000624887 TAS2R20P59543 309 aa17.54■□□□□ 0.4
PCDHB11-202ENST00000624887 RPS18P62269 152 aaKnown RBP17.54■□□□□ 0.4
PCDHB11-202ENST00000624887 H3F3AP84243 136 aa17.54■□□□□ 0.4
PCDHB11-202ENST00000624887 FAM166AQ6J272 317 aa17.54■□□□□ 0.4
PCDHB11-202ENST00000624887 SLC25A47Q6Q0C1 308 aa17.54■□□□□ 0.4
PCDHB11-202ENST00000624887 OR51D1Q8NGF3 324 aa17.54■□□□□ 0.4
PCDHB11-202ENST00000624887 AKAP1Q92667 903 aaKnown RBP eCLIP17.54■□□□□ 0.4
PCDHB11-202ENST00000624887 A0A1W2PPL8 197 aa17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 ZIC3O60481 467 aa17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 MT-ND4P03905 459 aa17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 UBCP0CG48 685 aaKnown RBP17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 CD37P11049 281 aa17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 ICAM2P13598 275 aa17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 TCN2P20062 427 aa17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 PLA2G7Q13093 441 aa17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 RAB11BQ15907 218 aa17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 HIST3H3Q16695 136 aa17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 BCL2L15Q5TBC7 163 aa17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 TMEM244Q5VVB8 128 aa17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 RAB11FIP2Q7L804 512 aa17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 SCMH1Q96GD3 660 aa17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 SGCZQ96LD1 299 aa17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 ZNF275Q9NSD4 429 aaPredicted RBP17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 FAM206AQ9NX38 181 aa17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 TRAV6A0A075B6T7 132 aa17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 C7orf66A4D0T2 115 aa17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 ANKRD34BA5PLL1 514 aa17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 EIF1AYO14602 144 aaKnown RBP17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 XRCC3O43542 346 aa17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 GLSO94925 669 aaPredicted RBP17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 TMIGD3P0DMS9 266 aaPredicted RBP17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 KLK2P20151 261 aa17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 OTX2P32243 289 aa17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 AP3S2P59780 193 aa17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 CHAF1BQ13112 559 aa17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 ZNF468Q5VIY5 522 aaPredicted RBP17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 GLT8D1Q68CQ7 371 aa17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 ANKRD16Q6P6B7 361 aa17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 DNM1P46Q6ZS02 220 aa17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 TIPARPQ7Z3E1 657 aaKnown RBP17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 OR10S1Q8NGN2 331 aa17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 OR13C3Q8NGS6 347 aa17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 CT55Q8WUE5 264 aa17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 TMEM41AQ96HV5 264 aa17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 RNF170Q96K19 258 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms